MELO.jh031413.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031413.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionTSA1-like protein
Locationchr07: 16907568 .. 16907716 (-)
RNA-Seq ExpressionMELO.jh031413.1
SyntenyMELO.jh031413.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGAAAGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATGCGAGTTTCTGAGGCTCGACAATCTTACTCATGAATCCATGGTCGACCAAAGGATTTGGGAAGTGGAAGGAAATAATTGAGGAGTCAAAGAAGA

mRNA sequence

ATGAGGAAAGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATGCGAGTTTCTGAGGCTCGACAATCTTACTCATGAATCCATGGTCGACCAAAGGATTTGGGAAGTGGAAGGAAATAATTGAGGAGTCAAAGAAGA

Coding sequence (CDS)

ATGAGGAAAGAGATTGAGAGCAAGAACAAAGAATATGAGTTGCTCCAAAGTAAATGCGAGTTTCTGAGGCTCGACAATCTTACTCATGAATCCATGGTCGACCAAAGGATTTGGGAAGTGGAAGGAAATAATTGA

Protein sequence

MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVEGNN
Homology
BLAST of MELO.jh031413.1 vs. NCBI nr
Match: KAA0047373.1 (TSA1-like protein [Cucumis melo var. makuwa] >TYK14049.1 TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 62.4 bits (150), Expect = 3.41e-11
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYELLQSK EFLRLD+LTH+SMVD+   EV+
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVD 41

BLAST of MELO.jh031413.1 vs. NCBI nr
Match: KAA0048522.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.13e-10
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYE+LQSK EFLRLDNLTH+SMVDQ   EV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO.jh031413.1 vs. NCBI nr
Match: TYK28313.1 (TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 64.7 bits (156), Expect = 1.13e-10
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYE+LQSK EFLRLDNLTH+SMVDQ   EV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO.jh031413.1 vs. NCBI nr
Match: KAA0059517.1 (TSA1-like protein [Cucumis melo var. makuwa] >TYK14100.1 TSA1-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 60.8 bits (146), Expect = 2.63e-10
Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYE LQSK EFLRL NLTH+SMVDQ   EV+
Sbjct: 13 MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 53

BLAST of MELO.jh031413.1 vs. NCBI nr
Match: KAE8649201.1 (hypothetical protein Csa_014777 [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 4.14e-10
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYELLQSK EFLRLDNLTH+SMV+Q   EV+
Sbjct: 58 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 98

BLAST of MELO.jh031413.1 vs. ExPASy TrEMBL
Match: A0A5A7TUZ5 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00230 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.65e-11
Identity = 33/41 (80.49%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYELLQSK EFLRLD+LTH+SMVD+   EV+
Sbjct: 1  MRKEIESKNKEYELLQSKYEFLRLDSLTHDSMVDEDKIEVD 41

BLAST of MELO.jh031413.1 vs. ExPASy TrEMBL
Match: A0A5D3DX93 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G001380 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.50e-11
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYE+LQSK EFLRLDNLTH+SMVDQ   EV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO.jh031413.1 vs. ExPASy TrEMBL
Match: A0A5A7TYB0 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001430 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 5.50e-11
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYE+LQSK EFLRLDNLTH+SMVDQ   EV+
Sbjct: 1  MRKEIESKNKEYEILQSKYEFLRLDNLTHDSMVDQDKIEVD 41

BLAST of MELO.jh031413.1 vs. ExPASy TrEMBL
Match: A0A5A7UY16 (TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G00150 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 1.27e-10
Identity = 33/41 (80.49%), Postives = 35/41 (85.37%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYE LQSK EFLRL NLTH+SMVDQ   EV+
Sbjct: 13 MRKEIESKNKEYEFLQSKYEFLRLKNLTHKSMVDQDNIEVD 53

BLAST of MELO.jh031413.1 vs. ExPASy TrEMBL
Match: A0A0A0KYB9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.01e-10
Identity = 34/41 (82.93%), Postives = 37/41 (90.24%), Query Frame = 0

Query: 1  MRKEIESKNKEYELLQSKCEFLRLDNLTHESMVDQRIWEVE 41
          MRKEIESKNKEYELLQSK EFLRLDNLTH+SMV+Q   EV+
Sbjct: 52 MRKEIESKNKEYELLQSKYEFLRLDNLTHKSMVEQDKVEVD 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0047373.13.41e-1180.49TSA1-like protein [Cucumis melo var. makuwa] >TYK14049.1 TSA1-like protein [Cucu... [more]
KAA0048522.11.13e-1082.93TSA1-like protein [Cucumis melo var. makuwa][more]
TYK28313.11.13e-1082.93TSA1-like protein [Cucumis melo var. makuwa][more]
KAA0059517.12.63e-1080.49TSA1-like protein [Cucumis melo var. makuwa] >TYK14100.1 TSA1-like protein [Cucu... [more]
KAE8649201.14.14e-1082.93hypothetical protein Csa_014777 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7TUZ51.65e-1180.49TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold363G00... [more]
A0A5D3DX935.50e-1182.93TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold600G00... [more]
A0A5A7TYB05.50e-1182.93TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold61G001... [more]
A0A5A7UY161.27e-1080.49TSA1-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1193G0... [more]
A0A0A0KYB92.01e-1082.93Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051390 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031413.1.t1MELO.jh031413.1.t1mRNA