MELO.jh031377.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh031377.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionAmino acid permease 6
Locationchr07: 10981839 .. 10981986 (-)
RNA-Seq ExpressionMELO.jh031377.1
SyntenyMELO.jh031377.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAGGAAGTTTTGTTGGGTTTTAATTACTTGATCATGGTATATACTGCAGGATTTAACAATGTTAAATTTTGTGGGTTGGCTCAGTATGGTAATCTGGTTGGTGTTAACATTGGTTACACCATTACTGCCTCCATTAGCATGGTGTAA

mRNA sequence

TAAGGAAGTTTTGTTGGGTTTTAATTACTTGATCATGGTATATACTGCAGGATTTAACAATGTTAAATTTTGTGGGTTGGCTCAGTATGGTAATCTGGTTGGTGTTAACATTGGTTACACCATTACTGCCTCCATTAGCATGGTGTAA

Coding sequence (CDS)

ATGGTATATACTGCAGGATTTAACAATGTTAAATTTTGTGGGTTGGCTCAGTATGGTAATCTGGTTGGTGTTAACATTGGTTACACCATTACTGCCTCCATTAGCATGGTGTAA

Protein sequence

MVYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV
Homology
[Close]
BLAST of MELO.jh031377.1 vs. NCBI nr
Match: KAA0032537.1 (villin-4-like isoform X4 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 4.28e-13
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 98  VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 133

[Close]
BLAST of MELO.jh031377.1 vs. NCBI nr
Match: KAA0050422.1 (amino acid permease 6 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 9.48e-13
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 143 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 178

[Close]
BLAST of MELO.jh031377.1 vs. NCBI nr
Match: KAA0059909.1 (uncharacterized protein E6C27_scaffold108G002120 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.49e-12
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 367 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 402

[Close]
BLAST of MELO.jh031377.1 vs. NCBI nr
Match: TYK01158.1 (amino acid permease 6 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.49e-12
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 545 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 580

[Close]
BLAST of MELO.jh031377.1 vs. NCBI nr
Match: KAA0047162.1 (villin-4-like isoform X4 [Cucumis melo var. makuwa])

HSP 1 Score: 70.1 bits (170), Expect = 1.49e-12
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 545 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 580

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy Swiss-Prot
Match: P92934 (Amino acid permease 6 OS=Arabidopsis thaliana OX=3702 GN=AAP6 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.3e-06
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 6   GFNNVKFCGLAQYGNLVGVNIGYTITASISMV 38
           G   V+ CGLAQYGNL+G+ IGYTITASISMV
Sbjct: 113 GGRKVQLCGLAQYGNLIGITIGYTITASISMV 144

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy Swiss-Prot
Match: Q42400 (Amino acid permease 1 OS=Arabidopsis thaliana OX=3702 GN=AAP1 PE=1 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 6.4e-06
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 6   GFNNVKFCGLAQYGNLVGVNIGYTITASISMV 38
           G   V+ CG+AQYGNL+GV +GYTITASIS+V
Sbjct: 117 GGRKVQLCGVAQYGNLIGVTVGYTITASISLV 148

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy Swiss-Prot
Match: O80592 (Amino acid permease 8 OS=Arabidopsis thaliana OX=3702 GN=AAP8 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 4.2e-05
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 6   GFNNVKFCGLAQYGNLVGVNIGYTITASISMV 38
           G   V+ CG+AQY NLVGV IGYTITASIS+V
Sbjct: 108 GGKKVQLCGVAQYVNLVGVTIGYTITASISLV 139

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy TrEMBL
Match: A0A5A7ST58 (Villin-4-like isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold465G00490 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.07e-13
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 98  VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 133

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy TrEMBL
Match: A0A5A7U3K4 (Amino acid permease 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold175G00100 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 4.59e-13
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 143 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 178

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy TrEMBL
Match: A0A5A7V263 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold108G002120 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.19e-13
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 367 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 402

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy TrEMBL
Match: A0A5D3BQ26 (Amino acid permease 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00380 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.21e-13
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 545 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 580

[Close]
BLAST of MELO.jh031377.1 vs. ExPASy TrEMBL
Match: A0A5A7TUM2 (Villin-4-like isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold83G00340 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 7.21e-13
Identity = 34/36 (94.44%), Postives = 35/36 (97.22%), Query Frame = 0 

Query: 2   VYTAGFNNVKFCGLAQYGNLVGVNIGYTITASISMV 37
           VYTAG NNVKFCGLAQYGNLVGV+IGYTITASISMV
Sbjct: 545 VYTAGGNNVKFCGLAQYGNLVGVSIGYTITASISMV 580

[Close]
BLAST of MELO.jh031377.1 vs. TAIR 10
Match: AT5G49630.1 (amino acid permease 6 )

HSP 1 Score: 52.4 bits (124), Expect = 9.2e-08
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 6   GFNNVKFCGLAQYGNLVGVNIGYTITASISMV 38
           G   V+ CGLAQYGNL+G+ IGYTITASISMV
Sbjct: 113 GGRKVQLCGLAQYGNLIGITIGYTITASISMV 144

[Close]
BLAST of MELO.jh031377.1 vs. TAIR 10
Match: AT1G58360.1 (amino acid permease 1 )

HSP 1 Score: 50.1 bits (118), Expect = 4.6e-07
Identity = 22/32 (68.75%), Postives = 27/32 (84.38%), Query Frame = 0 

Query: 6   GFNNVKFCGLAQYGNLVGVNIGYTITASISMV 38
           G   V+ CG+AQYGNL+GV +GYTITASIS+V
Sbjct: 117 GGRKVQLCGVAQYGNLIGVTVGYTITASISLV 148

[Close]
BLAST of MELO.jh031377.1 vs. TAIR 10
Match: AT1G10010.1 (amino acid permease 8 )

HSP 1 Score: 47.4 bits (111), Expect = 3.0e-06
Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 0 

Query: 6   GFNNVKFCGLAQYGNLVGVNIGYTITASISMV 38
           G   V+ CG+AQY NLVGV IGYTITASIS+V
Sbjct: 108 GGKKVQLCGVAQYVNLVGVTIGYTITASISLV 139

[Close]
BLAST of MELO.jh031377.1 vs. TAIR 10
Match: AT5G63850.1 (amino acid permease 4 )

HSP 1 Score: 40.4 bits (93), Expect = 3.6e-04
Identity = 18/27 (66.67%), Postives = 21/27 (77.78%), Query Frame = 0 

Query: 11  KFCGLAQYGNLVGVNIGYTITASISMV 38
           K CGL QY NL G+ +GYTI ASISM+
Sbjct: 104 KICGLIQYLNLFGITVGYTIAASISMM 130

[Close]
BLAST of MELO.jh031377.1 vs. TAIR 10
Match: AT5G09220.1 (amino acid permease 2 )

HSP 1 Score: 40.0 bits (92), Expect = 4.7e-04
Identity = 19/27 (70.37%), Postives = 21/27 (77.78%), Query Frame = 0 

Query: 11  KFCGLAQYGNLVGVNIGYTITASISMV 38
           K CGL QY NL G+ IGYTI ASISM+
Sbjct: 131 KICGLIQYLNLFGIAIGYTIAASISMM 157

The following BLAST results are available for this feature:
BLAST of MELO.jh031377.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0032537.14.28e-1394.44villin-4-like isoform X4 [Cucumis melo var. makuwa][more]
KAA0050422.19.48e-1394.44amino acid permease 6 [Cucumis melo var. makuwa][more]
KAA0059909.11.49e-1294.44uncharacterized protein E6C27_scaffold108G002120 [Cucumis melo var. makuwa][more]
TYK01158.11.49e-1294.44amino acid permease 6 [Cucumis melo var. makuwa][more]
KAA0047162.11.49e-1294.44villin-4-like isoform X4 [Cucumis melo var. makuwa][more]
BLAST of MELO.jh031377.1 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P929341.3e-0675.00Amino acid permease 6 OS=Arabidopsis thaliana OX=3702 GN=AAP6 PE=1 SV=1[more]
Q424006.4e-0668.75Amino acid permease 1 OS=Arabidopsis thaliana OX=3702 GN=AAP1 PE=1 SV=1[more]
O805924.2e-0571.88Amino acid permease 8 OS=Arabidopsis thaliana OX=3702 GN=AAP8 PE=1 SV=1[more]
BLAST of MELO.jh031377.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7ST582.07e-1394.44Villin-4-like isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
A0A5A7U3K44.59e-1394.44Amino acid permease 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold17... [more]
A0A5A7V2637.19e-1394.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQ267.21e-1394.44Amino acid permease 6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold10... [more]
A0A5A7TUM27.21e-1394.44Villin-4-like isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol... [more]
BLAST of MELO.jh031377.1 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G49630.19.2e-0875.00amino acid permease 6 [more]
AT1G58360.14.6e-0768.75amino acid permease 1 [more]
AT1G10010.13.0e-0671.88amino acid permease 8 [more]
AT5G63850.13.6e-0466.67amino acid permease 4 [more]
AT5G09220.14.7e-0470.37amino acid permease 2 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh031377.1.t1MELO.jh031377.1.t1mRNA