MELO.jh030662.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030662.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionAcetyl-CoA carboxylase 1-like
Locationchr04: 4771930 .. 4772100 (+)
RNA-Seq ExpressionMELO.jh030662.1
SyntenyMELO.jh030662.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAAAAAGGGGAAGACCTTTAATAACACTGGAGTGAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCCGCGATTAGTAACAAGCTAGAAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATGAAGGGTTCTCCACACCCAAGGTATACAAATATGA

mRNA sequence

ATGGTAAAAAAGGGGAAGACCTTTAATAACACTGGAGTGAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCCGCGATTAGTAACAAGCTAGAAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATGAAGGGTTCTCCACACCCAAGGTATACAAATATGA

Coding sequence (CDS)

ATGGTAAAAAAGGGGAAGACCTTTAATAACACTGGAGTGAAGCATAGAGTGAAGCGGTCGATTAAGGTGCCCGCGATTAGTAACAAGCTAGAAGATATGATGATTATTCATGGAGGAAATATGGCCAAAAGCCAATGA

Protein sequence

MVKKGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ
Homology
BLAST of MELO.jh030662.1 vs. NCBI nr
Match: TYK26778.1 (heat stress transcription factor A-2d-like [Cucumis melo var. makuwa])

HSP 1 Score: 77.4 bits (189), Expect = 4.05e-15
Identity = 38/42 (90.48%), Postives = 38/42 (90.48%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVKRSIKVP ISNKL DMMIIHGGNMAKSQ
Sbjct: 305 KGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKSQ 346

BLAST of MELO.jh030662.1 vs. NCBI nr
Match: KAA0051708.1 (acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 5.77e-15
Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVK SIKVP ISNKL DMMIIHGGNMAKSQ
Sbjct: 121 KGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 162

BLAST of MELO.jh030662.1 vs. NCBI nr
Match: KAA0042275.1 (transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 75.5 bits (184), Expect = 1.14e-14
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   MVKKGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           +++K K FNNT VKHRVKRSIKVP ISN+L DMMIIHGGNMAKSQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQ 185

BLAST of MELO.jh030662.1 vs. NCBI nr
Match: KAA0042207.1 (triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 74.3 bits (181), Expect = 5.17e-14
Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVK SIKVP ISNKL DMMIIHGGNMAKSQ
Sbjct: 302 KGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 343

BLAST of MELO.jh030662.1 vs. NCBI nr
Match: KAA0054890.1 (triacylglycerol lipase 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 73.2 bits (178), Expect = 8.10e-14
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVKR IKVP ISNKL D+MIIHGGNMAKSQ
Sbjct: 227 KGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKSQ 268

BLAST of MELO.jh030662.1 vs. ExPASy TrEMBL
Match: A0A5D3DTC4 (Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold124G00780 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 1.96e-15
Identity = 38/42 (90.48%), Postives = 38/42 (90.48%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVKRSIKVP ISNKL DMMIIHGGNMAKSQ
Sbjct: 305 KGKAFNNTRVKHRVKRSIKVPTISNKLADMMIIHGGNMAKSQ 346

BLAST of MELO.jh030662.1 vs. ExPASy TrEMBL
Match: A0A5A7U8V0 (Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G00940 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.79e-15
Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVK SIKVP ISNKL DMMIIHGGNMAKSQ
Sbjct: 121 KGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 162

BLAST of MELO.jh030662.1 vs. ExPASy TrEMBL
Match: A0A5A7TLF6 (Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00590 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 5.54e-15
Identity = 36/45 (80.00%), Postives = 40/45 (88.89%), Query Frame = 0

Query: 1   MVKKGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           +++K K FNNT VKHRVKRSIKVP ISN+L DMMIIHGGNMAKSQ
Sbjct: 141 LIRKEKAFNNTRVKHRVKRSIKVPTISNRLADMMIIHGGNMAKSQ 185

BLAST of MELO.jh030662.1 vs. ExPASy TrEMBL
Match: A0A5A7TKJ7 (Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold67G007180 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.50e-14
Identity = 37/42 (88.10%), Postives = 37/42 (88.10%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVK SIKVP ISNKL DMMIIHGGNMAKSQ
Sbjct: 302 KGKAFNNTRVKHRVKWSIKVPTISNKLADMMIIHGGNMAKSQ 343

BLAST of MELO.jh030662.1 vs. ExPASy TrEMBL
Match: A0A5A7UHW8 (Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold43052G00080 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 3.92e-14
Identity = 36/42 (85.71%), Postives = 37/42 (88.10%), Query Frame = 0

Query: 4   KGKTFNNTGVKHRVKRSIKVPAISNKLEDMMIIHGGNMAKSQ 45
           KGK FNNT VKHRVKR IKVP ISNKL D+MIIHGGNMAKSQ
Sbjct: 227 KGKAFNNTRVKHRVKRYIKVPTISNKLVDVMIIHGGNMAKSQ 268

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYK26778.14.05e-1590.48heat stress transcription factor A-2d-like [Cucumis melo var. makuwa][more]
KAA0051708.15.77e-1588.10acetyl-CoA carboxylase 1-like [Cucumis melo var. makuwa][more]
KAA0042275.11.14e-1480.00transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 [Cucumis melo var. ma... [more]
KAA0042207.15.17e-1488.10triacylglycerol lipase 1 isoform X2 [Cucumis melo var. makuwa][more]
KAA0054890.18.10e-1485.71triacylglycerol lipase 1-like [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3DTC41.96e-1590.48Heat stress transcription factor A-2d-like OS=Cucumis melo var. makuwa OX=119469... [more]
A0A5A7U8V02.79e-1588.10Acetyl-CoA carboxylase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
A0A5A7TLF65.54e-1580.00Transcriptional corepressor LEUNIG_HOMOLOG-like isoform X2 OS=Cucumis melo var. ... [more]
A0A5A7TKJ72.50e-1488.10Triacylglycerol lipase 1 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7UHW83.92e-1485.71Triacylglycerol lipase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_sc... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018872Zn-cluster domainPFAMPF10533Plant_zn_clustcoord: 14..32
e-value: 1.3E-6
score: 28.4

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh030662.1.t1MELO.jh030662.1.t1mRNA