MELO.jh030330.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTGATAGGAATGTTGGATATGTTCAGGTATGAATCTTCTTTTTGCATCAATCATATGTATATTAACAATTGTATTTGGTAGTGAATGGTATGTAATACTTTTAAGTGTGTAGGGGATGAGATTTTTAACTGATTTGTTGCTTCTCTATATGAGTGAAGAGGATGCATTCTGGTTGTTGGCCGAATTACTCAAAGGTGAAGTTCATGCTCCAATGGAAGGATTATATATGGTAACTCTATTCTTTTAG TTTTTGATAGGAATGTTGGATATGTTCAGGGGATGAGATTTTTAACTGATTTGTTGCTTCTCTATATGAGTGAAGAGGATGCATTCTGGTTGTTGGCCGAATTACTCAAAGGTGAAGTTCATGCTCCAATGGAAGGATTATATATGGTAACTCTATTCTTTTAG ATGAGATTTTTAACTGATTTGTTGCTTCTCTATATGAGTGAAGAGGATGCATTCTGGTTGTTGGCCGAATTACTCAAAGGTGAAGTTCATGCTCCAATGGAAGGATTATATATGGTAACTCTATTCTTTTAG MRFLTDLLLLYMSEEDAFWLLAELLKGEVHAPMEGLYMVTLFF Homology
BLAST of MELO.jh030330.1 vs. NCBI nr
Match: KAA0038217.1 (DNA repair protein recA-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 4.81e-17 Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. NCBI nr
Match: XP_016901610.1 (PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like isoform X1 [Cucumis melo] >XP_016901611.1 PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like isoform X1 [Cucumis melo] >XP_016901612.1 PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like isoform X1 [Cucumis melo] >XP_016901613.1 PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like isoform X1 [Cucumis melo] >XP_016901614.1 PREDICTED: DNA repair protein recA homolog 1, chloroplastic-like isoform X1 [Cucumis melo]) HSP 1 Score: 65.9 bits (159), Expect = 8.90e-12 Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. NCBI nr
Match: MCI12859.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein [Trifolium medium]) HSP 1 Score: 64.7 bits (156), Expect = 1.07e-11 Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. NCBI nr
Match: MBA0583217.1 (hypothetical protein [Gossypium raimondii]) HSP 1 Score: 66.6 bits (161), Expect = 1.15e-11 Identity = 33/42 (78.57%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. NCBI nr
Match: KAG0577573.1 (hypothetical protein KC19_5G165400 [Ceratodon purpureus]) HSP 1 Score: 66.2 bits (160), Expect = 1.20e-11 Identity = 33/41 (80.49%), Postives = 34/41 (82.93%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. ExPASy TrEMBL
Match: A0A5A7T9C6 (DNA repair protein recA-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold270G00550 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.33e-17 Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. ExPASy TrEMBL
Match: M0U1F1 (Rab-GAP TBC domain-containing protein OS=Musa acuminata subsp. malaccensis OX=214687 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 7.58e-13 Identity = 33/42 (78.57%), Postives = 34/42 (80.95%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. ExPASy TrEMBL
Match: A0A5K1BMN2 (Rab-GAP TBC domain-containing protein (Fragment) OS=Nymphaea colorata OX=210225 GN=NYM_LOCUS14802 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.32e-12 Identity = 31/38 (81.58%), Postives = 32/38 (84.21%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. ExPASy TrEMBL
Match: A0A1S4E059 (DNA repair protein recA homolog 1, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495083 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.31e-12 Identity = 32/38 (84.21%), Postives = 33/38 (86.84%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. ExPASy TrEMBL
Match: A0A392PMZ6 (Ypt/Rab-GAP domain of gyp1p superfamily protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 5.18e-12 Identity = 32/43 (74.42%), Postives = 35/43 (81.40%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. TAIR 10
Match: AT3G02460.1 (Ypt/Rab-GAP domain of gyp1p superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-10 Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. TAIR 10
Match: AT3G02460.2 (Ypt/Rab-GAP domain of gyp1p superfamily protein ) HSP 1 Score: 62.0 bits (149), Expect = 1.3e-10 Identity = 30/37 (81.08%), Postives = 31/37 (83.78%), Query Frame = 0
BLAST of MELO.jh030330.1 vs. TAIR 10
Match: AT5G15930.1 (plant adhesion molecule 1 ) HSP 1 Score: 59.7 bits (143), Expect = 6.7e-10 Identity = 29/41 (70.73%), Postives = 32/41 (78.05%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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