MELO.jh030170.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030170.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr01: 26548352 .. 26550926 (-)
RNA-Seq ExpressionMELO.jh030170.1
SyntenyMELO.jh030170.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACAGTCGCGCGCAACGTTCATCGTCTCTTCCTTCTGCCCGTTCGTTCGTCGTCTCTTCCGTCTGTCCGTTGCATTCGTCGTCTCTTTCGTCTGCCGCCTGCGTCGTCATCTCTTCTGTCTGCCGCCTGCGTCGTCTTCTCTTTCGTCTGCCACCTGTATCGTCGTCTCTTTCGTCTGGCTGTTTGTTCATTGTCTCTTCCATCTGGTTGTTCGTTCATCGTCTCTTCCGTCTGCCCGTTGTGTTCGTCGTCCCTCACAAGCCACTGTTCGTCGCAAGCCGCCACTCAAACAAAGTTGCGTTCATCCGTCGCCGTTCTCAAGCCATCGTCGCCGTTTCTGCCCTTTTTCAATCCGCTTATGCCTTTTTTTAGTCTAGTCCGCCGCCATCAACAGGTTATTGCTTACGATTTACCTCTCGATCGTCAACTCGGGTAAGTCCTTTCTCTCTTATTGCTGCTTTAGCTCAAGTAGCTTCTAATCTCCTGGTCTCTTCAGGAACAAAGAATTCGCTGAGAATAATTTGAAGCGCCCATTCCAATCTTGTAGGATTTCGCTTATTGAAAATGAGACATTGTTGAAGTTGTAAAGTATCTACTTCTTGTGTTACTTAGTAAACTTTTTTATCTTCCATCGAGTAAAATTAGTCTTTTGATGCTGGTGATTGGGTATGTTCCGTTTTTACAGGAGAAGGTGTAGAAGTAGGAGGGTTCATATCAGAATTGGAGTGAGGAATCTACTAAGCTAATACCATGGGTAAACACCAAATACCATGGGAACCTTTCAAATATTGTGTTTTGATATTCTGAAGAGAATATGAATATGTTTGATCATACCATTTTCCAATGATAATGATTTATCAGGAATATAAATGATTTTTCATTTGTTTAAATGTAATTAAGCCGATGTGGTGGTTCGAGGATACAATGGCTACAATACAAGATGGGCGCATAAGGTCATTGAACGAGTCTTCCTACCATCAGAAGAACGGGTGTTGCTGGCGCTGCCTCACCACTTGCTGTGACGGTATTCTTTAGATCCCTTTTAATAACTTCTCAAAATAACATCGTATAAAATTTGTTTCACTTCTATAGTCTTTTATTTTTATTCTTATGGGAATTTTTGGCTTTGTTCTTGTTGTTGTTATTTATTTACTTCCATTTATGTCGTGAAGTTCTTGTCCTTAGTCATTTCTCTTATATTCTAGATTGTTAAAAATTGGGTCAAGCAATTAACCCTTCTAAGAAGATACATAGAGATAATTGTGGAGGCTGCAAGTGCTGTAATTTTTACTTTTGGGTCTTTACCATTTTGGGGTAAGCATAATATTTGATTTAATTTTTAGAGAAAAAGATGTACTTTTGTTGTGATTTTTATTTCTTGCTGAATTTTATTAGAACAAAATAAAATTTGTTGCTAATTAAGGATGTCATTGTACCATACTCACATAGGATAAATGTCTAAAGAGGTATATTTATGCAAAGTCTTGAAATTTAATTGACAATGGATATTATTGAGGATCCTTCTATTATTGTTCAAACCTTTCTTTTGGTTATTATACATTAATTAGCTTTATGGGTTTAGAAAGTTGGATTGCAAGGCTCGTGAATTGTTCTATTATTTGAAAGGTGGAAAAGTCGATTACGGTGAAGAACACAACAACGTTTTTGGTCACTTGTAATTCGGCCTCCTGTATGGAAAAGGTCAATTGTTTCTTTTGATTTCTCTGACTGAATAAGTTGAACATACTTCCATACGTTGATTTACGGTTAACACAAAGAAGAAAAAAATAATAGTTTTCTAAGGAAAAGTCTTTAGATCAAAGTAGAGAGGAATATGAGAATGTGAATGGATCACATACTTAGTAGGAAGTAAAGCATTGGTTCAAGTGAATGGATCACATACTTAGTAGGAGCATTATGTTGTAAGTGTGTTAGGAATTTGACTATATGTGAGTCTTTGTTAAGTATGTCTAACATAAAAGCATTGTATTGGAATTGCTGAACTATTTCAATTAGCGAAGTTTTCTTTCCATAAGCAAATTGTCCCCTGGACAACATGAATTTGCACTAAACTGAGTTAATAACTCTTGTATCTCATATTATTAATATCATTATTTATTCTATCTTTAGTTTTTGTTATATTACTACATGTTTTAAGGTGATTTTCAACATTTTCAACTTTTACGTGTTGTCATATCGCAACATGTGGATATCACTTTCTATCTCAATGATGAAAATAAACCATTCTTATAAAATAAATGTTTCTTCTGCAGCTTGCCAAGTCAAAATTTGGGAGTTATGATGTGGAAGTATCTTCTTTGAGGCATGAAATAAAAGAGTTAAAGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGTAAGGATATTGCAACAAGAAAAGGTTCATATTGTAGCTTAGACATGTATATCGTACATTGATATATATATACAATTTCTTTGATGGAAAGTTTGAGTTGATTTCAATTTTTCAATTGATGTTGTATTTTAATATTATTGGACTTCAAAATAGGTGAATTATAAAATATATGGATATTTTAAA

mRNA sequence

CAACAGTCGCGCGCAACGTTCATCGTCTCTTCCTTCTGCCCGTTCGTTCGTCGTCTCTTCCGTCTGTCCGTTGCATTCGTCGTCTCTTTCGTCTGCCGCCTGCGTCGTCATCTCTTCTGTCTGCCGCCTGCGTCGTCTTCTCTTTCGTCTGCCACCTGTATCGTCGTCTCTTTCGTCTGGCTGTTTGTTCATTGTCTCTTCCATCTGGTTGTTCGTTCATCGTCTCTTCCGTCTGCCCGTTGTGTTCGTCGTCCCTCACAAGCCACTGTTCGTCGCAAGCCGCCACTCAAACAAAGTTGCGTTCATCCGTCGCCGTTCTCAAGCCATCGTCGCCGTTTCTGCCCTTTTTCAATCCGCTTATGCCTTTTTTTAGTCTAGTCCGCCGCCATCAACAGGTTATTGCTTACGATTTACCTCTCGATCGTCAACTCGGGAACAAAGAATTCGCTGAGAATAATTTGAAGCGCCCATTCCAATCTTGAGAAGGTGTAGAAGTAGGAGGGTTCATATCAGAATTGGAGTGAGGAATCTACTAAGCTAATACCATGGCCGATGTGGTGGTTCGAGGATACAATGGCTACAATACAAGATGGGCGCATAAGGTCATTGAACGAGTCTTCCTACCATCAGAAGAACGGGTGTTGCTGGCGCTGCCTCACCACTTGCTGTGACGCTTGCCAAGTCAAAATTTGGGAGTTATGATGTGGAAGTATCTTCTTTGAGGCATGAAATAAAAGAGTTAAAGAGAGGTTGGAAACCGCAAATGCAAGGGCTCAATCGTTTGAGAAGAAGTAAGGATATTGCAACAAGAAAAGGTTCATATTGTAGCTTAGACATGTATATCGTACATTGATATATATATACAATTTCTTTGATGGAAAGTTTGAGTTGATTTCAATTTTTCAATTGATGTTGTATTTTAATATTATTGGACTTCAAAATAGGTGAATTATAAAATATATGGATATTTTAAA

Coding sequence (CDS)

ATGTGGTGGTTCGAGGATACAATGGCTACAATACAAGATGGGCGCATAAGGTCATTGAACGAGTCTTCCTACCATCAGAAGAACGGGTGTTGCTGGCGCTGCCTCACCACTTGCTGTGACGCTTGCCAAGTCAAAATTTGGGAGTTATGA

Protein sequence

MWWFEDTMATIQDGRIRSLNESSYHQKNGCCWRCLTTCCDACQVKIWEL
Homology
[Close]
BLAST of MELO.jh030170.1 vs. NCBI nr
Match: KAA0065691.1 (hypothetical protein E6C27_scaffold90G001590 [Cucumis melo var. makuwa])

HSP 1 Score: 73.6 bits (179), Expect = 1.59e-15
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MWWFEDTMATIQDGRIRSLNESSYHQKNGCCWR-C-LTTCCDA 41
          MWW ED +ATI+DGR+RSLNESS+HQKNGCC R C LTTCCDA
Sbjct: 1  MWWLEDIVATIRDGRLRSLNESSHHQKNGCCQRRCRLTTCCDA 43

[Close]
BLAST of MELO.jh030170.1 vs. ExPASy TrEMBL
Match: A0A5A7VIY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90G001590 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 7.69e-16
Identity = 34/43 (79.07%), Postives = 38/43 (88.37%), Query Frame = 0 

Query: 1  MWWFEDTMATIQDGRIRSLNESSYHQKNGCCWR-C-LTTCCDA 41
          MWW ED +ATI+DGR+RSLNESS+HQKNGCC R C LTTCCDA
Sbjct: 1  MWWLEDIVATIRDGRLRSLNESSHHQKNGCCQRRCRLTTCCDA 43

The following BLAST results are available for this feature:
BLAST of MELO.jh030170.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0065691.11.59e-1579.07hypothetical protein E6C27_scaffold90G001590 [Cucumis melo var. makuwa][more]
BLAST of MELO.jh030170.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh030170.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7VIY47.69e-1679.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
BLAST of MELO.jh030170.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh030170.1.t1MELO.jh030170.1.t1mRNA