MELO.jh030165.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030165.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Descriptionmacrophage erythroblast attacher
Locationchr01: 25648860 .. 25649112 (-)
RNA-Seq ExpressionMELO.jh030165.1
SyntenyMELO.jh030165.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGACACCAAGAACCCACCTCAAGTCCTTCCAAATGGTTATGTGTATAGTGCCAAGGTTAGCATCTTTTCATTTGTATGAACTGATTAGAAGATTTATAACAAAGTTCATTTCAAAATGTTGAGTTTGTGTTTGACATTGACGCTTGGCAGGCTCTAGAAAGAATGTCCAAGGAAACAGTGGTAAAATCACTTGCCCAAGAACAGGCTTTGTGTGCAACTATTCAGAGCTGGTGAAGGCATACATATCATAG

mRNA sequence

ATGGACACCAAGAACCCACCTCAAGTCCTTCCAAATGGTTATGTGTATAGTGCCAAGAAAGAATGTCCAAGGAAACAGTGGTAAAATCACTTGCCCAAGAACAGGCTTTGTGTGCAACTATTCAGAGCTGGTGAAGGCATACATATCATAG

Coding sequence (CDS)

ATGGTTATGTGTATAGTGCCAAGAAAGAATGTCCAAGGAAACAGTGGTAAAATCACTTGCCCAAGAACAGGCTTTGTGTGCAACTATTCAGAGCTGGTGAAGGCATACATATCATAG

Protein sequence

MVMCIVPRKNVQGNSGKITCPRTGFVCNYSELVKAYIS
Homology
BLAST of MELO.jh030165.1 vs. NCBI nr
Match: XP_038893185.1 (protein MAEA homolog [Benincasa hispida])

HSP 1 Score: 57.0 bits (136), Expect = 6.43e-08
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = 0

Query: 14  NSGKITCPRTGFVCNYSELVKAYIS 38
           NSGKITCPRTGFVCNYSELVKAYIS
Sbjct: 389 NSGKITCPRTGFVCNYSELVKAYIS 413

BLAST of MELO.jh030165.1 vs. NCBI nr
Match: EXB88501.1 (hypothetical protein L484_017254 [Morus notabilis])

HSP 1 Score: 53.1 bits (126), Expect = 1.01e-07
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0

Query: 14 NSGKITCPRTGFVCNYSELVKAYIS 38
          N+GKITCPRTGFVCNY +LVKAYIS
Sbjct: 55 NNGKITCPRTGFVCNYKDLVKAYIS 79

BLAST of MELO.jh030165.1 vs. NCBI nr
Match: XP_022139154.1 (macrophage erythroblast attacher [Momordica charantia])

HSP 1 Score: 56.2 bits (134), Expect = 1.20e-07
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 38
           K  + NSGKITCPRTGF CNYSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFACNYSELVKAYIS 413

BLAST of MELO.jh030165.1 vs. NCBI nr
Match: MBA0696950.1 (hypothetical protein [Gossypium aridum] >MBA0725682.1 hypothetical protein [Gossypium laxum] >MBA0871432.1 hypothetical protein [Gossypium schwendimanii])

HSP 1 Score: 52.8 bits (125), Expect = 1.25e-07
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 8  RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 38
          ++  + N+GKITCPRTG VCNYS+LVKAYIS
Sbjct: 43 KEMAEKNNGKITCPRTGLVCNYSDLVKAYIS 73

BLAST of MELO.jh030165.1 vs. NCBI nr
Match: KAG7031836.1 (Macrophage erythroblast attacher, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 55.8 bits (133), Expect = 1.64e-07
Identity = 25/30 (83.33%), Postives = 27/30 (90.00%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 38
           K  + NSGKITCPRTGFVC+YSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFVCSYSELVKAYIS 413

BLAST of MELO.jh030165.1 vs. ExPASy Swiss-Prot
Match: Q9M2V9 (Protein MAEA homolog OS=Arabidopsis thaliana OX=3702 GN=MAEA PE=1 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-07
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 8   RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           ++  + N GKITCPRTG VCNY+ELVKAYIS
Sbjct: 388 KEMAEKNGGKITCPRTGLVCNYTELVKAYIS 418

BLAST of MELO.jh030165.1 vs. ExPASy TrEMBL
Match: W9RFK4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017254 PE=4 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 4.91e-08
Identity = 22/25 (88.00%), Postives = 24/25 (96.00%), Query Frame = 0

Query: 14 NSGKITCPRTGFVCNYSELVKAYIS 38
          N+GKITCPRTGFVCNY +LVKAYIS
Sbjct: 55 NNGKITCPRTGFVCNYKDLVKAYIS 79

BLAST of MELO.jh030165.1 vs. ExPASy TrEMBL
Match: A0A6J1CC47 (macrophage erythroblast attacher OS=Momordica charantia OX=3673 GN=LOC111010128 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 5.82e-08
Identity = 25/30 (83.33%), Postives = 26/30 (86.67%), Query Frame = 0

Query: 9   KNVQGNSGKITCPRTGFVCNYSELVKAYIS 38
           K  + NSGKITCPRTGF CNYSELVKAYIS
Sbjct: 384 KMAKENSGKITCPRTGFACNYSELVKAYIS 413

BLAST of MELO.jh030165.1 vs. ExPASy TrEMBL
Match: A0A7J9MK10 (RING-Gid-type domain-containing protein OS=Gossypium schwendimanii OX=34291 GN=Goshw_025609 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.05e-08
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 8  RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 38
          ++  + N+GKITCPRTG VCNYS+LVKAYIS
Sbjct: 43 KEMAEKNNGKITCPRTGLVCNYSDLVKAYIS 73

BLAST of MELO.jh030165.1 vs. ExPASy TrEMBL
Match: A0A7J8YCF6 (RING-Gid-type domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_003467 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.05e-08
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 8  RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 38
          ++  + N+GKITCPRTG VCNYS+LVKAYIS
Sbjct: 43 KEMAEKNNGKITCPRTGLVCNYSDLVKAYIS 73

BLAST of MELO.jh030165.1 vs. ExPASy TrEMBL
Match: A0A7J9AP39 (RING-Gid-type domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_022246 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.05e-08
Identity = 22/31 (70.97%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 8  RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 38
          ++  + N+GKITCPRTG VCNYS+LVKAYIS
Sbjct: 43 KEMAEKNNGKITCPRTGLVCNYSDLVKAYIS 73

BLAST of MELO.jh030165.1 vs. TAIR 10
Match: AT3G55070.1 (LisH/CRA/RING-U-box domains-containing protein )

HSP 1 Score: 53.5 bits (127), Expect = 4.2e-08
Identity = 22/31 (70.97%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 8   RKNVQGNSGKITCPRTGFVCNYSELVKAYIS 39
           ++  + N GKITCPRTG VCNY+ELVKAYIS
Sbjct: 388 KEMAEKNGGKITCPRTGLVCNYTELVKAYIS 418

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038893185.16.43e-08100.00protein MAEA homolog [Benincasa hispida][more]
EXB88501.11.01e-0788.00hypothetical protein L484_017254 [Morus notabilis][more]
XP_022139154.11.20e-0783.33macrophage erythroblast attacher [Momordica charantia][more]
MBA0696950.11.25e-0770.97hypothetical protein [Gossypium aridum] >MBA0725682.1 hypothetical protein [Goss... [more]
KAG7031836.11.64e-0783.33Macrophage erythroblast attacher, partial [Cucurbita argyrosperma subsp. argyros... [more]
Match NameE-valueIdentityDescription
Q9M2V96.0e-0770.97Protein MAEA homolog OS=Arabidopsis thaliana OX=3702 GN=MAEA PE=1 SV=1[more]
Match NameE-valueIdentityDescription
W9RFK44.91e-0888.00Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_017254 PE=4 SV=1[more]
A0A6J1CC475.82e-0883.33macrophage erythroblast attacher OS=Momordica charantia OX=3673 GN=LOC111010128 ... [more]
A0A7J9MK106.05e-0870.97RING-Gid-type domain-containing protein OS=Gossypium schwendimanii OX=34291 GN=G... [more]
A0A7J8YCF66.05e-0870.97RING-Gid-type domain-containing protein OS=Gossypium aridum OX=34290 GN=Goari_00... [more]
A0A7J9AP396.05e-0870.97RING-Gid-type domain-containing protein OS=Gossypium laxum OX=34288 GN=Golax_022... [more]
Match NameE-valueIdentityDescription
AT3G55070.14.2e-0870.97LisH/CRA/RING-U-box domains-containing protein [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh030165.1.t1MELO.jh030165.1.t1mRNA