MELO.jh030142.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh030142.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr01: 22964905 .. 22966943 (+)
RNA-Seq ExpressionMELO.jh030142.1
SyntenyMELO.jh030142.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGCCTATCCTCTCTTCCTCTCATATCCTCTTCGCCCTGTGTTCTGAGCTTACAAAAGCCCTTTGTTTTTATTCCCTGTACTTACGAGTGCACGTTCGTACTGGGAAGCTGTGTTAACCTTGGGGAGCAAACGACATAACGATTAGCACCTCGGTCAGCCGAAATTGCTTTCAGGGCAGTGGTTCGTCACGACACAACAATAAATCTGATCGACCTTACCTTCTAACAAAGGATAGACCCAAGTGTGAATACCACGAGCTCTCCTGTCCACAAAAAAAGTTTGCTCTCATTCTTTTTCATCTCTACTTCTTCTTCTTAACATCATCCTCTTTTTCTTAGAAATTTTCATAAAAGTTTTGCACCCTTTTAACATTTATAATTTTTTAGTTTGTGCAAGATGTTTTATTTTTCAATCAAATTTTTAAATTGCTACGAGTGAATCAATTTGAGACATTTATTAAGATTATATTTAAAGATAGTTAATGCAATCAAATTTTAAGAAGTAATTTAGAATTAATGAACATATAACTTAATATGCACAATACTTCTACTATAACCTCAAAGTTAAAAGTTCGATTTTTCGATTTTATAATAAAAGAACTATTAAAATAGACAATTCTCAATTCCCAAAAGAAATTTTATCATTATCATGTTACAATCATCCATCTTGGTCCTAATCCATTCAAATTTATTGTCAAGTTTACTTGGAAGGAAAGTAAAGTATCTGTAAGTTTTTTCAATGAAGATATATCCTTCGATACGTTTTTTCTTGGAGCATTGTCAATGATGTCAAAGCAACCAAAATATTTATCATTCAAAATTAATGATATTTTGCCATGAAGTGCAGTGGATTTTTGTTATTTCATGATTTTTTTCTGTCCTCAAGCATAGATAGTTTATTTTTTTATTATTAAAAATTTTATGATTTTTTAGCTAAAAAATATTTACAAAATATAATAAAATTTTAGATTCTATAAACTCTTATTAATGTCTACGAATTATCATTATCTATGATTATATTATATTTATAAATATATTTAGTAATTTTGTCATTTACAATAATCTCTCGTATAATTGTTACAAATGAAGTTTTAAATTTATTTTTAAAAATTTATATTTTAAAAATCAAACCACACCCACATGTTCTTCAACTTTCAATTAAAAAATCAAACATCCGAGCTCTTCAAACGAAAATTGTCCAAAATATTTATACTTGATAAAAAATGCAATAAGTTTTTGTCATAAATAGTTTTCTAAAAAAATAATAGTTTTGATAAATTAAACTTAAAAAAAAAATTAAAAGAGAGAGAAAAGAAAGGATTAATAGAGAAATATCTCTAACAAGAGAATCTCGAACCATTTCCCCAGGAATTCTCAAAGAACAGTAACATAAATTTCTTCAGCAACTCAATTTGAAATCAAAAGACAGACAGATCCATAATGCTTCGAAATTTACAAACCTCCACCATATCTTCTCCTCCTCCTCCTCCAAAATTCTCGAGAAATTGCTTCCCAATTTCATACTACACCAACAGCCAATGGCTTTTTCACCCTTCAAATCCCCAGTTCTTCTTCATTGCGCTTCCCATTCTCCTTCTTCGGCAAAGCTAAGAGATAATTACCATGCGCCGCTGCGGCAAGAACTCACGGATCGTTTTTGCCCTAATGACAGGGCTTCTGCTTCTGCTTCTGCTTGCGATCGCGATGGCGAGGCCGATTAATAGACCGCCAATTCCGCCGTCTGGCCGGAACCCCTGCTCTCATTTTTCGCTGCCCGGTGATGGAAGGCATTGCCTTTGATGGATGAAGGGATCGGAGCTCAGGGGAGATTGTGTGCATGTTCTTAATTTCTTGAGGTTCTTTGTTTTTTTACCAACGACCTCTTTTGGCGTAGCCATTAGCAAAACTATAAAATATAACTTTTGCTTACGTCAAATTTCGTTGTAAAATACTAAAATTATTGTTCATCTTCATCATGCTATGAATGATGTTTCATATTTGTAACGGATCAGCAATAATAAACTCGAAAAAAGCTCTT

mRNA sequence

ATCGCCTATCCTCTCTTCCTCTCATATCCTCTTCGCCCTGTGTTCTGAGCTTACAAAAGCCCTTTGTTTTTATTCCCTGTACTTACGAGTGCACGTTCGTACTGGGAAGCTGTGTTAACCTTGGGGAGCAAACGACATAACGATTAGCACCTCGGTCAGCCGAAATTGCTTTCAGGGCAGTGGTTCGTCACGACACAACAATAAATCTGATCGACCTTACCTTCTAACAAAGGATAGACCCAAGTGTGAATACCACGAGCTCTCCTGTCCACAAAAAAAGAATTCTCAAAGAACAGTAACATAAATTTCTTCAGCAACTCAATTTGAAATCAAAAGACAGACAGATCCATAATGCTTCGAAATTTACAAACCTCCACCATATCTTCTCCTCCTCCTCCTCCAAAATTCTCGAGAAATTGCTTCCCAATTTCATACTACACCAACAGCCAATGGCTTTTTCACCCTTCAAATCCCCAGTTCTTCTTCATTGCGCTTCCCATTCTCCTTCTTCGGCAAAGCTAAGAGATAATTACCATGCGCCGCTGCGGCAAGAACTCACGGATCGTTTTTGCCCTAATGACAGGGCTTCTGCTTCTGCTTCTGCTTGCGATCGCGATGGCGAGGCCGATTAATAGACCGCCAATTCCGCCGTCTGGCCGGAACCCCTGCTCTCATTTTTCGCTGCCCGGTGATGGAAGGCATTGCCTTTGATGGATGAAGGGATCGGAGCTCAGGGGAGATTGTGTGCATGTTCTTAATTTCTTGAGGTTCTTTGTTTTTTTACCAACGACCTCTTTTGGCGTAGCCATTAGCAAAACTATAAAATATAACTTTTGCTTACGTCAAATTTCGTTGTAAAATACTAAAATTATTGTTCATCTTCATCATGCTATGAATGATGTTTCATATTTGTAACGGATCAGCAATAATAAACTCGAAAAAAGCTCTT

Coding sequence (CDS)

ATGGCTTTTTCACCCTTCAAATCCCCAGTTCTTCTTCATTGCGCTTCCCATTCTCCTTCTTCGGCAAAGCTAAGAGATAATTACCATGCGCCGCTGCGGCAAGAACTCACGGATCGTTTTTGCCCTAATGACAGGGCTTCTGCTTCTGCTTCTGCTTGCGATCGCGATGGCGAGGCCGATTAA

Protein sequence

MAFSPFKSPVLLHCASHSPSSAKLRDNYHAPLRQELTDRFCPNDRASASASACDRDGEAD
Homology
[Close]
BLAST of MELO.jh030142.1 vs. NCBI nr
Match: KGN44698.1 (hypothetical protein Csa_015514 [Cucumis sativus])

HSP 1 Score: 83.6 bits (205), Expect = 4.50e-19
Identity = 49/66 (74.24%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 1   MAFSPFKS----PVLLHCASHSPSSAKLRDNY-HAPLRQELTDRFCPNDRASASASACD- 60
           MAFSPFKS    P+LLH ASHSPSS KLRDN  HAP RQELTD FCPN RASASA   D 
Sbjct: 36  MAFSPFKSIPNSPILLHYASHSPSSPKLRDNTTHAPRRQELTDPFCPNGRASASAFDRDG 95

[Close]
BLAST of MELO.jh030142.1 vs. ExPASy TrEMBL
Match: A0A0A0K5D0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372920 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 2.18e-19
Identity = 49/66 (74.24%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 1   MAFSPFKS----PVLLHCASHSPSSAKLRDNY-HAPLRQELTDRFCPNDRASASASACD- 60
           MAFSPFKS    P+LLH ASHSPSS KLRDN  HAP RQELTD FCPN RASASA   D 
Sbjct: 36  MAFSPFKSIPNSPILLHYASHSPSSPKLRDNTTHAPRRQELTDPFCPNGRASASAFDRDG 95

The following BLAST results are available for this feature:
BLAST of MELO.jh030142.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN44698.14.50e-1974.24hypothetical protein Csa_015514 [Cucumis sativus][more]
BLAST of MELO.jh030142.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh030142.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K5D02.18e-1974.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G372920 PE=4 SV=1[more]
BLAST of MELO.jh030142.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 41..60

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh030142.1.t1MELO.jh030142.1.t1mRNA