MELO.jh028140.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh028140.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 15172536 .. 15173289 (+)
RNA-Seq ExpressionMELO.jh028140.1
SyntenyMELO.jh028140.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTGTGTCGCTGTGAACTCGTCGGCGTCGCTCCATCTTCCAAATGTCGTCCGTCGAACGTCGCTCCGTTGCCGAGCATTGTTCTTCTTCAGCTTGGTCAAGGTTGCTCCGTCGCCGTCGTTTCGAGCCGTCGTGTAGTATCCTTTTATGCAAAATCTAGGGTTCGGTATTTAAAGTATTTCATCAATTTTTCTCAATTTCGTTTTCCCCCCAAATCGATCGTTATTCCTGATGATCTATCACATCTTCTGTTGGTTTCTTCTTTTCTGGCTACCGGTCTTTTTTTATTTGAGGCTATGATATTGAGGAACTAAAGGAGGAAGGAGAGTTGAAGAGTGGGGAAGAGGGAAATTCGGGTGTTATTGTTAGTAATTTGGAGAAGAGCATTGTTAGGTCTGATGTGAAAAGAATCGTTGTTGGAGTTGGGGCTCGTGTACTTTTCTAGAAATTTGTCTCTTATCTCTTTCACAAAAATTTTTCACATAGAAGATGTTGAAGCTGATATTATTTTTTTTCACTCACGAAGTGCTGCTGCTTGATTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCCTGATTTCTTTGCAGATCACAAAGTTTGGAGTTGAAGAGTCTGGCCACCGATGGCAGAGTCATCTGTAGATGGGTTTTTCTATTGATACTATTGCGGCTCACTGTAACACAAATTCCCTTTTCCTGGTCTAAATTGCTCGGCACACCAACTGGCAAGGAGCATCAGATAATTTCTTGA

mRNA sequence

AGTGTGTCGCTGTGAACTCGTCGGCGTCGCTCCATCTTCCAAATGTCGTCCGTCGAACGTCGCTCCGTTGCCGAGCATTGTTCTTCTTCAGCTTGGTCAAGGTTGCTCCGTCGCCGTCGTTTCGAGCCGTCGTGTAGTATCCTTTTATGCAAAATCTAGGGTTCGGTATTTAAAGTATTTCATCAATTTTTCTCAATTTCGTTTTCCCCCCAAATCGATCGTTATTCCTGATGATCTATCACATCTTCTGTTGGTTTCTTCTTTTCTGGCTACCGGTCTTTTTTTATTTGAGGCTATGATATTGAGGAACTAAAGGAGGAAGGAGAGTTGAAGAGTGGGGAAGAGGGAAATTCGGGTGTTATTGTTAGTAATTTGGAGAAGAGCATTGTTAGGTCTGATGTGAAAAGAATCGTTGTTGGAGTTGGGGCTCGTTGCTGCTGCTTGATTCCACACCATTGTGCACACACAAAGCTCATGTTTTTCCTGATTTCTTTGCAGATCACAAAGTTTGGAGTTGAAGAGTCTGGCCACCGATGGCAGAGTCATCTGTAGATGGGTTTTTCTATTGATACTATTGCGGCTCACTGTAACACAAATTCCCTTTTCCTGGTCTAAATTGCTCGGCACACCAACTGGCAAGGAGCATCAGATAATTTCTTGA

Coding sequence (CDS)

ATGTCGTCCGTCGAACGTCGCTCCGTTGCCGAGCATTGTTCTTCTTCAGCTTGGTCAAGGTTGCTCCGTCGCCGTCGTTTCGAGCCGTCGTGTAGTATCCTTTTATGCAAAATCTAG

Protein sequence

MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCSILLCKI
Homology
[Close]
BLAST of MELO.jh028140.1 vs. NCBI nr
Match: KAA0053949.1 (putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa] >TYJ98003.1 putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa] >TYK04262.1 putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa])

HSP 1 Score: 67.4 bits (163), Expect = 3.55e-13
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32
          MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS
Sbjct: 1  MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32

[Close]
BLAST of MELO.jh028140.1 vs. NCBI nr
Match: KAA0043454.1 (putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa])

HSP 1 Score: 65.1 bits (157), Expect = 1.19e-11
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0 

Query: 1  MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32
          MS VERRSVAEHCSSSAWSRLLRRRRFEPSCS
Sbjct: 1  MSFVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32

[Close]
BLAST of MELO.jh028140.1 vs. ExPASy TrEMBL
Match: A0A5D3BFG5 (Putative dual specificity protein phosphatase DSP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4559G00090 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.72e-13
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = 0 

Query: 1  MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32
          MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS
Sbjct: 1  MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32

[Close]
BLAST of MELO.jh028140.1 vs. ExPASy TrEMBL
Match: A0A5A7TJG2 (Putative dual specificity protein phosphatase DSP8 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1639G00720 PE=4 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 5.78e-12
Identity = 31/32 (96.88%), Postives = 31/32 (96.88%), Query Frame = 0 

Query: 1  MSSVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32
          MS VERRSVAEHCSSSAWSRLLRRRRFEPSCS
Sbjct: 1  MSFVERRSVAEHCSSSAWSRLLRRRRFEPSCS 32

The following BLAST results are available for this feature:
BLAST of MELO.jh028140.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0053949.13.55e-13100.00putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa] >T... [more]
KAA0043454.11.19e-1196.88putative dual specificity protein phosphatase DSP8 [Cucumis melo var. makuwa][more]
BLAST of MELO.jh028140.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh028140.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BFG51.72e-13100.00Putative dual specificity protein phosphatase DSP8 OS=Cucumis melo var. makuwa O... [more]
A0A5A7TJG25.78e-1296.88Putative dual specificity protein phosphatase DSP8 OS=Cucumis melo var. makuwa O... [more]
BLAST of MELO.jh028140.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh028140.1.t1MELO.jh028140.1.t1mRNA