MELO.jh027033.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh027033.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr12: 21682822 .. 21683574 (+)
RNA-Seq ExpressionMELO.jh027033.1
SyntenyMELO.jh027033.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CATCACATTTGATGGGATCTATCATCGTCTTCAATTCCATTCCATTCATGATTTGCACTGCTCCTTACTTTCTCAATGAAATTCTTAGCTTCTTCAATCAGCAACCAAGTTTCCGGCAGTTCAGAGATGACATAAAATCCATGAATCGCCTTCGGATATTCCACCAACTCCACTTCTTTTCCGGCCTTCTTCAACCACTCGTAATACTTCCTATCCCAATCTCGCAACTGATCTGATCCTCCCACGATCACAAGCGTCGCCGGAAATTTCACCGCCGAAATGTTTACGCCGTCCTCTCCAAACACGTGCGCCGCCCCATGGTTTCGGTTCGCTCCATCAGGCAAAAACGCTTTCCAGTACCAATCCGCCCGCTCCAAATTCAAAGTCGGCGATCGTCCGAATCGGATTTCTGATTCTGTCCGCTCCTCTCCACCGAAGAACGGTTGAATCGCAATTAAACCTCTGATCTTCACCTTCTTGAAGTTATAATCGCTAGATCTGACAACGACATGGTGCGCTATGTTTCCGCCAGCACTATCTCCAGCGATAAAACAGCGGCCGAAATCAGATTTCTTCGGAAACGCACTAGAATCCAAATCGTCGATGAACTTCAAAGCGTCGAATCCGTCTTCGTACTGAGAAGGATATCGGTGCTCGGGAGAGAGGCGGTAATTGACAGATACAACGATGGCTTGGAGTTCGCGAGCGAGTTTGCGACAGAGAGTATCGAAGGAGAGGAAATCAGGGGAAAAG

mRNA sequence

CATCACATTTGATGGGATCTATCATCGTCTTCAATTCCATTCCATTCATGATTTGCACTGCTCCTTACTTTCTCAATGAAATTCTTAGCTTCTTCAATCAGCAACCAAGTTTCCGGCAGTTCAGAGATGACATAAAATCCATGAATCGCCTTCGGATATTCCACCAACTCCACTTCTTTTCCGGCCTTCTTCAACCACTCGTAATACTTCCTATCCCAATCTCGCAACTGATCTGATCCTCCCACGATCACAAGCGTCGCCGGAAATTTCACCGCCGAAATGTTTACGCCGTCCTCTCCAAACACGTGCGCCGCCCCATGGTTTCGGTTCGCTCCATCAGGCAAAAACGCTTTCCAGTACCAATCCGCCCGCTCCAAATTCAAAGTCGGCGATCGTCCGAATCGGATTTCTGATTCTGTCCGCTCCTCTCCACCGAAGAACGGTTGAATCGCAATTAAACCTCTGATCTTCACCTTCTTGAAGTTATAATCGCTAGATCTGACAACGACATGGTGCGCTATGTTTCCGCCAGCACTATCTCCAGCGATAAAACAGCGGCCGAAATCAGATTTCTTCGGAAACGCACTAGAATCCAAATCGTCGATGAACTTCAAAGCGTCGAATCCGTCTTCGTACTGAGAAGGATATCGGTGCTCGGGAGAGAGGCGGTAATTGACAGATACAACGATGGCTTGGAGTTCGCGAGCGAGTTTGCGACAGAGAGTATCGAAGGAGAGGAAATCAGGGGAAAAG

Coding sequence (CDS)

ATGGTGCGCTATGTTTCCGCCAGCACTATCTCCAGCGATAAAACAGCGGCCGAAATCAGATTTCTTCGGAAACGCACTAGAATCCAAATCGTCGATGAACTTCAAAGCGTCGAATCCGTCTTCGTACTGAGAAGGATATCGGTGCTCGGGAGAGAGGCGGTAATTGACAGATACAACGATGGCTTGGAGTTCGCGAGCGAGTTTGCGACAGAGAGTATCGAAGGAGAGGAAATCAGGGGAAAA

Protein sequence

MVRYVSASTISSDKTAAEIRFLRKRTRIQIVDELQSVESVFVLRRISVLGREAVIDRYNDGLEFASEFATESIEGEEIRGK
Homology
[Close]
BLAST of MELO.jh027033.1 vs. ExPASy TrEMBL
Match: A0A3B6C1Q7 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 6.45e-04
Identity = 30/84 (35.71%), Postives = 48/84 (57.14%), Query Frame = 0 

Query: 1   MVRYVSASTISSDKTAAEIR---FLRKRTRIQIVDELQSVESVFVLRRISVLGREAVIDR 60
           +V YV+A  +  ++ A E+     ++ R  +  VDE + V  V V  R+ VLGREAV+D 
Sbjct: 202 VVDYVAAGALPGEEAAGEVHADALVQPRDAVG-VDEAERVHGVVVGGRVGVLGREAVLDG 261

Query: 61  YNDGLEFASEFATESIEGEEIRGK 81
            +DG +  +E A E++E    RG+
Sbjct: 262 DHDGADAPAEAAAEAVEVALARGE 284

The following BLAST results are available for this feature:
BLAST of MELO.jh027033.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh027033.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh027033.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A3B6C1Q76.45e-0435.71Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
BLAST of MELO.jh027033.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh027033.1.t1MELO.jh027033.1.t1mRNA