MELO.jh026620.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh026620.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 24765307 .. 24765578 (+)
RNA-Seq ExpressionMELO.jh026620.1
SyntenyMELO.jh026620.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGAGAAAAATGAGTCCGGGGCATTCTTGCTCGCATTTTCTTGGGATGAAAACCGGATGTTCTCGAGCTCGACCCGTTTCGTTCGCAGCAAGTGCATTTCGAGTGGGTTTTGGCACCGGACGAGCGTTTGCGACTCGTTGGAAGCATTGGCCATCGTTTGGACCGTTTTGGGTCGCACCACATTTCTCCCTCCAACGAGCTCGCATCCCGACCTATACCTCTGGAAAATGTGTCTGGGAGCATGCCAGAAGTGTGGGTTGAAGTTCTTGGA

mRNA sequence

GATGAGAAAAATGAGTCCGGGGCATTCTTGCTCGCATTTTCTTGGGATGAAAACCGGATGTTCTCGAGCTCGACCCGTTTCGTTCGCAGCAAGTGCATTTCGAGTGGGTTTTGGCACCGGACGAGCGTTTGCGACTCGTTGGAAGCATTGGCCATCGTTTGGACCGTTTTGGGTCGCACCACATTTCTCCCTCCAACGAGCTCGCATCCCGACCTATACCTCTGGAAAATGTGTCTGGGAGCATGCCAGAAGTGTGGGTTGAAGTTCTTGGA

Coding sequence (CDS)

ATGAGAAAAATGAGTCCGGGGCATTCTTGCTCGCATTTTCTTGGGATGAAAACCGGATGTTCTCGAGCTCGACCCGTTTCGTTCGCAGCAAGTGCATTTCGAGTGGGTTTTGGCACCGGACGAGCGTTTGCGACTCGTTGGAAGCATTGGCCATCGTTTGGACCGTTTTGGGTCGCACCACATTTCTCCCTCCAACGAGCTCGCATCCCGACCTATACCTCTGGAAAATGTGTCTGGGAGCATGCCAGAAGTGTGGGTTGA

Protein sequence

MRKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGFGTGRAFATRWKHWPSFGPFWVAPHFSLQRARIPTYTSGKCVWEHARSVG
Homology
BLAST of MELO.jh026620.1 vs. NCBI nr
Match: KAA0065855.1 (hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (326), Expect = 2.77e-36
Identity = 66/85 (77.65%), Postives = 69/85 (81.18%), Query Frame = 0

Query: 2   RKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGFGTGRAFATRWKHWPSFGPFWVAPH 61
           RK+SPGHS S FLG  TG  RA+PVSFAASAF V   TGRAFATRWK  PSFGPFWVAP 
Sbjct: 16  RKLSPGHSRSRFLGTSTGSPRAQPVSFAASAFPVVSDTGRAFATRWKLRPSFGPFWVAPQ 75

Query: 62  FSLQRARIPTYTSGKCVWEHARSVG 86
           FSL+RAR PTYTSGK V EHARSVG
Sbjct: 76  FSLKRARFPTYTSGKRVREHARSVG 100

BLAST of MELO.jh026620.1 vs. NCBI nr
Match: KAA0062674.1 (uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (312), Expect = 2.26e-31
Identity = 61/81 (75.31%), Postives = 63/81 (77.78%), Query Frame = 0

Query: 2   RKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGFGTGRAFATRWKHWPSFGPFWVAPH 61
           RK+SP HS SHFLG  T   RA PVSFAASAF V   TGRAF +RWKHWPSFGPFWVAP 
Sbjct: 29  RKLSPRHSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFTSRWKHWPSFGPFWVAPQ 88

Query: 62  FSLQRARIPTYTSGKCVWEHA 82
           FSLQRAR PTYT GK V EHA
Sbjct: 89  FSLQRARFPTYTFGKHVREHA 109

BLAST of MELO.jh026620.1 vs. NCBI nr
Match: TYK01208.1 (uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 123 bits (308), Expect = 4.97e-31
Identity = 61/81 (75.31%), Postives = 63/81 (77.78%), Query Frame = 0

Query: 2   RKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGFGTGRAFATRWKHWPSFGPFWVAPH 61
           RK+SP HS SHFLG  T   RA PVSFAASAF V   TGRAFA+RWKHWPSFGPFWVAP 
Sbjct: 29  RKLSPRHSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFASRWKHWPSFGPFWVAPQ 88

Query: 62  FSLQRARIPTYTSGKCVWEHA 82
           FSLQRAR PTYT  K V EHA
Sbjct: 89  FSLQRARFPTYTFEKHVREHA 109

BLAST of MELO.jh026620.1 vs. NCBI nr
Match: KAA0046850.1 (hypothetical protein E6C27_scaffold19358G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 6.97e-05
Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 0

Query: 1   MRKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGF 37
           MRK+  GHS S FLG  TG  RA+PVSFAASAF V F
Sbjct: 192 MRKLGAGHSRSRFLGTSTGSPRAKPVSFAASAFSVVF 228

BLAST of MELO.jh026620.1 vs. ExPASy TrEMBL
Match: A0A5A7VJF7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold538G00010 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 1.34e-36
Identity = 66/85 (77.65%), Postives = 69/85 (81.18%), Query Frame = 0

Query: 2   RKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGFGTGRAFATRWKHWPSFGPFWVAPH 61
           RK+SPGHS S FLG  TG  RA+PVSFAASAF V   TGRAFATRWK  PSFGPFWVAP 
Sbjct: 16  RKLSPGHSRSRFLGTSTGSPRAQPVSFAASAFPVVSDTGRAFATRWKLRPSFGPFWVAPQ 75

Query: 62  FSLQRARIPTYTSGKCVWEHARSVG 86
           FSL+RAR PTYTSGK V EHARSVG
Sbjct: 76  FSLKRARFPTYTSGKRVREHARSVG 100

BLAST of MELO.jh026620.1 vs. ExPASy TrEMBL
Match: A0A5A7V5Z6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001940 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 1.10e-31
Identity = 61/81 (75.31%), Postives = 63/81 (77.78%), Query Frame = 0

Query: 2   RKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGFGTGRAFATRWKHWPSFGPFWVAPH 61
           RK+SP HS SHFLG  T   RA PVSFAASAF V   TGRAF +RWKHWPSFGPFWVAP 
Sbjct: 29  RKLSPRHSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFTSRWKHWPSFGPFWVAPQ 88

Query: 62  FSLQRARIPTYTSGKCVWEHA 82
           FSLQRAR PTYT GK V EHA
Sbjct: 89  FSLQRARFPTYTFGKHVREHA 109

BLAST of MELO.jh026620.1 vs. ExPASy TrEMBL
Match: A0A5D3BQ75 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00560 PE=4 SV=1)

HSP 1 Score: 123 bits (308), Expect = 2.41e-31
Identity = 61/81 (75.31%), Postives = 63/81 (77.78%), Query Frame = 0

Query: 2   RKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGFGTGRAFATRWKHWPSFGPFWVAPH 61
           RK+SP HS SHFLG  T   RA PVSFAASAF V   TGRAFA+RWKHWPSFGPFWVAP 
Sbjct: 29  RKLSPRHSRSHFLGTSTESPRALPVSFAASAFSVVSDTGRAFASRWKHWPSFGPFWVAPQ 88

Query: 62  FSLQRARIPTYTSGKCVWEHA 82
           FSLQRAR PTYT  K V EHA
Sbjct: 89  FSLQRARFPTYTFEKHVREHA 109

BLAST of MELO.jh026620.1 vs. ExPASy TrEMBL
Match: A0A5A7TUM9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19358G00010 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.37e-05
Identity = 25/37 (67.57%), Postives = 27/37 (72.97%), Query Frame = 0

Query: 1   MRKMSPGHSCSHFLGMKTGCSRARPVSFAASAFRVGF 37
           MRK+  GHS S FLG  TG  RA+PVSFAASAF V F
Sbjct: 192 MRKLGAGHSRSRFLGTSTGSPRAKPVSFAASAFSVVF 228

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065855.12.77e-3677.65hypothetical protein E6C27_scaffold538G00010 [Cucumis melo var. makuwa][more]
KAA0062674.12.26e-3175.31uncharacterized protein E6C27_scaffold79G001940 [Cucumis melo var. makuwa][more]
TYK01208.14.97e-3175.31uncharacterized protein E5676_scaffold2044G00560 [Cucumis melo var. makuwa][more]
KAA0046850.16.97e-0567.57hypothetical protein E6C27_scaffold19358G00010 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VJF71.34e-3677.65Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5A7V5Z61.10e-3175.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BQ752.41e-3175.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TUM93.37e-0567.57Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh026620.1.t1MELO.jh026620.1.t1mRNA