MELO.jh026582.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh026582.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr12: 14609197 .. 14609431 (-)
RNA-Seq ExpressionMELO.jh026582.1
SyntenyMELO.jh026582.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGATCCAAATGGATTTGAGAAGTTGCTTATTGATGCTGAAAAACCATTGTACGAAAGGCTATTTAGAAGTATTGAATGTGCTGAGAAGGTAATGGAGAATGATTTCAGCATCACTTTTTCACTACCCACGACCTTTTTGGCATTAGTCGAAAGACTTCTGTGCTTCGAGAGGATATCATTGATCTTTGTAACATGAACGAAGTCAAAACGTTTACATTGGTGGCCTATATGAT

mRNA sequence

AAAGATCCAAATGGATTTGAGAAGTTGCTTATTGATGCTGAAAAACCATTGTACGAAAGGCTATTTAGAAGTATTGAATGTGCTGAGAAGGTAATGGAGAATGATTTCAGCATCACTTTTTCACTACCCACGACCTTTTTGGCATTAGTCGAAAGACTTCTGTGCTTCGAGAGGATATCATTGATCTTTGTAACATGAACGAAGTCAAAACGTTTACATTGGTGGCCTATATGAT

Coding sequence (CDS)

ATGGAGAATGATTTCAGCATCACTTTTTCACTACCCACGACCTTTTTGGCATTAGTCGAAAGACTTCTGTGCTTCGAGAGGATATCATTGATCTTTGTAACATGA

Protein sequence

MENDFSITFSLPTTFLALVERLLCFERISLIFVT
Homology
[Close]
BLAST of MELO.jh026582.1 vs. NCBI nr
Match: KAA0026064.1 (uncharacterized protein E6C27_scaffold581G00550 [Cucumis melo var. makuwa] >TYK22862.1 uncharacterized protein E5676_scaffold115G00490 [Cucumis melo var. makuwa])

HSP 1 Score: 52.4 bits (124), Expect = 3.46e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   MENDFSITFSLPTTFLALVERLLCFERISLIFVT 34
           ME D SITF  P TFLALV+R LCFERISLIFVT
Sbjct: 78  MEKDSSITFHYPLTFLALVKRFLCFERISLIFVT 111

[Close]
BLAST of MELO.jh026582.1 vs. ExPASy TrEMBL
Match: A0A5A7SK35 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold115G00490 PE=4 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 1.68e-07
Identity = 27/34 (79.41%), Postives = 28/34 (82.35%), Query Frame = 0 

Query: 1   MENDFSITFSLPTTFLALVERLLCFERISLIFVT 34
           ME D SITF  P TFLALV+R LCFERISLIFVT
Sbjct: 78  MEKDSSITFHYPLTFLALVKRFLCFERISLIFVT 111

The following BLAST results are available for this feature:
BLAST of MELO.jh026582.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0026064.13.46e-0779.41uncharacterized protein E6C27_scaffold581G00550 [Cucumis melo var. makuwa] >TYK2... [more]
BLAST of MELO.jh026582.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh026582.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7SK351.68e-0779.41Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
BLAST of MELO.jh026582.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh026582.1.t1MELO.jh026582.1.t1mRNA