MELO.jh025886.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh025886.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionATPase subunit 1 (Mitochondrion)
Locationchr12: 924849 .. 925209 (-)
RNA-Seq ExpressionMELO.jh025886.1
SyntenyMELO.jh025886.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAGAATTTGTCAACGGTGACAAAAGAAATAGCCTTAAATCTTGAGAATGAGAATATAGGGATTGTTGTCTTTGGTAGTGATATCACTATTAAAGAAGGAGATCTTGTCAAGCGCATTGGATCAATTATGGATATTTCAGCAAGAAAGGTTATGCTCGAGCGTATGGTCGGTGCCTTGGAAGCACCCATTGATGGAAGAGGGGCTTTCAACGATCACGAGTGAAGACGTATCAAAGTGAAAGCCCTTAGGATAATTGAAGGCAAATAAGTGTACGAGCCTATGAAAACAGGGTTAAAAACGGTGGATAGCCTAGTTCCTATAGGTAGGGGTCGACGAGAATTGATAATCAAGGAGTAA

mRNA sequence

ATGGTAGAATTTGTCAACGGTGACAAAAGAAATAGCCTTAAATCTTGAGAATGAGAATATAGGGATTGTTGTCTTTGGTAGTGATATCACTATTAAAGAAGGAGATCTTGTCAAGCGCATTGGATCAATTATGGATATTTCAGCAAGAAAGGTTATGCTCGAGCGTATGGTCGGTGCCTTGGAAGCACCCATTGATGGAAGAGGGGCTTTCAACGATCACGAGTGAAGACGTATCAAAGTGAAAGCCCTTAGGATAATTGAAGGCAAATAAGTGTACGAGCCTATGAAAACAGGGTTAAAAACGGTGGATAGCCTAGTTCCTATAGGTAGGGGTCGACGAGAATTGATAATCAAGGAGTAA

Coding sequence (CDS)

ATGGATATTTCAGCAAGAAAGGTTATGCTCGAGCGTATGGTCGGTGCCTTGGAAGCACCCATTGATGGAAGAGGGGCTTTCAACGATCACGAGTGA

Protein sequence

MDISARKVMLERMVGALEAPIDGRGAFNDHE
Homology
BLAST of MELO.jh025886.1 vs. NCBI nr
Match: TYJ97310.1 (ATPase subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 5.82e-12
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
           MDISARKVMLERMVGALEAPIDGRGAFNDHE
Sbjct: 125 MDISARKVMLERMVGALEAPIDGRGAFNDHE 155

BLAST of MELO.jh025886.1 vs. NCBI nr
Match: KAA0031824.1 (ATPase subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 65.5 bits (158), Expect = 5.94e-12
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
           MDISARKVMLERMVGALEAPIDGRGAFNDHE
Sbjct: 126 MDISARKVMLERMVGALEAPIDGRGAFNDHE 156

BLAST of MELO.jh025886.1 vs. NCBI nr
Match: KAA0051946.1 (ATPase subunit 1 [Cucumis melo var. makuwa] >TYK12214.1 ATPase subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 58.9 bits (141), Expect = 3.94e-09
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0

Query: 1  MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
          MDI ARKVML RMVGALEAPIDGRGAF+DHE
Sbjct: 44 MDIPARKVMLGRMVGALEAPIDGRGAFSDHE 74

BLAST of MELO.jh025886.1 vs. NCBI nr
Match: KAA0051944.1 (ATPase subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 52.0 bits (123), Expect = 3.93e-07
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 1  MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
          MDI  RKVML RMVGAL APIDG+GAF+DH+
Sbjct: 44 MDIPVRKVMLGRMVGALGAPIDGKGAFSDHK 74

BLAST of MELO.jh025886.1 vs. NCBI nr
Match: KAA0051941.1 (ATPase subunit 1 [Cucumis melo var. makuwa] >TYK12218.1 ATPase subunit 1 [Cucumis melo var. makuwa])

HSP 1 Score: 52.8 bits (125), Expect = 7.63e-07
Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
           MDI ARKVML RMV AL APIDGRG FNDH+
Sbjct: 131 MDIPARKVMLGRMVSALGAPIDGRGVFNDHK 161

BLAST of MELO.jh025886.1 vs. ExPASy TrEMBL
Match: A0A5D3BBV6 (ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold194G001130 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.82e-12
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
           MDISARKVMLERMVGALEAPIDGRGAFNDHE
Sbjct: 125 MDISARKVMLERMVGALEAPIDGRGAFNDHE 155

BLAST of MELO.jh025886.1 vs. ExPASy TrEMBL
Match: A0A5A7SKY0 (ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold848G00710 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 2.88e-12
Identity = 31/31 (100.00%), Postives = 31/31 (100.00%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
           MDISARKVMLERMVGALEAPIDGRGAFNDHE
Sbjct: 126 MDISARKVMLERMVGALEAPIDGRGAFNDHE 156

BLAST of MELO.jh025886.1 vs. ExPASy TrEMBL
Match: A0A5A7UCL8 (ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00010 PE=3 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 1.91e-09
Identity = 28/31 (90.32%), Postives = 29/31 (93.55%), Query Frame = 0

Query: 1  MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
          MDI ARKVML RMVGALEAPIDGRGAF+DHE
Sbjct: 44 MDIPARKVMLGRMVGALEAPIDGRGAFSDHE 74

BLAST of MELO.jh025886.1 vs. ExPASy TrEMBL
Match: A0A5A7U9C2 (ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold60G004080 PE=3 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.90e-07
Identity = 24/31 (77.42%), Postives = 27/31 (87.10%), Query Frame = 0

Query: 1  MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
          MDI  RKVML RMVGAL APIDG+GAF+DH+
Sbjct: 44 MDIPVRKVMLGRMVGALGAPIDGKGAFSDHK 74

BLAST of MELO.jh025886.1 vs. ExPASy TrEMBL
Match: A0A5A7UEG9 (ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold769G00160 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 3.69e-07
Identity = 25/31 (80.65%), Postives = 26/31 (83.87%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 31
           MDI ARKVML RMV AL APIDGRG FNDH+
Sbjct: 131 MDIPARKVMLGRMVSALGAPIDGRGVFNDHK 161

BLAST of MELO.jh025886.1 vs. TAIR 10
Match: AT2G07698.1 (ATPase, F1 complex, alpha subunit protein )

HSP 1 Score: 40.4 bits (93), Expect = 3.0e-04
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 32
           +D+ A K ML R+V A+  PIDG+GA +DHE
Sbjct: 367 VDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 397

BLAST of MELO.jh025886.1 vs. TAIR 10
Match: ATMG01190.1 (ATP synthase subunit 1 )

HSP 1 Score: 40.4 bits (93), Expect = 3.0e-04
Identity = 17/31 (54.84%), Postives = 23/31 (74.19%), Query Frame = 0

Query: 1   MDISARKVMLERMVGALEAPIDGRGAFNDHE 32
           +D+ A K ML R+V A+  PIDG+GA +DHE
Sbjct: 97  VDVPAGKAMLGRVVDAMGVPIDGKGALSDHE 127

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TYJ97310.15.82e-12100.00ATPase subunit 1 [Cucumis melo var. makuwa][more]
KAA0031824.15.94e-12100.00ATPase subunit 1 [Cucumis melo var. makuwa][more]
KAA0051946.13.94e-0990.32ATPase subunit 1 [Cucumis melo var. makuwa] >TYK12214.1 ATPase subunit 1 [Cucumi... [more]
KAA0051944.13.93e-0777.42ATPase subunit 1 [Cucumis melo var. makuwa][more]
KAA0051941.17.63e-0780.65ATPase subunit 1 [Cucumis melo var. makuwa] >TYK12218.1 ATPase subunit 1 [Cucumi... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3BBV62.82e-12100.00ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7SKY02.88e-12100.00ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5A7UCL81.91e-0990.32ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A5A7U9C21.90e-0777.42ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A5A7UEG93.69e-0780.65ATPase subunit 1 (Mitochondrion) OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
Match NameE-valueIdentityDescription
AT2G07698.13.0e-0454.84ATPase, F1 complex, alpha subunit protein [more]
ATMG01190.13.0e-0454.84ATP synthase subunit 1 [more]
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh025886.1.t1MELO.jh025886.1.t1mRNA