MELO.jh024924.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh024924.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionNBS-LRR type resistance protein
Locationchr11: 25944459 .. 25945174 (-)
RNA-Seq ExpressionMELO.jh024924.1
SyntenyMELO.jh024924.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAGGAGAAATCACGGACGAACAAGGCTGCTAGACAGAGGCAGCCTTACAATCATAGTAGCAGTCCAAGTCGTTTCTACAACGACAGTACGAGCTCGCTGAGAGAAAAAGGGAGCTGGTCTATCGTGTGGAGTTTTTCCAACAAGCACATGTTCGAGCTGGGACGTTCGTGTCGCAGGCCACCGAGGATGCGTATGTAAGTTATGCCCTTATTAATTATCCTCTTTCATTATATATTTTTGCGCGTTACCTAACATAGTTTTTAAATTTGTTGCAGAATAAAATGTTGGAACTCCAATCCCAACCTACCTCAGAGGGTAGTTAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGTGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCACAGGACGACGAGTTCGAGCAGTTCGTCGACATCTTGTTCGCAGTCCACATAAAAAGAGATTGAATTACAAGCTAAACTTAATGAAGTTTTGGAACGGATTGAAGTGCAACATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAACATTGAAAAAGATGGTGGAAGAATTAACTCATGCACAATAGAGACCACCACATGATCCCTAGCTCTGCGGTACTTTTTGTTATGTTTGCGTTTTTTTGTATTATGATAACTACATTTTTGTATTAAACTTACTAATATTTTGTTAACTTATT

mRNA sequence

ATGCAGGAGAAATCACGGACGAACAAGGCTGCTAGACAGAGGCAGCCTTACAATCATAGTAGCAGTCCAAGTCGTTTCTACAACGACAGTACGAGCTCGCTGAGAGAAAAAGGGAGCTGGTCTATCGTGTGGAGTTTTTCCAACAAGCACATGTTCGAGCTGGGACGTTCGTGTCGCAGGCCACCGAGGATGCAATAAAATGTTGGAACTCCAATCCCAACCTACCTCAGAGGGTAGTTAGCCACTCTCTGAGGATGAGATATGCGATCAGGTGTTGTGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCACAGGACGACGAGTTCGAGCAGTTCGTCGACATCTTGTTCGCAGTCCACATAAAAAGAGATTGAATTACAAGCTAAACTTAATGAAGTTTTGGAACGGATTGAAGTGCAACATAGAAATCACCAAGCATTAGCTTCACAAGTGGAAACATTGAAAAAGATGGTGGAAGAATTAACTCATGCACAATAGAGACCACCACATGATCCCTAGCTCTGCGGTACTTTTTGTTATGTTTGCGTTTTTTTGTATTATGATAACTACATTTTTGTATTAAACTTACTAATATTTTGTTAACTTATT

Coding sequence (CDS)

ATGAGATATGCGATCAGGTGTTGTGTAGACGACCAGGCTACTCAAAAGGCCTTGGTTGGGGACCCAAGCCGAAGGCCCACAGGACGACGAGTTCGAGCAGTTCGTCGACATCTTGTTCGCAGTCCACATAAAAAGAGATTGAATTACAAGCTAAACTTAATGAAGTTTTGGAACGGATTGAAGTGCAACATAGAAATCACCAAGCATTAG

Protein sequence

MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGLKCNIEITKH
Homology
BLAST of MELO.jh024924.1 vs. NCBI nr
Match: KAA0048671.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 120 bits (302), Expect = 2.18e-33
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIRC VDDQATQKALVGDPSRRP  R+V+AVRRH VRSPHKKRLNYKLN MK WNGL
Sbjct: 57  MRYAIRCWVDDQATQKALVGDPSRRPAERQVQAVRRHFVRSPHKKRLNYKLNFMKLWNGL 116

Query: 61  KCNIEITKH 69
           K  IEITKH
Sbjct: 117 KYKIEITKH 125

BLAST of MELO.jh024924.1 vs. NCBI nr
Match: TYK02447.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 118 bits (296), Expect = 6.78e-33
Identity = 58/69 (84.06%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 1  MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
          MRYAIRC VDD ATQKALVGDPSRRP  RRV+AVRRHL+RSP KKRLNYKLN MK WNGL
Sbjct: 24 MRYAIRCWVDDHATQKALVGDPSRRPVERRVQAVRRHLIRSPQKKRLNYKLNFMKLWNGL 83

Query: 61 KCNIEITKH 69
          K  IEITKH
Sbjct: 84 KYKIEITKH 92

BLAST of MELO.jh024924.1 vs. NCBI nr
Match: KAA0047463.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ98661.1 CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 124 bits (312), Expect = 7.82e-33
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIR  VD+QA QKALVGDPSRRP GRRVRAVR+HLVRSPHKKRLNYKLNLMK WNGL
Sbjct: 242 MRYAIRYLVDNQAIQKALVGDPSRRPAGRRVRAVRQHLVRSPHKKRLNYKLNLMKLWNGL 301

Query: 61  KCNIEITKH 69
           KC IEITKH
Sbjct: 302 KCKIEITKH 310

BLAST of MELO.jh024924.1 vs. NCBI nr
Match: KAA0037192.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK13880.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (292), Expect = 4.04e-32
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIRCCVDDQATQK LVGDPSRRP  RRV+AVR+HLV SP KK LNYKLN MK WNGL
Sbjct: 37  MRYAIRCCVDDQATQKVLVGDPSRRPAERRVQAVRQHLVHSPQKKILNYKLNFMKLWNGL 96

Query: 61  KCNIEITKH 69
           K  IEITKH
Sbjct: 97  KYKIEITKH 105

BLAST of MELO.jh024924.1 vs. NCBI nr
Match: TYK05099.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 116 bits (291), Expect = 1.03e-31
Identity = 59/69 (85.51%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIR  VDDQATQKALVGDPSRRP  RRV+AVRRHLVRSP KKRLNYKLN MK WNGL
Sbjct: 57  MRYAIRYWVDDQATQKALVGDPSRRPAERRVQAVRRHLVRSPQKKRLNYKLNFMKLWNGL 116

Query: 61  KCNIEITKH 69
           K  IEITKH
Sbjct: 117 KYKIEITKH 125

BLAST of MELO.jh024924.1 vs. ExPASy TrEMBL
Match: A0A5A7U512 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold670G00200 PE=4 SV=1)

HSP 1 Score: 120 bits (302), Expect = 1.06e-33
Identity = 59/69 (85.51%), Postives = 61/69 (88.41%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIRC VDDQATQKALVGDPSRRP  R+V+AVRRH VRSPHKKRLNYKLN MK WNGL
Sbjct: 57  MRYAIRCWVDDQATQKALVGDPSRRPAERQVQAVRRHFVRSPHKKRLNYKLNFMKLWNGL 116

Query: 61  KCNIEITKH 69
           K  IEITKH
Sbjct: 117 KYKIEITKH 125

BLAST of MELO.jh024924.1 vs. ExPASy TrEMBL
Match: A0A5D3BSP0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00560 PE=4 SV=1)

HSP 1 Score: 118 bits (296), Expect = 3.28e-33
Identity = 58/69 (84.06%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 1  MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
          MRYAIRC VDD ATQKALVGDPSRRP  RRV+AVRRHL+RSP KKRLNYKLN MK WNGL
Sbjct: 24 MRYAIRCWVDDHATQKALVGDPSRRPVERRVQAVRRHLIRSPQKKRLNYKLNFMKLWNGL 83

Query: 61 KCNIEITKH 69
          K  IEITKH
Sbjct: 84 KYKIEITKH 92

BLAST of MELO.jh024924.1 vs. ExPASy TrEMBL
Match: A0A5D3BIY8 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold507G00510 PE=4 SV=1)

HSP 1 Score: 124 bits (312), Expect = 3.79e-33
Identity = 61/69 (88.41%), Postives = 63/69 (91.30%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIR  VD+QA QKALVGDPSRRP GRRVRAVR+HLVRSPHKKRLNYKLNLMK WNGL
Sbjct: 242 MRYAIRYLVDNQAIQKALVGDPSRRPAGRRVRAVRQHLVRSPHKKRLNYKLNLMKLWNGL 301

Query: 61  KCNIEITKH 69
           KC IEITKH
Sbjct: 302 KCKIEITKH 310

BLAST of MELO.jh024924.1 vs. ExPASy TrEMBL
Match: A0A5A7T163 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G00670 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 1.96e-32
Identity = 57/69 (82.61%), Postives = 59/69 (85.51%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIRCCVDDQATQK LVGDPSRRP  RRV+AVR+HLV SP KK LNYKLN MK WNGL
Sbjct: 37  MRYAIRCCVDDQATQKVLVGDPSRRPAERRVQAVRQHLVHSPQKKILNYKLNFMKLWNGL 96

Query: 61  KCNIEITKH 69
           K  IEITKH
Sbjct: 97  KYKIEITKH 105

BLAST of MELO.jh024924.1 vs. ExPASy TrEMBL
Match: A0A5D3C3Z9 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1769G00020 PE=4 SV=1)

HSP 1 Score: 116 bits (291), Expect = 4.99e-32
Identity = 59/69 (85.51%), Postives = 60/69 (86.96%), Query Frame = 0

Query: 1   MRYAIRCCVDDQATQKALVGDPSRRPTGRRVRAVRRHLVRSPHKKRLNYKLNLMKFWNGL 60
           MRYAIR  VDDQATQKALVGDPSRRP  RRV+AVRRHLVRSP KKRLNYKLN MK WNGL
Sbjct: 57  MRYAIRYWVDDQATQKALVGDPSRRPAERRVQAVRRHLVRSPQKKRLNYKLNFMKLWNGL 116

Query: 61  KCNIEITKH 69
           K  IEITKH
Sbjct: 117 KYKIEITKH 125

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0048671.12.18e-3385.51NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
TYK02447.16.78e-3384.06NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0047463.17.82e-3388.41CACTA en-spm transposon protein [Cucumis melo var. makuwa] >TYJ98661.1 CACTA en-... [more]
KAA0037192.14.04e-3282.61NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYK13880.1 NBS-LRR t... [more]
TYK05099.11.03e-3185.51NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U5121.06e-3385.51NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BSP03.28e-3384.06NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3BIY83.79e-3388.41CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7T1631.96e-3282.61NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3C3Z94.99e-3285.51NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh024924.1.t1MELO.jh024924.1.t1mRNA