MELO.jh024297.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh024297.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr11: 14650105 .. 14650442 (+)
RNA-Seq ExpressionMELO.jh024297.1
SyntenyMELO.jh024297.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATCTGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTACATATAGTGACCAGGCTTAGAGCCAAACTTTTTGATAGAGAAGGCGCTCTCTCAATCGTTCTGCCTATTCTGCTGTATTTTCCTCTGTCAGCTGATGGTTCAGATAGTCTAAGCTACGATGGTAGAAAAGGTAAAAGACATGGGCGTGGGCAATCATATTCAAGTGGTTATGGGGGTTTCAATGATTTGGCTGGTGGTGATGGTTATGGAAGCTACGGTGGCTCACAAGTACATATATTAACCTTGACATGTCTGATTATAGCAATGGGGACTGTGGTTCCATCTACTTTTAGAGTTAA

mRNA sequence

ATATCTGGGGATCTTGATGTTGCCAAGGAGGCTCTTGTACATATAGTGACCAGGCTTAGAGCCAAACTTTTTGATAGAGAAGGCGCTCTCTCAATCGTTCTGCCTATTCTGCTGTATTTTCCTCTGTCAGCTGATGGTTCAGATAGTCTAAGCTACGATGGTAGAAAAGGTAAAAGACATGGGCGTGGGCAATCATATTCAAGTGGTTATGGGGGTTTCAATGATTTGGCTGGTGGTGATGGTTATGGAAGCTACGGTGGCTCACAAGTACATATATTAACCTTGACATGTCTGATTATAGCAATGGGGACTGTGGTTCCATCTACTTTTAGAGTTAA

Coding sequence (CDS)

ATGGTAGAAAAGGTAAAAGACATGGGCGTGGGCAATCATATTCAAGTGGTTATGGGGGTTTCAATGATTTGGCTGGTGGTGATGGTTATGGAAGCTACGGTGGCTCACAAGTACATATATTAA

Protein sequence

MVEKVKDMGVGNHIQVVMGVSMIWLVVMVMEATVAHKYIY
Homology
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BLAST of MELO.jh024297.1 vs. NCBI nr
Match: KAG6578572.1 (RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 52.0 bits (123), Expect = 4.12e-06
Identity = 27/35 (77.14%), Postives = 29/35 (82.86%), Query Frame = 0 

Query: 3   EKVKDMGVGNHIQVVMGVSMIWLVVMVMEATVAHK 37
           EK KDMGVG  I VVMGVS IWL+VMVME TVAH+
Sbjct: 450 EKAKDMGVGILILVVMGVSRIWLLVMVMEVTVAHR 484

The following BLAST results are available for this feature:
BLAST of MELO.jh024297.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6578572.14.12e-0677.14RNA-binding KH domain-containing protein RCF3, partial [Cucurbita argyrosperma s... [more]
BLAST of MELO.jh024297.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh024297.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh024297.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh024297.1.t1MELO.jh024297.1.t1mRNA