MELO.jh022827.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh022827.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr10: 15426522 .. 15426890 (-)
RNA-Seq ExpressionMELO.jh022827.1
SyntenyMELO.jh022827.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAGTTCGTCTGCCATCAGTTTTCGCCATCGCCACAAGATATCACACATTTCCACAGTCTCTTCCGCTTCCAGTTCGCCACAAGTTCGTCATCCCATTTTCGATCAATCTGCTCAAGCCGCTGTCGTCTACTCGCAACGTCCACCACCAGTTCGATCAATCTTCTCTGCAGATGTTCTTCTTGTCGGATGACCACCTCGTACGCATCACACAAACGACCATCTGGTACGTTCTTCGGCCACGCATCAGAGATTACCACCTCGTACATTCTTTAGCCGATTATCATAGATGTACCAGACGTACGTTCCTCAGTCGCGCATCACATAAATCGCCAGACATTCCTCAGCCGCGCATCACAGAGACTCCTCAAG

mRNA sequence

AAGTTCGTCTGCCATCAGTTTTCGCCATCGCCACAAGATATCACACATTTCCACAGTCTCTTCCGCTTCCAGTTCGCCACAAGTTCGTCATCCCATTTTCGATCAATCTGCTCAAGCCGCTGTCGTCTACTCGCAACGTCCACCACCAGTTCGATCAATCTTCTCTGCAGATGTTCTTCTTGTCGGATGACCACCTCGTACGCATCACACAAACGACCATCTGGTACGTTCTTCGGCCACGCATCAGAGATTACCACCTCGTACATTCTTTAGCCGATTATCATAGATGTACCAGACGTACGTTCCTCAGTCGCGCATCACATAAATCGCCAGACATTCCTCAGCCGCGCATCACAGAGACTCCTCAAG

Coding sequence (CDS)

ATGTTCTTCTTGTCGGATGACCACCTCGTACGCATCACACAAACGACCATCTGGTACGTTCTTCGGCCACGCATCAGAGATTACCACCTCGTACATTCTTTAGCCGATTATCATAGATGTACCAGACGTACGTTCCTCAGTCGCGCATCACATAAATCGCCAGACATTCCTCAGCCGCGCATCACAGAGACTCCTCAA

Protein sequence

MFFLSDDHLVRITQTTIWYVLRPRIRDYHLVHSLADYHRCTRRTFLSRASHKSPDIPQPRITETPQ
Homology
[Close]
BLAST of MELO.jh022827.1 vs. ExPASy TrEMBL
Match: A0A5A7U101 (Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00350 PE=4 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 8.45e-04
Identity = 21/27 (77.78%), Postives = 23/27 (85.19%), Query Frame = 0 

Query: 40  CTRRTFLSRASHKSPDIPQPRITETPQ 66
           CTR TFLSR SHKSP++PQ RITET Q
Sbjct: 209 CTRPTFLSRTSHKSPNVPQSRITETLQ 235

The following BLAST results are available for this feature:
BLAST of MELO.jh022827.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh022827.1 vs.
Match NameE-valueIdentityDescription
BLAST of MELO.jh022827.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U1018.45e-0477.78Transposase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold109G00350 PE... [more]
BLAST of MELO.jh022827.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh022827.1.t1MELO.jh022827.1.t1mRNA