MELO.jh022740.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh022740.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Gag protease polyprotein
Location	chr10: 13141830 .. 13144727 (+)
RNA-Seq Expression	MELO.jh022740.1
Synteny	MELO.jh022740.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTCTCCGTCAAGCCCGTGCCTCACTCCTCTCCACTGTGAATCTTTGTTCCGCCGTCCGCTGCTGGTTCTACCCTTTGCCGCCGCCGCTCACCGTCGTAAGTTTGGGTGAGTTTTTTTTTCCGATCTTTATGGTTATGGTGGGTTTTGAACTACTCATTAAAGGTTAGGTAAGACTCTAAATTAAGTTTTTTTTTTTTTTTTTTAATTCTTTTTATTTTTACTAAAGATGGGATTTTCTTGACCTTGAAGGTGCTATTGGAATCCTCTTGATTCAATTCTGGATTTTCCATCAAGTTTGTGATTTAGTTCAACCCCCAATTTGGGTAAGTTGGGAAAACTTAATTTAATTAAATTGATAATGTTTGTTGGCAAAATTTATTAATTTAATTTTTGTTATGTATACGTTTGAATTTGGGTATTAGTTTGCAATAAGGAATTCTTACCAAGCCGCAAGAGATTTCTACGGACCTTCGAACTAATGTTTAATTATGCGGAATGGAATGATGATTGATTATGCATAGACGATAAAATACATTGATAGGCTTATACGAGAGTTTGACTGAAATTGTTTAACTGTGTGACTAAATATATAACTGTGGAGCTATTGAATGATGTTATATCTTATGCCTATTATTGGACTGACTGTTGTATCTATTTGGACTGATGGTATAATTGTTAGCTTTGGCTATTAGGTTAGTTTTGTCTCTCGCAATCACCACCTTATATTGATTGACTTAACGTTTAAGTGTACCCTTAGGGTCACTTTACCACTAAGCTACCTTCTAATAGGAAGTCAACTACCTTTTAATGGGAAGTTAATAGTTGGGATCGAGACTAGTTGTGCAGAGTATTTTTATAATTTTTGCGGGATTGGAGTATTTTTTTTATATTCACAATTTTTCTATGTAACTTTTCAAGCAAAGAGGGAGAGGAACAACAAAAAAGATCTTGACGTGCCATATAGGGACTCTAGTTTTGTTTCCGCTAATTCCATGTTTTCTATGTTTTGAATGCTAAAAGTTTTCTTTCCTCATTGTTAAGAACTTTGTGAACATTTTACTATATATTTTCTTTAACATTAGATAGGACCCGAATTAGATATGCTTTCCTAGTACTTTTTTGCTGGTTTGCCAAACTCTTATTTTCAGATTGTTTGTTTTACTTTTATTTAATGAAATTAGTAGACTTTGTTTTGTTTTAAAAGTTTGAAAAACTTTATTTATTTAAAGTAATGACCTCAACTTAGATTCGAAAAATTGGGTTGTTATAGTTGATATCAAAGCATAAGTTTTAGAGTATGTAACTGACTTAGGATGTGAGTCCATGATTTTTTCCCTATGGCTAATACGGTTTTTCGTTCGTTAGATATGTTTTCATGATAAATGTTTATAGCTATGTACATGACTTTACCTATGTTAAACTAGAATTATATGGAATGTTATGACTAAAATTTAAAGGATTTTTTTGGTGGAATTTAGGAAAATGACACCACGTAGAAGTGCTCGTAGGGGTGATCAAGGAGGCAGAGGAGTAGGGTGTAATCAACCTGCTGAACAAGTTGCTAACCCTGTTGCACCCATTACCCATGCTGATCTTACTCAGCTAGAGCAGAGGTTTAATGACACAGTGACTGAAGTGTTGGCACGACATCAGCTAGCCCAAGCAGCCCTTGCTCAAGGTCAAACAGCACAACAAGACCTACCAGATCAGTTGTCAGTTGAGGCTAAGCATTTGAGGGATTTCAGAATATATGATCCACAAACTTTTAATGGATCGCTGGAGGATCCCATTAGCACGAAGTTATGGTTATCTTCTGTGGAGACCATCTTCCGTTTCATGAGATGTCCTGACGACCAGAAGGTCCAGTGTGCCGTGTTCCTACTGAGGGAGAGAGCTGCCATTTGGTGGCAGTCAGTAGAAAGGATGCTTGGTGGTAATGTTAACCAGATTACGTGGGACCAGTTCAAGGAGAGTTTTTATGCTAAGTTTTTACCTTCTAGCCTCAGGGATGCCAAACGTCAAGAGTTCATAAACCTGAAGCAAGGTCAAATGACGGTTGAGGAGTACGACTATGAGTTTGACATGCTATCCCTCTTTGCCCCTGAGTTGGTTGAGACTGAGGCTGCTAGAGCTAAGATGTTTGTTTGGGGTTTGAGAAAGGATCTTCAAGGTTTTGTTCGAGCCTTCAAACCAGCCACCCAAACTGAAGCACTATACTTGGCGCTGGACTTGAGTGTCCAGAAGGACGATGACCTGTTGAAGGTATCAAGGAAGGGACCATTCTTAGGTCAGAAGAGAAGGCTGAGCAGAAGCTTGTTAATGTTCCACAGAGAAACTTGAGGTAAGGTGGGGCACTTCACCGTTACCAATAGGAGTTTGCTAAGGCAAGTAGAACTTTGAGAGATACCTTATTGCAATACTCTAGCAATTTTCTTTCACTCACTCGTATATACACTTTCAACCTGCATTTTTTTTTCTCTTTTCCCCCAAAAATATTTTTCTTAATTCACACAAAAAACCTAGCCTTTATCTATTTGGAAATTTCTTATTTTCTAATTATTTCATAAATCTGCCAAAACCACAACTAATTTCTTGCCTTCTACCTGAACTCTCTTTCACCATCCACCCGTTTTTCTCCCCTTCACCCCCCAACAAACCTCCACGTTTTTTCTCTTCTCCGTATTTTCTGGTTTAAGTAAGTTATTTATTTCTTATTAGTTTTGCTTCCTTCTATATTAGCACATTTCAATCTAAATGATATGTTCACATCTTCATATGCATAGTATTATTTGTCTACTAATCTTGAACACATATTGAATTCTATGTACATATTATATCTTTTTTTGTGAAGTCTCGGGCATATTGAACTTGTATATGTTAAATCTTTTAAGTTATTA

mRNA sequence

CTTCTCCGTCAAGCCCGTGCCTCACTCCTCTCCACTGTGAATCTTTGTTCCGCCGTCCGCTGCTGGTTCTACCCTTTGCCGCCGCCGCTCACCGTCGTAAGTTTGGGTGAGTTTTTTTTTCCGATCTTTATGGTTATGGTGGGTTTTGAACTACTCATTAAAGGTTAGGTGCTATTGGAATCCTCTTGATTCAATTCTGGATTTTCCATCAAGTTTGTGATTTAGTTCAACCCCCAATTTGGGAAAATGACACCACGTAGAAGTGCTCGTAGGGGTGATCAAGGAGGCAGAGGAGTAGGGTGTAATCAACCTGCTGAACAAGTTGCTAACCCTGTTGCACCCATTACCCATGCTGATCTTACTCAGCTAGAGCAGAGGTTTAATGACACAGTGACTGAAGTGTTGGCACGACATCAGCTAGCCCAAGCAGCCCTTGCTCAAGGTCAAACAGCACAACAAGACCTACCAGATCAGTTGTCAGTTGAGGCTAAGCATTTGAGGGATTTCAGAATATATGATCCACAAACTTTTAATGGATCGCTGGAGGATCCCATTAGCACGAAGTTATGGTTATCTTCTGTGGAGACCATCTTCCGTTTCATGAGATGTCCTGACGACCAGAAGGTCCAGTGTGCCGTGTTCCTACTGAGGGAGAGAGCTGCCATTTGGTGGCAGTCAGTAGAAAGGATGCTTGGTGGTAATGTTAACCAGATTACGTGGGACCAGTTCAAGGAGAGTTTTTATGCTAAGTTTTTACCTTCTAGCCTCAGGGATGCCAAACGTCAAGAGTTCATAAACCTGAAGCAAGGTCAAATGACGGTTGAGGAGTACGACTATGAGTTTGACATGCTATCCCTCTTTGCCCCTGAGTTGGTTGAGACTGAGGCTGCTAGAGCTAAGATGTTTGTTTGGGGTTTGAGAAAGGATCTTCAAGGTTTTGTTCGAGCCTTCAAACCAGCCACCCAAACTGAAGCACTATACTTGGCGCTGGACTTGAGTGTCCAGAAGGACGATGACCTGTTGAAGGTATCAAGGAAGGGACCATTCTTAGGTCAGAAGAGAAGGCTGAGCAGAAGCTTGTTAATGTTCCACAGAGAAACTTGAGGTAAGGTGGGGCACTTCACCGTTACCAATAGGAGTTTGCTAAGGCAAGTAGAACTTTGAGAGATACCTTATTGCAATACTCTAGCAATTTTCTTTCACTCACTCGTATATACACTTTCAACCTGCATTTTTTTTTCTCTTTTCCCCCAAAAATATTTTTCTTAATTCACACAAAAAACCTAGCCTTTATCTATTTGGAAATTTCTTATTTTCTAATTATTTCATAAATCTGCCAAAACCACAACTAATTTCTTGCCTTCTACCTGAACTCTCTTTCACCATCCACCCGTTTTTCTCCCCTTCACCCCCCAACAAACCTCCACGTTTTTTCTCTTCTCCGTATTTTCTGGTTTAAGTAAGTTATTTATTTCTTATTAGTTTTGCTTCCTTCTATATTAGCACATTTCAATCTAAATGATATGTTCACATCTTCATATGCATAGTATTATTTGTCTACTAATCTTGAACACATATTGAATTCTATGTACATATTATATCTTTTTTTGTGAAGTCTCGGGCATATTGAACTTGTATATGTTAAATCTTTTAAGTTATTA

Coding sequence (CDS)

ATGACACCACGTAGAAGTGCTCGTAGGGGTGATCAAGGAGGCAGAGGAGTAGGGTGTAATCAACCTGCTGAACAAGTTGCTAACCCTGTTGCACCCATTACCCATGCTGATCTTACTCAGCTAGAGCAGAGGTTTAATGACACAGTGACTGAAGTGTTGGCACGACATCAGCTAGCCCAAGCAGCCCTTGCTCAAGGTCAAACAGCACAACAAGACCTACCAGATCAGTTGTCAGTTGAGGCTAAGCATTTGAGGGATTTCAGAATATATGATCCACAAACTTTTAATGGATCGCTGGAGGATCCCATTAGCACGAAGTTATGGTTATCTTCTGTGGAGACCATCTTCCGTTTCATGAGATGTCCTGACGACCAGAAGGTCCAGTGTGCCGTGTTCCTACTGAGGGAGAGAGCTGCCATTTGGTGGCAGTCAGTAGAAAGGATGCTTGGTGGTAATGTTAACCAGATTACGTGGGACCAGTTCAAGGAGAGTTTTTATGCTAAGTTTTTACCTTCTAGCCTCAGGGATGCCAAACGTCAAGAGTTCATAAACCTGAAGCAAGGTCAAATGACGGTTGAGGAGTACGACTATGAGTTTGACATGCTATCCCTCTTTGCCCCTGAGTTGGTTGAGACTGAGGCTGCTAGAGCTAAGATGTTTGTTTGGGGTTTGAGAAAGGATCTTCAAGGTTTTGTTCGAGCCTTCAAACCAGCCACCCAAACTGAAGCACTATACTTGGCGCTGGACTTGAGTGTCCAGAAGGACGATGACCTGTTGAAGGTATCAAGGAAGGGACCATTCTTAGGTCAGAAGAGAAGGCTGAGCAGAAGCTTGTTAATGTTCCACAGAGAAACTTGA

Protein sequence

MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQAALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQTEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET

Homology

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BLAST of MELO.jh022740.1 vs. NCBI nr
Match: XP_008456947.1 (PREDICTED: uncharacterized protein LOC103496742 [Cucumis melo] >XP_008456948.1 PREDICTED: uncharacterized protein LOC103496742 [Cucumis melo] >ADN33714.1 ty3-gypsy retrotransposon protein [Cucumis melo subsp. melo] >KAA0066978.1 gag protease polyprotein [Cucumis melo var. makuwa] >TYJ96787.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 566 bits (1459), Expect = 1.76e-203
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60
           MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ
Sbjct: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60

Query: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120
           AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR
Sbjct: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120

Query: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180
           CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ
Sbjct: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180

Query: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240
           EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ
Sbjct: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240

Query: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285
           TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET
Sbjct: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285

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BLAST of MELO.jh022740.1 vs. NCBI nr
Match: XP_011655042.1 (uncharacterized protein LOC101209878 [Cucumis sativus] >XP_011655043.1 uncharacterized protein LOC101209878 [Cucumis sativus] >XP_011655044.1 uncharacterized protein LOC101209878 [Cucumis sativus] >XP_011655045.1 uncharacterized protein LOC101209878 [Cucumis sativus] >XP_011655046.1 uncharacterized protein LOC101209878 [Cucumis sativus] >XP_031742110.1 uncharacterized protein LOC101209878 [Cucumis sativus])

HSP 1 Score: 419 bits (1076), Expect = 5.62e-145
Identity = 215/281 (76.51%), Postives = 237/281 (84.34%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCNQ----PAEQVANPVAPITHADLT----QLEQRFNDTVTEV 60
           MT R+ A RG QGGR  G NQ    PAEQV NPVAP++ ADLT    +LEQ F DTVT+V
Sbjct: 1   MTARKVASRGGQGGREAGHNQVDEQPAEQVTNPVAPVSQADLTAMSTRLEQMFKDTVTKV 60

Query: 61  LARHQLAQAALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSV 120
           LA+HQLAQAA +QGQ A QDLP+QLS EAKHLRDFRIYDPQTFNG  EDPI+  LWLSSV
Sbjct: 61  LAQHQLAQAAPSQGQAAPQDLPNQLSAEAKHLRDFRIYDPQTFNGLSEDPINVMLWLSSV 120

Query: 121 ETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPS 180
           E IF +M+CPD+QKVQCAVFLLRERAAIWW SVERMLGGNVNQ TWDQFKESFYAKF P+
Sbjct: 121 ERIFHYMKCPDNQKVQCAVFLLRERAAIWWLSVERMLGGNVNQFTWDQFKESFYAKFFPA 180

Query: 181 SLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFV 240
           SLRD KRQEFI+LKQGQMT+EEYDYEFD+LSLFAPELVETEAARA+ FVWGL+ DL+GFV
Sbjct: 181 SLRDDKRQEFIDLKQGQMTLEEYDYEFDILSLFAPELVETEAARAQRFVWGLKNDLRGFV 240

Query: 241 RAFKPATQTEALYLALDLSVQKDDDLLKVSRKGPFLGQKRR 273
           RA KPATQTEAL +A+DLS  KDDD  KVSR GP  GQKR+
Sbjct: 241 RALKPATQTEALRIAMDLSAHKDDDPPKVSRNGPSSGQKRK 281

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BLAST of MELO.jh022740.1 vs. NCBI nr
Match: KAA0062785.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 324 bits (830), Expect = 1.29e-106
Identity = 167/291 (57.39%), Postives = 207/291 (71.13%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCN------QPAEQVANPVAPITHADLTQLEQRFNDTVTEVLA 60
           M PRR ARRG +GGRG G        QP  Q  +P AP+THADL  +EQRF D + ++  
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  RHQLAQAALAQGQT------------AQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDP 120
           + + A    A                A Q +PDQLS EAKHLRDFR Y+P TF+GSLEDP
Sbjct: 61  QQKPASPTPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120

Query: 121 ISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFK 180
              ++WLSS+ETIFR+M+CP+DQKVQCAVF+L +R   WW++ ERMLGG+V+QITW QFK
Sbjct: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180

Query: 181 ESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVW 240
           ESFYAKF  +SLRDAKRQEF+NL+QG MTVE+YD EFDMLS FAPE++ TEAARA  FV 
Sbjct: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240

Query: 241 GLRKDLQGFVRAFKPATQTEALYLALDLSVQKDDDLLKVSRKGPFLGQKRR 273
           GLR D+QG VRAF+ AT  +AL LA+DLS+Q+  +  K + +G   GQKR+
Sbjct: 241 GLRLDIQGLVRAFRLATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 291

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BLAST of MELO.jh022740.1 vs. NCBI nr
Match: KAA0036632.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 320 bits (820), Expect = 9.92e-106
Identity = 165/295 (55.93%), Postives = 207/295 (70.17%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCN------QPAEQVANPVAPITHADLTQLEQRFNDTVTEVLA 60
           M PRR ARRG +GGRG G        QP  Q  +P AP+THADL  +EQRF D + ++  
Sbjct: 1   MPPRRGARRGGRGGRGRGGGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  RHQLAQAALAQGQT----------------AQQDLPDQLSVEAKHLRDFRIYDPQTFNGS 120
           + + A    A                    A Q +PDQLS EAKHLRDFR Y+P TF+GS
Sbjct: 61  QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITW 180
           LEDP   ++WLSS+ETIFR+M+CP++QKVQCAVF+L +R   WW++ ERMLGG+V+QITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPENQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 DQFKESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAK 240
            QF ESFYAKF  +SLRDAKRQEF+NL+QG MTV++YD EFDMLS FAPE++ TEAARA 
Sbjct: 181 QQFNESFYAKFFSASLRDAKRQEFLNLEQGDMTVKQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 MFVWGLRKDLQGFVRAFKPATQTEALYLALDLSVQKDDDLLKVSRKGPFLGQKRR 273
            FV GLR D+QG VRAF+PAT  +AL LA+DLS+Q+  +  K + +G   GQKR+
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 295

[Close]

BLAST of MELO.jh022740.1 vs. NCBI nr
Match: KAA0065338.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 328 bits (842), Expect = 1.14e-105
Identity = 169/287 (58.89%), Postives = 208/287 (72.47%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCN------QPAEQVANPVAPITHADLTQLEQRFNDTVTEVLA 60
           M PRR ARRG +GGRG G        QP  Q   P AP+THADL  +EQRF D + ++  
Sbjct: 111 MPPRRDARRGGRGGRGRGAGRVQPEVQPVAQATYPAAPVTHADLVAMEQRFRDLIMQMRE 170

Query: 61  RHQLAQAALAQGQT--------AQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTK 120
           + Q A  A A            A Q +PDQLS EAKHLRDFR Y+P TF+GSL+DP   +
Sbjct: 171 QQQPAPPAPAPAPAPAPAPVPVAPQVVPDQLSAEAKHLRDFRKYNPTTFDGSLKDPTRAQ 230

Query: 121 LWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFY 180
           LWLSS++TIFR+M+CP+DQKVQCAVF+L +R   WW++ ERMLGG+V+QITW QFKESFY
Sbjct: 231 LWLSSLKTIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFKESFY 290

Query: 181 AKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRK 240
           AKF  +SLRDAKRQEF+NL+QG MTVE+YD EFDMLS FAPE++ TEAARA  FV GLR 
Sbjct: 291 AKFYSASLRDAKRQEFLNLEQGDMTVEQYDEEFDMLSRFAPEMIATEAARADKFVRGLRL 350

Query: 241 DLQGFVRAFKPATQTEALYLALDLSVQKDDDLLKVSRKGPFLGQKRR 273
           D+QG VRAF+P T  +AL LA+DLS+Q+  +  KV+ +G   GQKR+
Sbjct: 351 DIQGLVRAFRPTTHADALRLAVDLSLQERANSSKVAGRGSTSGQKRK 397

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BLAST of MELO.jh022740.1 vs. ExPASy TrEMBL
Match: A0A1S3C5M7 (uncharacterized protein LOC103496742 OS=Cucumis melo OX=3656 GN=LOC103496742 PE=4 SV=1)

HSP 1 Score: 566 bits (1459), Expect = 8.52e-204
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60
           MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ
Sbjct: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60

Query: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120
           AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR
Sbjct: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120

Query: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180
           CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ
Sbjct: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180

Query: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240
           EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ
Sbjct: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240

Query: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285
           TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET
Sbjct: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285

[Close]

BLAST of MELO.jh022740.1 vs. ExPASy TrEMBL
Match: A0A5D3BCD2 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00010 PE=4 SV=1)

HSP 1 Score: 566 bits (1459), Expect = 8.52e-204
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60
           MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ
Sbjct: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60

Query: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120
           AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR
Sbjct: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120

Query: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180
           CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ
Sbjct: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180

Query: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240
           EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ
Sbjct: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240

Query: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285
           TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET
Sbjct: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285

[Close]

BLAST of MELO.jh022740.1 vs. ExPASy TrEMBL
Match: E5GB72 (Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 566 bits (1459), Expect = 8.52e-204
Identity = 285/285 (100.00%), Postives = 285/285 (100.00%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60
           MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ
Sbjct: 1   MTPRRSARRGDQGGRGVGCNQPAEQVANPVAPITHADLTQLEQRFNDTVTEVLARHQLAQ 60

Query: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120
           AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR
Sbjct: 61  AALAQGQTAQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDPISTKLWLSSVETIFRFMR 120

Query: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180
           CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ
Sbjct: 121 CPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFKESFYAKFLPSSLRDAKRQ 180

Query: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240
           EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ
Sbjct: 181 EFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVWGLRKDLQGFVRAFKPATQ 240

Query: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285
           TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET
Sbjct: 241 TEALYLALDLSVQKDDDLLKVSRKGPFLGQKRRLSRSLLMFHRET 285

[Close]

BLAST of MELO.jh022740.1 vs. ExPASy TrEMBL
Match: A0A5A7VA59 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold26968G00010 PE=4 SV=1)

HSP 1 Score: 324 bits (830), Expect = 6.24e-107
Identity = 167/291 (57.39%), Postives = 207/291 (71.13%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCN------QPAEQVANPVAPITHADLTQLEQRFNDTVTEVLA 60
           M PRR ARRG +GGRG G        QP  Q  +P AP+THADL  +EQRF D + ++  
Sbjct: 1   MPPRRGARRGGRGGRGRGAGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  RHQLAQAALAQGQT------------AQQDLPDQLSVEAKHLRDFRIYDPQTFNGSLEDP 120
           + + A    A                A Q +PDQLS EAKHLRDFR Y+P TF+GSLEDP
Sbjct: 61  QQKPASPTPAPAPAPAPAPVPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGSLEDP 120

Query: 121 ISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITWDQFK 180
              ++WLSS+ETIFR+M+CP+DQKVQCAVF+L +R   WW++ ERMLGG+V+QITW QFK
Sbjct: 121 TRAQMWLSSLETIFRYMKCPEDQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITWQQFK 180

Query: 181 ESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAKMFVW 240
           ESFYAKF  +SLRDAKRQEF+NL+QG MTVE+YD EFDMLS FAPE++ TEAARA  FV 
Sbjct: 181 ESFYAKFFSASLRDAKRQEFLNLEQGDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVR 240

Query: 241 GLRKDLQGFVRAFKPATQTEALYLALDLSVQKDDDLLKVSRKGPFLGQKRR 273
           GLR D+QG VRAF+ AT  +AL LA+DLS+Q+  +  K + +G   GQKR+
Sbjct: 241 GLRLDIQGLVRAFRLATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 291

[Close]

BLAST of MELO.jh022740.1 vs. ExPASy TrEMBL
Match: A0A5A7SZN4 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold16262G00010 PE=4 SV=1)

HSP 1 Score: 320 bits (820), Expect = 4.80e-106
Identity = 165/295 (55.93%), Postives = 207/295 (70.17%), Query Frame = 0


Query: 1   MTPRRSARRGDQGGRGVGCN------QPAEQVANPVAPITHADLTQLEQRFNDTVTEVLA 60
           M PRR ARRG +GGRG G        QP  Q  +P AP+THADL  +EQRF D + ++  
Sbjct: 1   MPPRRGARRGGRGGRGRGGGRVQPEVQPVAQAPDPAAPVTHADLAAMEQRFRDLIMQMRE 60

Query: 61  RHQLAQAALAQGQT----------------AQQDLPDQLSVEAKHLRDFRIYDPQTFNGS 120
           + + A    A                    A Q +PDQLS EAKHLRDFR Y+P TF+GS
Sbjct: 61  QQKPASPTPASAPAPAPAPAPAPAPAPVPVAPQFVPDQLSAEAKHLRDFRKYNPTTFDGS 120

Query: 121 LEDPISTKLWLSSVETIFRFMRCPDDQKVQCAVFLLRERAAIWWQSVERMLGGNVNQITW 180
           LEDP   ++WLSS+ETIFR+M+CP++QKVQCAVF+L +R   WW++ ERMLGG+V+QITW
Sbjct: 121 LEDPTRAQMWLSSLETIFRYMKCPENQKVQCAVFMLTDRGTAWWETTERMLGGDVSQITW 180

Query: 181 DQFKESFYAKFLPSSLRDAKRQEFINLKQGQMTVEEYDYEFDMLSLFAPELVETEAARAK 240
            QF ESFYAKF  +SLRDAKRQEF+NL+QG MTV++YD EFDMLS FAPE++ TEAARA 
Sbjct: 181 QQFNESFYAKFFSASLRDAKRQEFLNLEQGDMTVKQYDAEFDMLSRFAPEMIATEAARAD 240

Query: 241 MFVWGLRKDLQGFVRAFKPATQTEALYLALDLSVQKDDDLLKVSRKGPFLGQKRR 273
            FV GLR D+QG VRAF+PAT  +AL LA+DLS+Q+  +  K + +G   GQKR+
Sbjct: 241 KFVRGLRLDIQGLVRAFRPATHADALRLAVDLSLQERANSSKTAGRGSTSGQKRK 295

The following BLAST results are available for this feature:

BLAST of MELO.jh022740.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456947.1	1.76e-203	100.00	PREDICTED: uncharacterized protein LOC103496742 [Cucumis melo] >XP_008456948.1 P...	[more]
XP_011655042.1	5.62e-145	76.51	uncharacterized protein LOC101209878 [Cucumis sativus] >XP_011655043.1 uncharact...	[more]
KAA0062785.1	1.29e-106	57.39	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0036632.1	9.92e-106	55.93	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0065338.1	1.14e-105	58.89	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of MELO.jh022740.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh022740.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C5M7	8.52e-204	100.00	uncharacterized protein LOC103496742 OS=Cucumis melo OX=3656 GN=LOC103496742 PE=...	[more]
A0A5D3BCD2	8.52e-204	100.00	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
E5GB72	8.52e-204	100.00	Ty3-gypsy retrotransposon protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=...	[more]
A0A5A7VA59	6.24e-107	57.39	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7SZN4	4.80e-106	55.93	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of MELO.jh022740.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 129..225 e-value: 3.2E-18 score: 65.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	PANTHER	PTHR34482:SF4	POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATED	coord: 107..228
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 107..228

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh022740.1.t1	MELO.jh022740.1.t1	mRNA