MELO.jh022558.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh022558.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionCACTA en-spm transposon protein
Locationchr10: 8654718 .. 8655209 (-)
RNA-Seq ExpressionMELO.jh022558.1
SyntenyMELO.jh022558.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATCACCCTTAGAGCAGAGAAGCCTATTTCCCCATATGCCATTCGATTCAGCCAGGTGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGCCTTAAGTGACGGACATTGGCAGAGAATATATTGAGGTCGTCAAGGGCGACCTCCAGGTAATTATGTCCACTACATATTTATGATTTCATTTGAAATATATCTAAGTTAACTAATCTAATGTGTTATTTTTGTAATGTGTAGCGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATTAAATGCTTACCACCTTCAAGGAGTTTCCGGATGACTGTTACAGATACTTTAAAAAGTACAGCGACCCTGAGGAGGCTCATGCTAACCCATCAAACATATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGAGCCGTGCATTCTAGGTATTTGTCATGCTTAATTATGATTTCAACTTT

mRNA sequence

ATGAAGATCACCCTTAGAGCAGAGAAGCCTATTTCCCCATATGCCATTCGATTCAGCCAGGTGATAGGCGTGTGCGTGCGAAAGACATTTCCCGTCCGCTGCCTTAAGTGACGGACATTGGCAGAGAATATATTGAGGTCGTCAAGGGCGACCTCCAGCGGTTTTTTGTGCTTGATTTCAATGATCAAGCAATGAATAGGTTTGTTGAGCATTAAATGCTTACCACCTTCAAGGAGTTTCCGGATGACTGTTACAGATACTTTAAAAAGTACAGCGACCCTGAGGAGGCTCATGCTAACCCATCAAACATATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGAGCCGTGCATTCTAGGTATTTGTCATGCTTAATTATGATTTCAACTTT

Coding sequence (CDS)

ATGCTTACCACCTTCAAGGAGTTTCCGGATGACTGTTACAGATACTTTAAAAAGTACAGCGACCCTGAGGAGGCTCATGCTAACCCATCAAACATATTGGTTGGACGTCATGAGGATTGGCACTTCCTCTGCGACCACTACATGAGCCGTGCATTCTAG

Protein sequence

MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF
Homology
[Close]
BLAST of MELO.jh022558.1 vs. NCBI nr
Match: KAA0050757.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (249), Expect = 1.26e-25
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 1  MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
          MLTTFKEF  DC+R+FKKYSDPEEA ANP N LVGR EDWHFLCDHY+SRAF
Sbjct: 28 MLTTFKEFQADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 79

[Close]
BLAST of MELO.jh022558.1 vs. NCBI nr
Match: KAA0034856.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ96668.1 NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 101 bits (251), Expect = 2.17e-25
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 1  MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
          ML TFKEF  DC+R+FKKYSDPEEA ANP NILVGR EDWHFLCDHYMSRAF
Sbjct: 1  MLNTFKEFWTDCHRHFKKYSDPEEARANPPNILVGRDEDWHFLCDHYMSRAF 52

[Close]
BLAST of MELO.jh022558.1 vs. NCBI nr
Match: TYK08658.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 97.4 bits (241), Expect = 4.13e-25
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1  MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
          MLTTFKEF  DC+R+FKKYSDPEEA ANP N LV R EDWHFLCDHY+SRAF
Sbjct: 17 MLTTFKEFQADCHRHFKKYSDPEEARANPPNALVRRDEDWHFLCDHYISRAF 68

[Close]
BLAST of MELO.jh022558.1 vs. NCBI nr
Match: KAA0040895.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 103 bits (257), Expect = 4.23e-25
Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 1   MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
           MLTTFKEF  DC+R+FKKYSDPEEA ANP N LVGRHEDWHFLCDHY+SRAF
Sbjct: 214 MLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRHEDWHFLCDHYISRAF 265

[Close]
BLAST of MELO.jh022558.1 vs. NCBI nr
Match: TYK11881.1 (CACTA en-spm transposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 100 bits (248), Expect = 9.21e-25
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 1   MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
           MLTTFKEF  DC+R+FKKYSDPEEA ANP N LVGR EDWHFLCDHY+SRAF
Sbjct: 102 MLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 153

[Close]
BLAST of MELO.jh022558.1 vs. ExPASy TrEMBL
Match: A0A5A7U8P0 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold404G00050 PE=4 SV=1)

HSP 1 Score: 100 bits (249), Expect = 6.11e-26
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 1  MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
          MLTTFKEF  DC+R+FKKYSDPEEA ANP N LVGR EDWHFLCDHY+SRAF
Sbjct: 28 MLTTFKEFQADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 79

[Close]
BLAST of MELO.jh022558.1 vs. ExPASy TrEMBL
Match: A0A5D3BEQ0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold549G00170 PE=4 SV=1)

HSP 1 Score: 101 bits (251), Expect = 1.05e-25
Identity = 44/52 (84.62%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 1  MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
          ML TFKEF  DC+R+FKKYSDPEEA ANP NILVGR EDWHFLCDHYMSRAF
Sbjct: 1  MLNTFKEFWTDCHRHFKKYSDPEEARANPPNILVGRDEDWHFLCDHYMSRAF 52

[Close]
BLAST of MELO.jh022558.1 vs. ExPASy TrEMBL
Match: A0A5D3CBU1 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold50037G00010 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.00e-25
Identity = 42/52 (80.77%), Postives = 45/52 (86.54%), Query Frame = 0 

Query: 1  MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
          MLTTFKEF  DC+R+FKKYSDPEEA ANP N LV R EDWHFLCDHY+SRAF
Sbjct: 17 MLTTFKEFQADCHRHFKKYSDPEEARANPPNALVRRDEDWHFLCDHYISRAF 68

[Close]
BLAST of MELO.jh022558.1 vs. ExPASy TrEMBL
Match: A0A5A7THM5 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold125G00040 PE=4 SV=1)

HSP 1 Score: 103 bits (257), Expect = 2.05e-25
Identity = 44/52 (84.62%), Postives = 47/52 (90.38%), Query Frame = 0 

Query: 1   MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
           MLTTFKEF  DC+R+FKKYSDPEEA ANP N LVGRHEDWHFLCDHY+SRAF
Sbjct: 214 MLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRHEDWHFLCDHYISRAF 265

[Close]
BLAST of MELO.jh022558.1 vs. ExPASy TrEMBL
Match: A0A5D3CJ98 (CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00320 PE=4 SV=1)

HSP 1 Score: 100 bits (248), Expect = 4.46e-25
Identity = 43/52 (82.69%), Postives = 46/52 (88.46%), Query Frame = 0 

Query: 1   MLTTFKEFPDDCYRYFKKYSDPEEAHANPSNILVGRHEDWHFLCDHYMSRAF 52
           MLTTFKEF  DC+R+FKKYSDPEEA ANP N LVGR EDWHFLCDHY+SRAF
Sbjct: 102 MLTTFKEFRADCHRHFKKYSDPEEARANPPNALVGRDEDWHFLCDHYISRAF 153

The following BLAST results are available for this feature:
BLAST of MELO.jh022558.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050757.11.26e-2582.69CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0034856.12.17e-2584.62NBS-LRR type resistance protein [Cucumis melo var. makuwa] >TYJ96668.1 NBS-LRR t... [more]
TYK08658.14.13e-2580.77CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
KAA0040895.14.23e-2584.62CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
TYK11881.19.21e-2582.69CACTA en-spm transposon protein [Cucumis melo var. makuwa][more]
BLAST of MELO.jh022558.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh022558.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7U8P06.11e-2682.69CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BEQ01.05e-2584.62NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5D3CBU12.00e-2580.77CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7THM52.05e-2584.62CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3CJ984.46e-2582.69CACTA en-spm transposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO.jh022558.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh022558.1.t1MELO.jh022558.1.t1mRNA