MELO.jh021146.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh021146.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr09: 22362419 .. 22363824 (+)
RNA-Seq ExpressionMELO.jh021146.1
SyntenyMELO.jh021146.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CAACCCCATCAACGGCTTCCCCACTCCTCTCACTACTCCGCCACAAACCGCCACCGGAAAATTCACCACCTCAATCGCCGCCATCAAAACCAGCATCTTCTTCACCATTCTCACAACCTCTTCATCTCTAGTAAAAATCCTCCCCCATTCCCCTCTCCCCGCCACCATCGCCGCCGCCCCCATCAATCCAACCACCACACTCCCCACCACCGATACCCCCGCCGACCACCTCGCCGCCAACCCACTGTTCCGACCCAACTCGTTCGACACACGCGCCGACGCACACGTGGCTAACGATAACATAACAGAGTAAAGCAAATAATCGAAGTTTAATACTATAGCTATGGTCCCTACGGCTTGTTTAGCATTGGGAAGACGGCCGGTGAGAAGTATCAGAATCTCGTAACACCACCATTCAAGACAGGTGGTTAAGCAACACGGACCTGAAAGCTTCAATAGGCGAACCCAATCTTGAACCGTTTGATCAAACCACCCCCCACCTTCTTCATTATTACTCATACTTTGTTTCAACCAAACGTAAATCGCTAATGAAATCATTGCTACAAAATCTGTTACCCAAATCGCTATGGAAACCCCAATTAATCCCTTGGATTTAGCAAGAAAAATGTTGATGGGTACATGAAGAGCCAAAGCCAGAGCAGAGGACAACATGGTCGGGAGCGTCTCTGTTTGTGAACTGAGATACGATTTCAATGGGCAGAGGAATGAAGTGATTAACAAATCAGGGAGAAGATAGAAAAGATAGGTTTTAGCGGCAATTGAAATGTCTTTTTGTTGACCGAAATGGATCAAGATTGTGTCGACGTTGAGCCAGAGGAAAGAAATTGGAAGTGTAGCGAGGAGTAAAAGGAAGATGGACATGAACAGAGTTTTGTGAAGGAGTTTGAAATTCTTGGCGCCGAAGGCTTGACCGCAAATGGGTTCCATGGCACAACAGAGACCATTCAAAACGGAAAAGCCGGTGACATTTGCGAAGGTGAAACCGAGTGTTCCGGCGGCTAATGGAAGATCGCCGAGACGGCCAAGGAAAGCAGTGGTAATGGCTATCTTTACAAACCATGTTAAGTTCATAGCGATGAGTGGAAGAGCGATGCCTCTTTGTAATTTCAGCTCGGAAAGAATGGAGTTGATGAAATCTTTTGAAACCCATTTCGTAATTCTTGGGCTTGATCCAGATTCCAAGGTTGAAGAAGATACAGTTACAGACATCGACCCCCCTTTTTTTTTTTTTTTTCTCTTTTTGAATTGGGGGAAGAGTTTTGTTCTTGGGTGGATTTTGTAACTTAATTTGTAAGGCCTAAGATGAAGATGAAGATGAAGATTTAGTTGACGTGATTGAGATACTCTTGATCGAACTTTAGTGAATTAAAAAGAAAAATGTGATT

mRNA sequence

CAACCCCATCAACGGCTTCCCCACTCCTCTCACTACTCCGCCACAAACCGCCACCGGAAAATTCACCACCTCAATCGCCGCCATCAAAACCAGCATCTTCTTCACCATTCTCACAACCTCTTCATCTCTAGTAAAAATCCTCCCCCATTCCCCTCTCCCCGCCACCATCGCCGCCGCCCCCATCAATCCAACCACCACACTCCCCACCACCGATACCCCCGCCGACCACCTCGCCGCCAACCCACTGTTCCGACCCAACTCGTTCGACACACGCGCCGACGCACACGTGGCTAACGATAACATAACAGAGTAAAGCAAATAATCGAAGTTTAATACTATAGCTATGGTCCCTACGGCTTGTTTAGCATTGGGAAGACGGCCGGTGAGAAGTATCAGAATCTCGTAACACCACCATTCAAGACAGGTGGTTAAGCAACACGGACCTGAAAGCTTCAATAGGCGAACCCAATCTTGAACCGTTTGATCAAACCACCCCCCACCTTCTTCATTATTACTCATACTTTGTTTCAACCAAACGTAAATCGCTAATGAAATCATTGCTACAAAATCTGTTACCCAAATCGCTATGGAAACCCCAATTAATCCCTTGGATTTAGCAAGAAAAATGTTGATGGGTACATGAAGAGCCAAAGCCAGAGCAGAGGACAACATGGTCGGGAGCGTCTCTGTTTGTGAACTGAGATACGATTTCAATGGGCAGAGGAATGAAGTGATTAACAAATCAGGGAGAAGATAGAAAAGATAGGTTTTAGCGGCAATTGAAATGTCTTTTTGTTGACCGAAATGGATCAAGATTGTGTCGACGTTGAGCCAGAGGAAAGAAATTGGAAGTGTAGCGAGGAGTAAAAGGAAGATGGACATGAACAGAGTTTTGTGAAGGAGTTTGAAATTCTTGGCGCCGAAGGCTTGACCGCAAATGGGTTCCATGGCACAACAGAGACCATTCAAAACGGAAAAGCCGGTGACATTTGCGAAGGTGAAACCGAGTGTTCCGGCGGCTAATGGAAGATCGCCGAGACGGCCAAGGAAAGCAGTGGTAATGGCTATCTTTACAAACCATGTTAAGTTCATAGCGATGAGTGGAAGAGCGATGCCTCTTTGTAATTTCAGCTCGGAAAGAATGGAGTTGATGAAATCTTTTGAAACCCATTTCGTAATTCTTGGGCTTGATCCAGATTCCAAGGTTGAAGAAGATACAGTTACAGACATCGACCCCCCTTTTTTTTTTTTTTTTCTCTTTTTGAATTGGGGGAAGAGTTTTGTTCTTGGGTGGATTTTGTAACTTAATTTGTAAGGCCTAAGATGAAGATGAAGATGAAGATTTAGTTGACGTGATTGAGATACTCTTGATCGAACTTTAGTGAATTAAAAAGAAAAATGTGATT

Coding sequence (CDS)

ATGGGTTCCATGGCACAACAGAGACCATTCAAAACGGAAAAGCCGGTGACATTTGCGAAGGTGAAACCGAGTGTTCCGGCGGCTAATGGAAGATCGCCGAGACGGCCAAGGAAAGCAGTGGTAATGGCTATCTTTACAAACCATGTTAAGTTCATAGCGATGAGTGGAAGAGCGATGCCTCTTTGTAATTTCAGCTCGGAAAGAATGGAGTTGATGAAATCTTTTGAAACCCATTTCGTAATTCTTGGGCTTGATCCAGATTCCAAGGTTGAAGAAGATACAGTTACAGACATCGACCCCCCTTTTTTTTTTTTTTTTCTCTTTTTGAATTGGGGGAAGAGTTTTGTTCTTGGGTGGATTTTGTAA

Protein sequence

MGSMAQQRPFKTEKPVTFAKVKPSVPAANGRSPRRPRKAVVMAIFTNHVKFIAMSGRAMPLCNFSSERMELMKSFETHFVILGLDPDSKVEEDTVTDIDPPFFFFFLFLNWGKSFVLGWIL
Homology
[Close]
BLAST of MELO.jh021146.1 vs. NCBI nr
Match: KAG5056878.1 (hypothetical protein JHK86_011874 [Glycine max])

HSP 1 Score: 63.5 bits (153), Expect = 1.39e-10
Identity = 33/49 (67.35%), Postives = 35/49 (71.43%), Query Frame = 0 

Query: 4  MAQQRPFKTEKPVTFAKVKPSVPAANGRSPRRPRKAVVMAIFTNHVKFI 52
          MA  RPFKTEKPVT AK+ PS P A   SPR PRKAVVMA+  N  KFI
Sbjct: 1  MAPLRPFKTEKPVTLAKLNPSAPPAKFSSPRWPRKAVVMAVLANLAKFI 49

[Close]
BLAST of MELO.jh021146.1 vs. NCBI nr
Match: CBI34814.3 (unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 54.7 bits (130), Expect = 2.93e-06
Identity = 28/53 (52.83%), Postives = 32/53 (60.38%), Query Frame = 0 

Query: 15  PVTFAKVKPSVPAANGRSPRRPRKAVVMAIFTNHVKFIAMSGRAMPLCNFSSE 67
           PVTFAKV PS P AN  SP  PR  VVM    +  KF+ M G  +PLC  SS+
Sbjct: 102 PVTFAKVNPSTPPANCSSPSWPRNTVVMTHLPSQAKFMTMRGTTIPLCFLSSD 154

The following BLAST results are available for this feature:
BLAST of MELO.jh021146.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG5056878.11.39e-1067.35hypothetical protein JHK86_011874 [Glycine max][more]
CBI34814.32.93e-0652.83unnamed protein product, partial [Vitis vinifera][more]
BLAST of MELO.jh021146.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh021146.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh021146.1 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh021146.1.t1MELO.jh021146.1.t1mRNA