MELO.jh019608.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh019608.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionGenome assembly, chromosome: II
Locationchr09: 967933 .. 969057 (+)
RNA-Seq ExpressionMELO.jh019608.1
SyntenyMELO.jh019608.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCAGATCCCAAAACGCAAAGAACCCATGAATGGCGTTCTCAAATTCCACCATTTTCACTTCTTTCCCCATTCTCTTCAACCCTTCGTAATACCTCCTCTGCCCATCTTGCAACAGATCCAATTCTCCCACCAAAACCAACGTCGCCGGAAACTTCATCACCTCCCTAACATCCCTTCCCTTCGGTCCAAACACGTTCGCCGCCGCGTGATCTCGATCTTCCCCCTCCGGCAAAAACGCCTTCCAAAACCAATCCGAAAGCCTCAGATTCAACGGTCGCTGATTACGCAACCGAATCTCCGACTCCGTTCTCTCCTCTCCGCCGAAAAACGGCTGCGACGCTATGAACCCAACCAATCTCACCTTCTTCAACGTGTACTCACTCGCTCTCACTGCCACGTGGTGCCCGAGATTCCCTCCGGCGCTTTCCCCCAAAATGAAGCAACGGCTTAGATCCGCCTTTGCCGGAAGGATTTCCTCCCCCACTTCGTCGATGAATTTCAAAGCGTCGAATCCATCGTCGTATTGACATGGGTACCGGAATTCCGGAGCGAGGCGGTAGTTGACGGAGATTACAACGGCGGGTAATTGTTTGGCGAATCGGTGAGCGGAAGTGTGGGAGAGAGCTGAATCGGCGTAAGAGAAAGCGAAGCCGCCACCGTGGAAATAGAAAATCAACGGCAGAGATTGAAGATTTGAATCTTCATCGTCAATAATGGGATTGAAGATTCGAACCCAGAGGTTGCGGGAAGTGTCGATGGTGAGATCGAAAGAGGAGACGCCGTCGATTGGTTTGGTAGAAGGGGGGATTTTCCAGTCGAGGGTTCCGGAGAGCCAACGGTTGACAGTGAAATCGGATCGACAACAAGCGTCGGTGATTATAGTACCGATTCGAAGCAACAAACGATGCTTCCATGGAAGTTTGGAGCTTGAAATTTCACAAGCAGAAATGGAAGAAGAAGACATTTTTTTTCTAATTCTTTTTTTGATTTTTTTGAGTAATATAATTGTTTCTAAAAAAAGGTACACGTGGAAAAGGAGTTGCCAAGTGGCAACTCTTTTATGACAACTCAGCAAATTTCTAGTAAATATACTTAAATAAAATGCTATAAATAATTTGGAAAAA

mRNA sequence

GGCAGATCCCAAAACGCAAAGAACCCATGAATGGCGTTCTCAAATTCCACCATTTTCACTTCTTTCCCCATTCTCTTCAACCCTTCGTAATACCTCCTCTGCCCATCTTGCAACAGATCCAATTCTCCCACCAAAACCAACGTCGCCGGAAACTTCATCACCTCCCTAACATCCCTTCCCTTCGGTCCAAACACGTTCGCCGCCGCGTGATCTCGATCTTCCCCCTCCGGCAAAAACGCCTTCCAAAACCAATCCGAAAGCCTCAGATTCAACGGTCGCTGATTACGCAACCGAATCTCCGACTCCGTTCTCTCCTCTCCGCCGAAAAACGGCTGCGACGCTATGAACCCAACCAATCTCACCTTCTTCAACGTGTACTCACTCGCTCTCACTGCCACGTGGTGCCCGAGATTCCCTCCGGCGCTTTCCCCCAAAATGAAGCAACGGCTTAGATCCGCCTTTGCCGGAAGGATTTCCTCCCCCACTTCGTCGATGAATTTCAAAGCGTCGAATCCATCGTCGTATTGACATGGGTACCGGAATTCCGGAGCGAGGCGGTAGTTGACGGAGATTACAACGGCGGGTAATTGTTTGGCGAATCGGTGAGCGGAAGTGTGGGAGAGAGCTGAATCGGCGTAAGAGAAAGCGAAGCCGCCACCGTGGAAATAGAAAATCAACGGCAGAGATTGAAGATTTGAATCTTCATCGTCAATAATGGGATTGAAGATTCGAACCCAGAGGTTGCGGGAAGTGTCGATGGTGAGATCGAAAGAGGAGACGCCGTCGATTGGTTTGGTAGAAGGGGGGATTTTCCAGTCGAGGGTTCCGGAGAGCCAACGGTTGACAGTGAAATCGGATCGACAACAAGCGTCGGTGATTATAGTACCGATTCGAAGCAACAAACGATGCTTCCATGGAAGTTTGGAGCTTGAAATTTCACAAGCAGAAATGGAAGAAGAAGACATTTTTTTTCTAATTCTTTTTTTGATTTTTTTGAGTAATATAATTGTTTCTAAAAAAAGGTACACGTGGAAAAGGAGTTGCCAAGTGGCAACTCTTTTATGACAACTCAGCAAATTTCTAGTAAATATACTTAAATAAAATGCTATAAATAATTTGGAAAAA

Coding sequence (CDS)

ATGAATGGCGTTCTCAAATTCCACCATTTTCACTTCTTTCCCCATTCTCTTCAACCCTTCGTAATACCTCCTCTGCCCATCTTGCAACAGATCCAATTCTCCCACCAAAACCAACGTCGCCGGAAACTTCATCACCTCCCTAACATCCCTTCCCTTCGGTCCAAACACGTTCGCCGCCGCGTGATCTCGATCTTCCCCCTCCGGCAAAAACGCCTTCCAAAACCAATCCGAAAGCCTCAGATTCAACGGTCGCTGATTACGCAACCGAATCTCCGACTCCGTTCTCTCCTCTCCGCCGAAAAACGGCTGCGACGCTATGAACCCAACCAATCTCACCTTCTTCAACGTGTACTCACTCGCTCTCACTGCCACGTGGTGCCCGAGATTCCCTCCGGCGCTTTCCCCCAAAATGAAGCAACGGCTTAG

Protein sequence

MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRRVISIFPLRQKRLPKPIRKPQIQRSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQRVLTRSHCHVVPEIPSGAFPQNEATA
Homology
BLAST of MELO.jh019608.1 vs. NCBI nr
Match: KAF7014491.1 (hypothetical protein CFC21_028478 [Triticum aestivum] >SPT16701.1 unnamed protein product [Triticum aestivum])

HSP 1 Score: 84.7 bits (208), Expect = 4.32e-16
Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 0

Query: 1   MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRR 60
           M+GV K H  H  P  LQ   +PPLP+LQ+++ S+ + RRR+L     + +  + H+RRR
Sbjct: 58  MDGVRKLHQLHRLPLPLQHGGVPPLPVLQRVEPSNHHHRRRELLRQLGLRTRLTGHMRRR 117

Query: 61  VISIFPLRQKRLPKPIRKPQIQ-RSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQRVLT 120
           V+ I PLRQ+RLP PIR   +  R    QP L  R+LL+AE RL++ +  ++  + R  +
Sbjct: 118 VVPIGPLRQERLPGPIRAAHVHHRPHALQPQLCFRALLAAEVRLQQDDAGEADRVIRSNS 177

Query: 121 R----SHCHVVPEIPSGAFPQNEA 139
                S  HVV ++ +GA P  EA
Sbjct: 178 GRGGPSVGHVVSDVAAGAVPGEEA 201

BLAST of MELO.jh019608.1 vs. NCBI nr
Match: KAE8817436.1 (hypothetical protein D1007_04857 [Hordeum vulgare])

HSP 1 Score: 68.2 bits (165), Expect = 3.38e-10
Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 0

Query: 1   MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRR 60
           ++ V + HH H  P   Q   +PPLP+LQ+++ + Q+ RRR+   L  +  L   HVRR 
Sbjct: 52  VDTVRELHHLHGLPLPAQHVGVPPLPVLQRVEPADQHHRRRE--RLGQLGVLVG-HVRRG 111

Query: 61  VISIFPLRQKRLPKPIRKPQ-IQRSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQRVLT 120
           V++   LRQ+R P  +R P+   R    QP LRLR LL+AE RL   E   +H       
Sbjct: 112 VVAAGALRQERPPPEVRPPEGHDRRHAVQPQLRLRPLLAAEVRLHGQEAGDAHGAGGGRG 171

Query: 121 RSHC--HVVPEIPSGAFPQNEA 139
           RS     VV  + +GA P  EA
Sbjct: 172 RSPAVGRVVDYVAAGALPGEEA 190

BLAST of MELO.jh019608.1 vs. NCBI nr
Match: KAB8106572.1 (hypothetical protein EE612_040966, partial [Oryza sativa] >BAT02881.1 Os07g0643500, partial [Oryza sativa Japonica Group])

HSP 1 Score: 60.1 bits (144), Expect = 2.26e-07
Identity = 51/136 (37.50%), Postives = 73/136 (53.68%), Query Frame = 0

Query: 8   HHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRRVISIFPL 67
           HH H  P   Q   +PPLP+LQ++  S  + RRR+L  L  +  L    VRRRV+++  L
Sbjct: 33  HHLHRLPIPPQHPGVPPLPVLQRVVPSDHHHRRREL--LRQLGVLAG-DVRRRVVAVGAL 92

Query: 68  RQKRLPKPIRKPQIQ-RSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQRVLTR---SHC 127
           RQ+R P P+R      R    QP LRLR LL+AE+RL++ +  ++    R       S  
Sbjct: 93  RQERPPAPVRARHAHHRPHAVQPQLRLRPLLAAEERLQQDDAGEADAAARGGGGGGPSVR 152

Query: 128 HVVPEIPSGAFPQNEA 139
            VV ++ +GA    EA
Sbjct: 153 DVVGDVAAGAVADEEA 165

BLAST of MELO.jh019608.1 vs. NCBI nr
Match: CAB4309153.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 50.8 bits (120), Expect = 2.07e-04
Identity = 43/139 (30.94%), Postives = 63/139 (45.32%), Query Frame = 0

Query: 1   MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRR 60
           M  +   +   FFP  LQP V+ PLP+LQQI    +           +  S  +      
Sbjct: 1   MKRIWVLNQVSFFPRLLQPLVVSPLPVLQQINPPTKTIVAGNFTPKTSFDSGPNTFAAAW 60

Query: 61  VISIFPLRQKRLPKPIRKPQIQRSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQ-RVLT 120
            +S  PLRQK LP P+  PQ +   + +P LR       +KRL RY+    HL +  ++ 
Sbjct: 61  SLS-DPLRQKCLPVPVSLPQRKHQTLRKPCLRFSPFFPTKKRLYRYKSYNPHLAKLMMIA 120

Query: 121 RSHCHVVPEIPSGAFPQNE 138
           R   HVV ++ + A    E
Sbjct: 121 RLDGHVVGQVATCAVSGEE 138

BLAST of MELO.jh019608.1 vs. ExPASy TrEMBL
Match: A0A2X0SL01 (Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCUS1302 PE=4 SV=1)

HSP 1 Score: 84.7 bits (208), Expect = 2.09e-16
Identity = 57/144 (39.58%), Postives = 85/144 (59.03%), Query Frame = 0

Query: 1   MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRR 60
           M+GV K H  H  P  LQ   +PPLP+LQ+++ S+ + RRR+L     + +  + H+RRR
Sbjct: 58  MDGVRKLHQLHRLPLPLQHGGVPPLPVLQRVEPSNHHHRRRELLRQLGLRTRLTGHMRRR 117

Query: 61  VISIFPLRQKRLPKPIRKPQIQ-RSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQRVLT 120
           V+ I PLRQ+RLP PIR   +  R    QP L  R+LL+AE RL++ +  ++  + R  +
Sbjct: 118 VVPIGPLRQERLPGPIRAAHVHHRPHALQPQLCFRALLAAEVRLQQDDAGEADRVIRSNS 177

Query: 121 R----SHCHVVPEIPSGAFPQNEA 139
                S  HVV ++ +GA P  EA
Sbjct: 178 GRGGPSVGHVVSDVAAGAVPGEEA 201

BLAST of MELO.jh019608.1 vs. ExPASy TrEMBL
Match: A0A7N0ZYB5 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 4.93e-14
Identity = 53/129 (41.09%), Postives = 71/129 (55.04%), Query Frame = 0

Query: 11  HFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRRVISIFPLRQK 70
           H  P  LQP  IP +P+LQ+I  +  +QRRRKLH    I  +R  HVRR V+ +   RQ+
Sbjct: 46  HLLPTLLQPLTIPLVPVLQRIIPAANHQRRRKLH-ARQIHPIRPHHVRRPVVPVSLFRQE 105

Query: 71  RLPKPIRKPQIQRSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQR-VLTRSHCHVVPEI 130
            LP  +  P IQ   + QP LRLR L  A +R +  +P  S  L+  V  R   HVV ++
Sbjct: 106 GLPHFVGPPHIQHQRLLQPQLRLRPLHPAVERHQLDQPYHSEALELFVSARFDRHVVRDV 165

Query: 131 PSGAFPQNE 138
           PS A  + E
Sbjct: 166 PSRAVSREE 173

BLAST of MELO.jh019608.1 vs. ExPASy TrEMBL
Match: A0A3B6C1Q7 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.10e-11
Identity = 55/142 (38.73%), Postives = 77/142 (54.23%), Query Frame = 0

Query: 1   MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRR 60
           ++ V + HH H  P   Q   +PPLP+LQ+++ + Q+ RRR+   L  +  L   HVRRR
Sbjct: 78  VDAVRELHHLHGLPLPPQHVGVPPLPVLQRVEPADQHHRRRE--RLGQLGVLVG-HVRRR 137

Query: 61  VISIFPLRQKRLPKPIRKPQ-IQRSLITQPNLRLRSLLSAEKRLRRYEPNQSHLLQRVLT 120
           V++   LRQ+R P  +R P    R    QP LRLR LL+AE RL   E  ++H +     
Sbjct: 138 VVAAGALRQERPPPEVRPPDGHDRHHAVQPQLRLRPLLAAEVRLHGQEAGEAHGVWGGRG 197

Query: 121 RSHC--HVVPEIPSGAFPQNEA 139
           RS     VV  + +GA P  EA
Sbjct: 198 RSPAVGRVVDYVAAGALPGEEA 216

BLAST of MELO.jh019608.1 vs. ExPASy TrEMBL
Match: A0A0E0I4T4 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 7.77e-09
Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = 0

Query: 1   MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRR 60
           M+GV   HH H  P   Q   +P LP L+Q++ +  + RRR+   L  + +L + H RRR
Sbjct: 26  MDGVRVLHHPHRLPLLAQRRHVPRLPSLEQVEPADHHHRRRE--RLRQLDALAAAHARRR 85

Query: 61  VISIFPLRQKRLPKPIRKPQIQRSL-ITQPNLRLRSLLSAEKRLRRY---EPNQSHLLQR 120
           V+    LRQ+  P+ +R  Q QR   + +P+L LR LL+AE+   ++   EP +    +R
Sbjct: 86  VVPGGALRQELPPEVVRPRQRQREARLVEPHLLLRPLLAAEEGRYQHGAGEPERRGRGRR 145

Query: 121 VLTRSHCHVVPEIPSGAFPQNEATA 141
             + +  HVV ++P+ A P  +A A
Sbjct: 146 RRSPALRHVVRDVPARADPAGDAAA 168

BLAST of MELO.jh019608.1 vs. ExPASy TrEMBL
Match: A0A0E0I4T5 (Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 9.47e-09
Identity = 50/145 (34.48%), Postives = 80/145 (55.17%), Query Frame = 0

Query: 1   MNGVLKFHHFHFFPHSLQPFVIPPLPILQQIQFSHQNQRRRKLHHLPNIPSLRSKHVRRR 60
           M+GV   HH H  P   Q   +P LP L+Q++ +  + RRR+   L  + +L + H RRR
Sbjct: 26  MDGVRVLHHPHRLPLLAQRRHVPRLPSLEQVEPADHHHRRRE--RLRQLDALAAAHARRR 85

Query: 61  VISIFPLRQKRLPKPIRKPQIQRSL-ITQPNLRLRSLLSAEKRLRRY---EPNQSHLLQR 120
           V+    LRQ+  P+ +R  Q QR   + +P+L LR LL+AE+   ++   EP +    +R
Sbjct: 86  VVPGGALRQELPPEVVRPRQRQREARLVEPHLLLRPLLAAEEGRYQHGAGEPERRGRGRR 145

Query: 121 VLTRSHCHVVPEIPSGAFPQNEATA 141
             + +  HVV ++P+ A P  +A A
Sbjct: 146 RRSPALRHVVRDVPARADPAGDAAA 168

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF7014491.14.32e-1639.58hypothetical protein CFC21_028478 [Triticum aestivum] >SPT16701.1 unnamed protei... [more]
KAE8817436.13.38e-1038.03hypothetical protein D1007_04857 [Hordeum vulgare][more]
KAB8106572.12.26e-0737.50hypothetical protein EE612_040966, partial [Oryza sativa] >BAT02881.1 Os07g06435... [more]
CAB4309153.12.07e-0430.94unnamed protein product [Prunus armeniaca][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2X0SL012.09e-1639.58Genome assembly, chromosome: II OS=Triticum aestivum OX=4565 GN=CAMPLR22A2D_LOCU... [more]
A0A7N0ZYB54.93e-1441.09Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1[more]
A0A3B6C1Q71.10e-1138.73Uncharacterized protein OS=Triticum aestivum OX=4565 PE=4 SV=1[more]
A0A0E0I4T47.77e-0934.48Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1[more]
A0A0E0I4T59.47e-0934.48Uncharacterized protein OS=Oryza nivara OX=4536 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh019608.1.t1MELO.jh019608.1.t1mRNA