MELO.jh019159.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh019159.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 30267955 .. 30268824 (-)
RNA-Seq ExpressionMELO.jh019159.1
SyntenyMELO.jh019159.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAGTTGAGATTCCAAAACAGAGTATTCAGATACAAATTCCAGTCCTTTTTCACACCGTTCTCGCCAGAGCTAAACCACCGGCGAGGCCGAATCTTCGGCATGGCCATCAAGGTCATTAAAATGAAGGGTAACAACGAGAAGAAAGCCAAAACAATGGCGACATATCCAACGATTGTCAACCCGACGTAGTTGAGCAGTGAGAGGAGTATCGTTGAAATGAAGATGGAAATTCGACGAGGCCAACCAGATTCCAAGGCCGGGAATATTTTCTCAACGTAGCTGATGAAGAACGCCGGGAAGGCAGTAATGTTCATGATTCCGCTAAAGATCTTCCAAGTGCCCATGAGGGAGCCACAAAAGGGTCCAAAGGCTCGCTCCGCCCATATTACAAAACCCCCATTACCGGGAAAGGTGGTGGCGAGTTCCGCCGTGATCAGTGCCTCTGGGACACTCCATAAGAATGGAAAGACAATGAAGCCAATGATTGCGAACAGCGATCCGGCAGCTTGAACCGCTGGCTCTTCGCCATAAGGACCTCCGGCAACTTGGAAGTAAATGAGGAATACAAGAGGCAGCAGAGTTAGCTTCTTTCGAGTGGTGACCGCTGCGGTGGTTGCATCCGTGATTGATGGGTTTGAGGCAGCAGATTGGATTTGTAAAGCTTGTTTGTTGTCATTGCTGAACTCTTGGAGATTCATGTTGATTATTTCAGCTGTAACATAGAAATTCTAGTCAGAAAATATATATAGTCAGTAGAATTGAATAGTTGAAACATCGTAAAAGGAGCGATAGAAGTCTATTATCATATATTTTACTATATTTGTAATTGTTTTAAATTGTTTCTATATACTTAGTTATTATTTCTAAAA

mRNA sequence

AAAGTTGAGATTCCAAAACAGAGTATTCAGATACAAATTCCAGTCCTTTTTCACACCGTTCTCGCCAGAGCTAAACCACCGGCGAGGCCGAATCTTCGGCATGGCCATCAAGGTCATTAAAATGAAGGGTAACAACGAGAAGAAAGCCAAAACAATGGCGACATATCCAACGATTGTCAACCCGACGTAGTTGAGCAGTGAGAGGAGTATCGTTGAAATGAAGATGGAAATTCGACGAGGCCAACCAGATTCCAAGGCCGGGAATATTTTCTCAACGTAGCTGATGAAGAACGCCGGGAAGGCAGTAATGTTCATGATTCCGCTAAAGATCTTCCAAGTGCCCATGAGGGAGCCACAAAAGGGTCCAAAGGCTCGCTCCGCCCATATTACAAAACCCCCATTACCGGGAAAGGTGGTGGCGAGTTCCGCCGTGATCAGTGCCTCTGGGACACTCCATAAGAATGGAAAGACAATGAAGCCAATGATTGCGAACAGCGATCCGGCAGCTTGAACCGCTGGCTCTTCGCCATAAGGACCTCCGGCAACTTGGAAGTAAATGAGGAATACAAGAGGCAGCAGAGTTAGCTTCTTTCGAGTGGTGACCGCTGCGGTGGTTGCATCCGTGATTGATGGGTTTGAGGCAGCAGATTGGATTTGTAAAGCTTGTTTGTTGTCATTGCTGAACTCTTGGAGATTCATGTTGATTATTTCAGCTGTAACATAGAAATTCTAGTCAGAAAATATATATAGTCAGTAGAATTGAATAGTTGAAACATCGTAAAAGGAGCGATAGAAGTCTATTATCATATATTTTACTATATTTGTAATTGTTTTAAATTGTTTCTATATACTTAGTTATTATTTCTAAAA

Coding sequence (CDS)

ATGAAGAACGCCGGGAAGGCAGTAATGTTCATGATTCCGCTAAAGATCTTCCAAGTGCCCATGAGGGAGCCACAAAAGGGTCCAAAGGCTCGCTCCGCCCATATTACAAAACCCCCATTACCGGGAAAGGTGGTGGCGAGTTCCGCCGTGATCAGTGCCTCTGGGACACTCCATAAGAATGGAAAGACAATGAAGCCAATGATTGCGAACAGCGATCCGGCAGCTTGA

Protein sequence

MKNAGKAVMFMIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMIANSDPAA
Homology
BLAST of MELO.jh019159.1 vs. NCBI nr
Match: KCW87084.1 (hypothetical protein EUGRSUZ_B03618 [Eucalyptus grandis])

HSP 1 Score: 99.8 bits (247), Expect = 1.93e-25
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0

Query: 1  MKNAGKAVMFMIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKN 60
          M+  GKA M M PL+ FQVPMREP+KGPKARSA +TKPPLPG  V SSAV+ ASGTLH  
Sbjct: 1  MQRTGKAAMLMTPLRNFQVPMREPKKGPKARSAQMTKPPLPGNAVESSAVMRASGTLHMK 60

Query: 61 GKTMKPMIANSDPAA 75
          GK  KP  A+  PAA
Sbjct: 61 GKMEKPRRASKGPAA 75

BLAST of MELO.jh019159.1 vs. NCBI nr
Match: GFD51465.1 (hypothetical protein [Tanacetum cinerariifolium])

HSP 1 Score: 76.6 bits (187), Expect = 2.66e-16
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 9  MFMIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMI 68
          MF+ P++ F  P+++PQKGP A  A +T PP PGKVV SSAV  ASG  H NG  +KP I
Sbjct: 1  MFITPVRNFHEPIKDPQKGPNALWAQMTNPPFPGKVVESSAVTRASGIAHINGNIVKPKI 60

Query: 69 ANSDPAA 75
          A S PAA
Sbjct: 61 ARSGPAA 67

BLAST of MELO.jh019159.1 vs. NCBI nr
Match: ABG22080.1 (hypothetical protein LOC_Os12g41634 [Oryza sativa Japonica Group])

HSP 1 Score: 61.2 bits (147), Expect = 2.89e-10
Identity = 32/55 (58.18%), Postives = 35/55 (63.64%), Query Frame = 0

Query: 20 PMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMIANSDPA 74
          PM +P+KGP ARSA  T PP PG  V SSAV+S SGT    GK  K   ANS PA
Sbjct: 8  PMSDPEKGPNARSAQTTNPPFPGIAVESSAVMSDSGTAQMTGKMRKLSSANSRPA 62

BLAST of MELO.jh019159.1 vs. NCBI nr
Match: ONK73361.1 (uncharacterized protein A4U43_C04F30430 [Asparagus officinalis])

HSP 1 Score: 62.8 bits (151), Expect = 2.86e-09
Identity = 36/65 (55.38%), Postives = 38/65 (58.46%), Query Frame = 0

Query: 11 MIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMIAN 70
          M P + FQV MREP KGPKAR A  TKPPLP +  ASS VI A G     GK  KP I  
Sbjct: 1  MTPERNFQVAMREPGKGPKARWAQRTKPPLPWRAAASSTVIRALGMDQTKGKRRKPRIER 60

Query: 71 SDPAA 75
             AA
Sbjct: 61 RGAAA 65

BLAST of MELO.jh019159.1 vs. ExPASy TrEMBL
Match: A0A059D9C1 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03618 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 9.35e-26
Identity = 50/75 (66.67%), Postives = 56/75 (74.67%), Query Frame = 0

Query: 1  MKNAGKAVMFMIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKN 60
          M+  GKA M M PL+ FQVPMREP+KGPKARSA +TKPPLPG  V SSAV+ ASGTLH  
Sbjct: 1  MQRTGKAAMLMTPLRNFQVPMREPKKGPKARSAQMTKPPLPGNAVESSAVMRASGTLHMK 60

Query: 61 GKTMKPMIANSDPAA 75
          GK  KP  A+  PAA
Sbjct: 61 GKMEKPRRASKGPAA 75

BLAST of MELO.jh019159.1 vs. ExPASy TrEMBL
Match: A0A0A9E3F8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 1.49e-17
Identity = 41/65 (63.08%), Postives = 42/65 (64.62%), Query Frame = 0

Query: 11 MIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMIAN 70
          M  L+ F VP  EP  GPKARSAH TKPPLPG   ASSAV S SGT H  GKT KP    
Sbjct: 1  MTQLRYFHVPRSEPASGPKARSAHRTKPPLPGSAAASSAVTSDSGTPHAKGKTRKPRSVK 60

Query: 71 SDPAA 75
          S PAA
Sbjct: 61 SGPAA 65

BLAST of MELO.jh019159.1 vs. ExPASy TrEMBL
Match: A0A699WV44 (Uncharacterized protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_923434 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.29e-16
Identity = 38/67 (56.72%), Postives = 46/67 (68.66%), Query Frame = 0

Query: 9  MFMIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMI 68
          MF+ P++ F  P+++PQKGP A  A +T PP PGKVV SSAV  ASG  H NG  +KP I
Sbjct: 1  MFITPVRNFHEPIKDPQKGPNALWAQMTNPPFPGKVVESSAVTRASGIAHINGNIVKPKI 60

Query: 69 ANSDPAA 75
          A S PAA
Sbjct: 61 ARSGPAA 67

BLAST of MELO.jh019159.1 vs. ExPASy TrEMBL
Match: H2KX63 (Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g41634 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.40e-10
Identity = 32/55 (58.18%), Postives = 35/55 (63.64%), Query Frame = 0

Query: 20 PMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMIANSDPA 74
          PM +P+KGP ARSA  T PP PG  V SSAV+S SGT    GK  K   ANS PA
Sbjct: 8  PMSDPEKGPNARSAQTTNPPFPGIAVESSAVMSDSGTAQMTGKMRKLSSANSRPA 62

BLAST of MELO.jh019159.1 vs. ExPASy TrEMBL
Match: A0A5P1F9P4 (Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F30430 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 1.38e-09
Identity = 36/65 (55.38%), Postives = 38/65 (58.46%), Query Frame = 0

Query: 11 MIPLKIFQVPMREPQKGPKARSAHITKPPLPGKVVASSAVISASGTLHKNGKTMKPMIAN 70
          M P + FQV MREP KGPKAR A  TKPPLP +  ASS VI A G     GK  KP I  
Sbjct: 1  MTPERNFQVAMREPGKGPKARWAQRTKPPLPWRAAASSTVIRALGMDQTKGKRRKPRIER 60

Query: 71 SDPAA 75
             AA
Sbjct: 61 RGAAA 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KCW87084.11.93e-2566.67hypothetical protein EUGRSUZ_B03618 [Eucalyptus grandis][more]
GFD51465.12.66e-1656.72hypothetical protein [Tanacetum cinerariifolium][more]
ABG22080.12.89e-1058.18hypothetical protein LOC_Os12g41634 [Oryza sativa Japonica Group][more]
ONK73361.12.86e-0955.38uncharacterized protein A4U43_C04F30430 [Asparagus officinalis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A059D9C19.35e-2666.67Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_B03618 PE=4 SV... [more]
A0A0A9E3F81.49e-1763.08Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A699WV441.29e-1656.72Uncharacterized protein OS=Tanacetum cinerariifolium OX=118510 GN=Tci_923434 PE=... [more]
H2KX631.40e-1058.18Uncharacterized protein OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os12g416... [more]
A0A5P1F9P41.38e-0955.38Uncharacterized protein OS=Asparagus officinalis OX=4686 GN=A4U43_C04F30430 PE=4... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh019159.1.t1MELO.jh019159.1.t1mRNA