MELO.jh018822.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018822.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionSerine/threonine-protein phosphatase 7 long form-like protein
Locationchr08: 24091495 .. 24091836 (-)
RNA-Seq ExpressionMELO.jh018822.1
SyntenyMELO.jh018822.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GAAGAAGAGAATGGAAGGATCTCTTCTGAGATATTTACACAGATAGATTGGGACATTAGAAATTTTGTTTGTGAACAAGGGACTACTTTGGCAAATAGGGATGAATCTGTAGACACATCATGTTTAATTCAGAAGGGAATGTTATTTGACTGCAAGAAAAATCTTCAATTAGCTGTAAAAAAGTACTGTGTGACCCAACATTACGAAATTGTTGTAGTCGAATCGAACTAGAATATTTGGTCTGTTCGATACAAACAGTGGAGTAACGGTTGCAACTGGAGGTTACGTGGAAGTACGCATAAAAGCCACGAATTGTTTGAAATCAGTCAACTGGAAGGAGAG

mRNA sequence

GAAGAAGAGAATGGAAGGATCTCTTCTGAGATATTTACACAGATAGATTGGGACATTAGAAATTTTGTTTGTGAACAAGGGACTACTTTGGCAAATAGGGATGAATCTGTAGACACATCATGTTTAATTCAGAAGGGAATGTTATTTGACTGCAAGAAAAATCTTCAATTAGCTGTAAAAAAGTACTGTGTGACCCAACATTACGAAATTGTTGTAGTCGAATCGAACTAGAATATTTGGTCTGTTCGATACAAACAGTGGAGTAACGGTTGCAACTGGAGGTTACGTGGAAGTACGCATAAAAGCCACGAATTGTTTGAAATCAGTCAACTGGAAGGAGAG

Coding sequence (CDS)

ATGTTATTTGACTGCAAGAAAAATCTTCAATTAGCTGTAAAAAAGTACTGTGTGACCCAACATTACGAAATTGTTGTAGTCGAATCGAACTAG

Protein sequence

MLFDCKKNLQLAVKKYCVTQHYEIVVVESN
Homology
[Close]
BLAST of MELO.jh018822.1 vs. NCBI nr
Match: TYK05643.1 (uncharacterized protein E5676_scaffold98G001050 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 4.86e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1  MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
          MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 1  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 30

[Close]
BLAST of MELO.jh018822.1 vs. NCBI nr
Match: KAA0044308.1 (uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 7.57e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
           MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 82  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 111

[Close]
BLAST of MELO.jh018822.1 vs. NCBI nr
Match: TYK02543.1 (uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 7.57e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
           MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 82  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 111

[Close]
BLAST of MELO.jh018822.1 vs. NCBI nr
Match: KAA0054037.1 (uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 62.0 bits (149), Expect = 7.59e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
           MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 82  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 111

[Close]
BLAST of MELO.jh018822.1 vs. NCBI nr
Match: XP_008451648.1 (PREDICTED: uncharacterized protein LOC103492881 [Cucumis melo])

HSP 1 Score: 62.0 bits (149), Expect = 7.63e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1  MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
          MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 46 MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 75

[Close]
BLAST of MELO.jh018822.1 vs. ExPASy TrEMBL
Match: A0A5D3C124 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G001050 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.35e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1  MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
          MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 1  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 30

[Close]
BLAST of MELO.jh018822.1 vs. ExPASy TrEMBL
Match: A0A5D3BS92 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00230 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.66e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
           MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 82  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 111

[Close]
BLAST of MELO.jh018822.1 vs. ExPASy TrEMBL
Match: A0A5A7TN56 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00290 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.66e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
           MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 82  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 111

[Close]
BLAST of MELO.jh018822.1 vs. ExPASy TrEMBL
Match: A0A5A7UHL3 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G001000 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.67e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1   MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
           MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 82  MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 111

[Close]
BLAST of MELO.jh018822.1 vs. ExPASy TrEMBL
Match: A0A1S3BS22 (uncharacterized protein LOC103492881 OS=Cucumis melo OX=3656 GN=LOC103492881 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.69e-10
Identity = 28/30 (93.33%), Postives = 30/30 (100.00%), Query Frame = 0 

Query: 1  MLFDCKKNLQLAVKKYCVTQHYEIVVVESN 30
          MLFDCK++LQLAVKKYCVTQHYEIVVVESN
Sbjct: 46 MLFDCKEDLQLAVKKYCVTQHYEIVVVESN 75

The following BLAST results are available for this feature:
BLAST of MELO.jh018822.1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK05643.14.86e-1093.33uncharacterized protein E5676_scaffold98G001050 [Cucumis melo var. makuwa][more]
KAA0044308.17.57e-1093.33uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa][more]
TYK02543.17.57e-1093.33uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa][more]
KAA0054037.17.59e-1093.33uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa][more]
XP_008451648.17.63e-1093.33PREDICTED: uncharacterized protein LOC103492881 [Cucumis melo][more]
BLAST of MELO.jh018822.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh018822.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3C1242.35e-1093.33Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BS923.66e-1093.33SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
A0A5A7TN563.66e-1093.33SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A5A7UHL33.67e-1093.33SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6... [more]
A0A1S3BS223.69e-1093.33uncharacterized protein LOC103492881 OS=Cucumis melo OX=3656 GN=LOC103492881 PE=... [more]
BLAST of MELO.jh018822.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh018822.1.t1MELO.jh018822.1.t1mRNA