MELO.jh018749.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018749.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 22235438 .. 22236028 (+)
RNA-Seq ExpressionMELO.jh018749.1
SyntenyMELO.jh018749.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTAGTGTTTTGAATTATTTGAATTGTTATTCCTAATTATATTTTCAATGACTTCAAGGTGTTTTCCTTTCCTTTTCATATACTTGTTCTTTTTCTTCATCATGTCTTCTCCTACAACCCTGATGGCAACTTCAAGAAACACCCTCCCTTTAGAACCCACAACATTGACTAATGATGCATTGCCGGCCTTCATTCAGCGATCATCTCGACACCTAGCTACAACTACGACTCCTACTTCTCGTCCCTCTAACTCTCTTAAACTCTCTAAAGGAAAGCAAGAACAAACGTCGACAGCGACTCATTCAACCCTTCATAGTTGCAAGCCAAAAGGACCTGTTAGATGGTCTTCTCCTAGTCCATTACGTAATAATGTGGAATGCTAAAAATCCTTAGGCTTTGAGCTTAATAGTTTTTCATCACGAATATCATTTATATGTGACTTTTTAATTTTCTTCTTCTTATTTATGTGTATTGATATGGTATACAACGATTTTCACCCTTAAAATTACTTATAACTTATTTTTGTTTTTCTTCTTTAATTTATGTATTATTATTGATTCAGTATATCAAGATAAATGTGTTCCAATAAA

mRNA sequence

CTTTAGTGTTTTGAATTATTTGAATTGTTATTCCTAATTATATTTTCAATGACTTCAAGGTGTTTTCCTTTCCTTTTCATATACTTGTTCTTTTTCTTCATCATGTCTTCTCCTACAACCCTGATGGCAACTTCAAGAAACACCCTCCCTTTAGAACCCACAACATTGACTAATGATGCATTGCCGGCCTTCATTCAGCGATCATCTCGACACCTAGCTACAACTACGACTCCTACTTCTCGTCCCTCTAACTCTCTTAAACTCTCTAAAGGAAAGCAAGAACAAACGTCGACAGCGACTCATTCAACCCTTCATAGTTGCAAGCCAAAAGGACCTGTTAGATGGTCTTCTCCTAGTCCATTACGTAATAATGTGGAATGCTAAAAATCCTTAGGCTTTGAGCTTAATAGTTTTTCATCACGAATATCATTTATATGTGACTTTTTAATTTTCTTCTTCTTATTTATGTGTATTGATATGGTATACAACGATTTTCACCCTTAAAATTACTTATAACTTATTTTTGTTTTTCTTCTTTAATTTATGTATTATTATTGATTCAGTATATCAAGATAAATGTGTTCCAATAAA

Coding sequence (CDS)

ATGACTTCAAGGTGTTTTCCTTTCCTTTTCATATACTTGTTCTTTTTCTTCATCATGTCTTCTCCTACAACCCTGATGGCAACTTCAAGAAACACCCTCCCTTTAGAACCCACAACATTGACTAATGATGCATTGCCGGCCTTCATTCAGCGATCATCTCGACACCTAGCTACAACTACGACTCCTACTTCTCGTCCCTCTAACTCTCTTAAACTCTCTAAAGGAAAGCAAGAACAAACGTCGACAGCGACTCATTCAACCCTTCATAGTTGCAAGCCAAAAGGACCTGTTAGATGGTCTTCTCCTAGTCCATTACGTAATAATGTGGAATGCTAA

Protein sequence

MTSRCFPFLFIYLFFFFIMSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQEQTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC
Homology
BLAST of MELO.jh018749.1 vs. NCBI nr
Match: KGN54792.1 (hypothetical protein Csa_012277 [Cucumis sativus])

HSP 1 Score: 188 bits (477), Expect = 1.66e-59
Identity = 97/111 (87.39%), Postives = 103/111 (92.79%), Query Frame = 0

Query: 1   MTSRCFPFLFIYLFFFFIMSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTT 60
           MT RCFPFLFIYLFF FIMSSPTTLMATSRN LPLEPTTLTNDAL +F+QRSSRHLATTT
Sbjct: 1   MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDAL-SFVQRSSRHLATTT 60

Query: 61  TPTSRPSNSLKLSKGKQEQTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 111
           TPTSR SNSLKLSKG+ EQTST THSTL SCKPKGP+RWSSPSPLRNN++C
Sbjct: 61  TPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNLKC 110

BLAST of MELO.jh018749.1 vs. NCBI nr
Match: KAA0060707.1 (hypothetical protein E6C27_scaffold496G00110 [Cucumis melo var. makuwa] >TYK21843.1 hypothetical protein E5676_scaffold1073G00050 [Cucumis melo var. makuwa])

HSP 1 Score: 184 bits (466), Expect = 4.65e-58
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0

Query: 19  MSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQE 78
           MSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQE
Sbjct: 1   MSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQE 60

Query: 79  QTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 111
           QTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC
Sbjct: 61  QTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 93

BLAST of MELO.jh018749.1 vs. NCBI nr
Match: KGN54790.1 (hypothetical protein Csa_012154 [Cucumis sativus])

HSP 1 Score: 132 bits (333), Expect = 1.42e-37
Identity = 74/111 (66.67%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MTSRCFPFLFIYLFFFFIMSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTT 60
           M  RCFPFLFIYLF F + SS   +MATSRN LPL PTTLTN+ALP F Q+SSR+L  TT
Sbjct: 1   MALRCFPFLFIYLFLFIMSSSTILIMATSRNLLPLPPTTLTNNALP-FTQQSSRYLVATT 60

Query: 61  TPTSRPSNSLKLSKGKQEQTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 111
           T T   S  LK+ K  QEQTST THSTL SC PKGP+ WSSPSP RN V+C
Sbjct: 61  TSTMTHST-LKMPKENQEQTSTMTHSTLQSCMPKGPITWSSPSPKRNGVQC 109

BLAST of MELO.jh018749.1 vs. NCBI nr
Match: KAG6595583.1 (hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 58.9 bits (141), Expect = 1.36e-08
Identity = 43/109 (39.45%), Postives = 58/109 (53.21%), Query Frame = 0

Query: 1   MTSRCFPFLFIYLFFFFIMSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTT 60
           M  R   FL I  F   ++SSP+T++ATSR+ L L+    T ++ P              
Sbjct: 1   MGPRGGAFLTIIFFLLIVISSPSTIIATSRHMLALD----TKESPPQPPMDKP------- 60

Query: 61  TPTSRPSNSLKLSKGKQEQTSTATHSTLHSCKPKGPVRWSSPSPLRNNV 109
            PTS   ++L L  G +        S + SCKPKGPVRWSSPSP+RNN+
Sbjct: 61  -PTSNDFDTLSLPNGTKAMP-PMPESAVRSCKPKGPVRWSSPSPIRNNL 96

BLAST of MELO.jh018749.1 vs. ExPASy TrEMBL
Match: A0A0A0L2F6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499295 PE=4 SV=1)

HSP 1 Score: 188 bits (477), Expect = 8.06e-60
Identity = 97/111 (87.39%), Postives = 103/111 (92.79%), Query Frame = 0

Query: 1   MTSRCFPFLFIYLFFFFIMSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTT 60
           MT RCFPFLFIYLFF FIMSSPTTLMATSRN LPLEPTTLTNDAL +F+QRSSRHLATTT
Sbjct: 1   MTPRCFPFLFIYLFFLFIMSSPTTLMATSRNILPLEPTTLTNDAL-SFVQRSSRHLATTT 60

Query: 61  TPTSRPSNSLKLSKGKQEQTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 111
           TPTSR SNSLKLSKG+ EQTST THSTL SCKPKGP+RWSSPSPLRNN++C
Sbjct: 61  TPTSRRSNSLKLSKGRHEQTSTKTHSTLQSCKPKGPIRWSSPSPLRNNLKC 110

BLAST of MELO.jh018749.1 vs. ExPASy TrEMBL
Match: A0A5A7V1K1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1073G00050 PE=4 SV=1)

HSP 1 Score: 184 bits (466), Expect = 2.25e-58
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0

Query: 19  MSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQE 78
           MSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQE
Sbjct: 1   MSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTTTPTSRPSNSLKLSKGKQE 60

Query: 79  QTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 111
           QTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC
Sbjct: 61  QTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 93

BLAST of MELO.jh018749.1 vs. ExPASy TrEMBL
Match: A0A0A0KYN0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499280 PE=4 SV=1)

HSP 1 Score: 132 bits (333), Expect = 6.86e-38
Identity = 74/111 (66.67%), Postives = 82/111 (73.87%), Query Frame = 0

Query: 1   MTSRCFPFLFIYLFFFFIMSSPTTLMATSRNTLPLEPTTLTNDALPAFIQRSSRHLATTT 60
           M  RCFPFLFIYLF F + SS   +MATSRN LPL PTTLTN+ALP F Q+SSR+L  TT
Sbjct: 1   MALRCFPFLFIYLFLFIMSSSTILIMATSRNLLPLPPTTLTNNALP-FTQQSSRYLVATT 60

Query: 61  TPTSRPSNSLKLSKGKQEQTSTATHSTLHSCKPKGPVRWSSPSPLRNNVEC 111
           T T   S  LK+ K  QEQTST THSTL SC PKGP+ WSSPSP RN V+C
Sbjct: 61  TSTMTHST-LKMPKENQEQTSTMTHSTLQSCMPKGPITWSSPSPKRNGVQC 109

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN54792.11.66e-5987.39hypothetical protein Csa_012277 [Cucumis sativus][more]
KAA0060707.14.65e-58100.00hypothetical protein E6C27_scaffold496G00110 [Cucumis melo var. makuwa] >TYK2184... [more]
KGN54790.11.42e-3766.67hypothetical protein Csa_012154 [Cucumis sativus][more]
KAG6595583.11.36e-0839.45hypothetical protein SDJN03_12136, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L2F68.06e-6087.39Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499295 PE=4 SV=1[more]
A0A5A7V1K12.25e-58100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0KYN06.86e-3866.67Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G499280 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..89
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 52..111

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh018749.1.t1MELO.jh018749.1.t1mRNA