MELO.jh018397.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018397.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 14046334 .. 14046540 (-)
RNA-Seq ExpressionMELO.jh018397.1
SyntenyMELO.jh018397.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACGGCACAGGAATAGCTCACACATGATAGCAGACGACGAGCGGCTGAACCACAAGGGGAGTCGTTCTATCACGGTGGTGTGGACGGAAAAAACGGGCGACAGCTTTGGAAGGAGGAGTCGAGAACGGAAAGGGCGACGCTAGTCGGAGCTTGGGAAGAAGAAGAAGAAGAAAATATCAAGAGGGGGAGGGTGTCATTTTGTCTAG

mRNA sequence

ATACGGCACAGGAATAGCTCACACATGATAGCAGACGACGAGCGGCTGAACCACAAGGGGAGTCGTTCTATCACGGTGGTGTGGACGGAAAAAACGGGCGACAGCTTTGGAAGGAGGAGTCGAGAACGGAAAGGGCGACGCTAGTCGGAGCTTGGGAAGAAGAAGAAGAAGAAAATATCAAGAGGGGGAGGGTGTCATTTTGTCTAG

Coding sequence (CDS)

ATGATAGCAGACGACGAGCGGCTGAACCACAAGGGGAGTCGTTCTATCACGGTGGTGTGGACGGAAAAAACGGGCGACAGCTTTGGAAGGAGGAGTCGAGAACGGAAAGGGCGACGCTAG

Protein sequence

MIADDERLNHKGSRSITVVWTEKTGDSFGRRSRERKGRR
Homology
[Close]
BLAST of MELO.jh018397.1 vs. NCBI nr
Match: TYK28100.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 50.4 bits (119), Expect = 9.01e-06
Identity = 22/26 (84.62%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 5  DERLNHKGSRSITVVWTEKTGDSFGR 30
          DERLN KGSRS+ VVWTE TGDSFGR
Sbjct: 24 DERLNCKGSRSVAVVWTETTGDSFGR 49

[Close]
BLAST of MELO.jh018397.1 vs. ExPASy TrEMBL
Match: A0A5D3DXY0 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1467G00030 PE=4 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 4.36e-06
Identity = 22/26 (84.62%), Postives = 23/26 (88.46%), Query Frame = 0 

Query: 5  DERLNHKGSRSITVVWTEKTGDSFGR 30
          DERLN KGSRS+ VVWTE TGDSFGR
Sbjct: 24 DERLNCKGSRSVAVVWTETTGDSFGR 49

The following BLAST results are available for this feature:
BLAST of MELO.jh018397.1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK28100.19.01e-0684.62DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa][more]
BLAST of MELO.jh018397.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh018397.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DXY04.36e-0684.62DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of MELO.jh018397.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh018397.1.t1MELO.jh018397.1.t1mRNA