MELO.jh018332.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018332.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 12854719 .. 12857112 (+)
RNA-Seq ExpressionMELO.jh018332.1
SyntenyMELO.jh018332.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTACAACAACATGTTTAATATCCTTCTACCCTTTCTTCTTCTACTTGCATCTCAATCTCTGTAGTCCTTTCATCCATCAATGTTGCATTGCTTCAACTCCTCTCAATTTCACCTTCCTCAAATGCTACATCTCCAGCTTGTAAGCCAATCGCCATTCATCAATGCTCCTCATTTGATATTTATCAAGTGGTGGAAGCGCCGTCTTTTCTATGACATCCAAAATCCTCCCTGTTTTCCCAAGAATGTAAGCAGCTTCTCTCACGCTCTTCTCTCGTTTCTCAATCACAAAGTTTGCACATTTTGTTGATATCACTTTCTCCAAATTCGTCAAGCATGCTCCCATTATGCCAGAAATCGTGGCTTCCATTTCTAAGAACAATTGTTCGTTTGTATACCGGTATTTCTTTTCGTACTTTAGCAGCATCGATTCGCTTATCCTGTACATACAGTTCGCAGCCAATATCTTGATTGGCCATTTTGAAGTACTTAGTTTCAAGCATAGATGTTCATTAGTAGTCTTCTCCTCTGTGTAAATTTTCTTTGCTTCATCTGAAAATTGTTGGAAAACTTCGTTTGGGGTTTCTTTATGATGTGAAATTTTGTGGAGGTCTATGCCTAGCCATTGATTGTTGAGATCCATTCCTAGCCAAACCATTTCTGCTGCCTTTTTTAGGTTTATGAAATTCCCTTCCGTGTCGAAGCAATCTTCGATGCGTCTTATGTAGCGGAGACCTTCATTTACTGCGGTCACCAAGTGTTTGATTAAATGACGTCTTATGTTTGGAAGAGAAATTGCTATGGCTGTTAATGTCACCACAGGAAGCGCCCAGCAATTCGGGGGCTCTTTGGAATCTAGACATGGAACTTGATGGTTATCAAACTCTGCCACTCCCTTGAAACCTTGTGATATGATCGTTCCTTCCAATAGGTGAATGAGAATCTTAGGTTTTTTCTTCTGCCCTTTCTGAATCCAATGATGTACGGCATGATAATTGTTTGTTACCATCACGTGAACTAGATCATCTTCACCTTCAAGATACAGAACGAAACGACTTAGATCTAGCTTTGAATCAGCATCATCTTCTGACCCTGAATTGCTGAGAGAAATGGTGCTGTTAAACCACAGCTTGTTTTTCAAACTCTTGAAACAGTCGCAGCATGAGAAGATTCCTCTGAAAAAGAAAATGGAAATAAGCCGAATCACTTTGCTTATAAACACTATTACCGTTTGTAGGATGATACATGCATCCAGAAACGTGTTTCTTGCATTATGAGCAAGCTTTCTGCATCCTCTATTTTTAACTCTGATAGTTAATGGAGACTCTTTCATCTCTACTAGATATCGAATCCAATAGTATTCTAATTTGAATTCCTTCTTGTAACCCCCATTTCTCAGGTTTGGACACCTGAATTTTATAGCTGTAAACCATCTGATTGCCGGGGCGACAGTCCCTACTACAACTGCTACACACTGTATCACGAGGATAAAAGTGATTGACCACTTATAATCAGACTGGCCGTTGCAGAACTTAAATGATCTCTTCATCAAGTAGGATGTAAGAATAGCCTCTGCTAAAATTGCAGCGCTAAGAAGACTGATCGCCCCAGAAGCAGTACATGTGGCGGATCGGCCCATCACAAACTGGGGACTGGTTGTTTGAGCCATCATCCAATATTTCATCAAACCCACTTTGAGTCTTTCGATGACTAGTTTGTCTCCTTTTCCATTTGCTGCACACTCTTTTGATGCTAATTCATGTCTTACGCCATACTTCATTTCCAGGTAGCTCTTAGTTGATGGAACAACCGAAGCAGACAAACTCAAGATACCCAGTAAAACAAGCATCAAGATTAGAACGGAAACGTGCTCTTTCATATAAACGTAGACCACTCCAGTACCCATCTCCATACCGACGTTTACGATGAGGGTAATAACAAGAATCCCTAGAGCCATAACATTCATAAAAATTTCTTGATTTTCCATAGACCCAAGAGAAGGCATACAATTAGCCATGATGGTGCACATCAACACAGCACTACTTAGCTTTGCAAGCTGATCCTCTCTGCCAGGCATGGAGGTGTTGAGATCCACAGAAAGCTTGATTGCCACAGCTATCAGGGTTAGGGAAGTGGAGTTAAGAGTGAAGAACTTACAGGGAAACCAGAATTTTCTGTGGAGGATGCCGTGGATGAGATCAGCAGCCATCGCTAAGAGGCAGACCAAAGAGGCTGCAGCTATGTAGATTCCAATCCATGGCAAGGGCTCGCTGTACTTGGCATCATTCAGGTACCCATCATTGTTGCAACCAACTACACCCATCTCTCTCTTGTTCTGCTTGTGTATCTAAATTGTTTGATCCAAATTTTGTGCTATATATTGAAGAAGTGTGGTTT

mRNA sequence

TTACAACAACATGTTTAATATCCTTCTACCCTTTCTTCTTCTACTTGCATCTCAATCTCTGTAGTCCTTTCATCCATCAATGTTGCATTGCTTCAACTCCTCTCAATTTCACCTTCCTCAAATGCTACATCTCCAGCTTGTAAGCCAATCGCCATTCATCAATGCTCCTCATTTGATATTTATCAAGTGGTGGAAGCGCCGTCTTTTCTATGACATCCAAAATCCTCCCTGTTTTCCCAAGAATGTTTGGACACCTGAATTTTATAGCTGTAAACCATCTGATTGCCGGGGCGACAGTCCCTACTACAACTGCTACACACTGTATCACGAGGATAAAAGTGATTGACCACTTATAATCAGACTGGCCGTTGCAGAACTTAAATGATCTCTTCATCAAGTAGGATGTAAGAATAGCCTCTGCTAAAATTGCAGCGCTAAGAAGACTGATCGCCCCAGAAGCAGTACATGTGGCGGATCGGCCCATCACAAACTGGGGACTGGTTGTTTGAGCCATCATCCAATATTTCATCAAACCCACTTTGAGTCTTTCGATGACTAGTTTGTCTCCTTTTCCATTTGCTGCACACTCTTTTGATGCTAATTCATGTCTTACGCCATACTTCATTTCCAGGTAGCTCTTAGTTGATGGAACAACCGAAGCAGACAAACTCAAGATACCCAGTAAAACAAGCATCAAGATTAGAACGGAAACGTGCTCTTTCATATAAACGTAGACCACTCCAGTACCCATCTCCATACCGACGTTTACGATGAGGGTAATAACAAGAATCCCTAGAGCCATAACATTCATAAAAATTTCTTGATTTTCCATAGACCCAAGAGAAGGCATACAATTAGCCATGATGGTGCACATCAACACAGCACTACTTAGCTTTGCAAGCTGATCCTCTCTGCCAGGCATGGAGGTGTTGAGATCCACAGAAAGCTTGATTGCCACAGCTATCAGGGTTAGGGAAGTGGAGTTAAGAGTGAAGAACTTACAGGGAAACCAGAATTTTCTGTGGAGGATGCCGTGGATGAGATCAGCAGCCATCGCTAAGAGGCAGACCAAAGAGGCTGCAGCTATGTAGATTCCAATCCATGGCAAGGGCTCGCTGTACTTGGCATCATTCAGGTACCCATCATTGTTGCAACCAACTACACCCATCTCTCTCTTGTTCTGCTTGTGTATCTAAATTGTTTGATCCAAATTTTGTGCTATATATTGAAGAAGTGTGGTTT

Coding sequence (CDS)

ATGTTGCATTGCTTCAACTCCTCTCAATTTCACCTTCCTCAAATGCTACATCTCCAGCTTGTAAGCCAATCGCCATTCATCAATGCTCCTCATTTGATATTTATCAAGTGGTGGAAGCGCCGTCTTTTCTATGACATCCAAAATCCTCCCTGTTTTCCCAAGAATGTTTGGACACCTGAATTTTATAGCTGTAAACCATCTGATTGCCGGGGCGACAGTCCCTACTACAACTGCTACACACTGTATCACGAGGATAAAAGTGATTGA

Protein sequence

MLHCFNSSQFHLPQMLHLQLVSQSPFINAPHLIFIKWWKRRLFYDIQNPPCFPKNVWTPEFYSCKPSDCRGDSPYYNCYTLYHEDKSD
Homology
[Close]
BLAST of MELO.jh018332.1 vs. NCBI nr
Match: KAG7027438.1 (hypothetical protein SDJN02_11451, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 67.0 bits (162), Expect = 2.99e-11
Identity = 26/33 (78.79%), Postives = 30/33 (90.91%), Query Frame = 0 

Query: 56  VWTPEFYSCKPSDCRGDSPYYNCYTLYHEDKSD 88
           +WTPEFY CKPSDC G+SPYY+C TLYHEDK+D
Sbjct: 159 LWTPEFYGCKPSDCWGNSPYYHCNTLYHEDKTD 191

The following BLAST results are available for this feature:
BLAST of MELO.jh018332.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG7027438.12.99e-1178.79hypothetical protein SDJN02_11451, partial [Cucurbita argyrosperma subsp. argyro... [more]
BLAST of MELO.jh018332.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh018332.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh018332.1 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh018332.1.t1MELO.jh018332.1.t1mRNA