MELO.jh018262.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018262.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 11015257 .. 11017331 (+)
RNA-Seq ExpressionMELO.jh018262.1
SyntenyMELO.jh018262.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCCGCTACTGCAACATGTTTTTGTTGTTTCTTTGGACACTATTCGTTTTGGTGCTGCCTCTATTTCTTCCACCGCTCCCGGCACCGCCCATGGTTCTTCTCTTTGTGCCTCTTGTTATCATGATGCTTCTTATCTTCTTCGCCTTGTCGACTTCTCAACTTCCAACCACTACAGTCGCGTCTGAAGTTGTTGACGACATTTTTGTATAGTACAACACAGGTCCTCCAACTCCTATACTTTTTACGATGATATGGTATAGTTTACTTTAGATCTGGTCTCTCATGATTTTGCGTTGTACAATGAAAATGTATCTAAATGGACCTCTTTTCATTTATTCTTGCCATCTTATAGACTATGTTCATATCTCAATCAAATTCGATAATTTTGATTTAATTTTTGTGATCTTGGTTGAATAGTTGTCCTTTTTTTGGGATTGCGACGACTTGAAGAAGAAGAAAAGGAAATAATGAAGAAAAGAATGGGTGAGTTGGAAGGGAAAGAGAATAGGGTTTCTTATTTTGTTTTACAAAATTAGAGGATATATATTTGTGAGTTGGAAGTTTGTACATAAAGCTTTAGAGTTGTAATAATATATATTATTGTTTCAACGCACTGTGTTTTAATTAGAGCCAACCAACTACCTTTTTGGTTTGTCTTCCAAATCTAATAATTTTGCTTTCCGACAAAATTGAATGTTTGGTGGTCATCACAAACATGTTTAAGACAAAATTACCTAAATATTAGACTCTTGTTTGGAAATTGGGTTGAGGGACATTCCTCCAAAATTATTTTGTGAGTTTACTGGACCATGGAGGGATTCTGTAATGCTTTAAATGGTTTACATTGTTACTACTTGAAGAACACGTTTATAAATAAAAGGGAAAGAACACCCACATTTAGTCCTCTTATCTTTAAGAGGTTTAAATAATTCGAACATATTACACATTTAGGTTTTAACTTTTGAGTTTGATTTCAAGTATTGAATGAAAAATTTGGGATAGAAATATGTAGTATTATTTTAATTTCAATTACATTCCCACGTTGATTAATCTTGGAAGTCCCTTTTTATACTCATTGATTGATCAATGGATTTGGACCTTTAGGGCACCCAAGTTTTTGAAAGAGGGAGGAGATAAGCTGGGTTTGGACTAATCTTGGAAGTCCCTTTTTATACTCATTGATTGATCAATGGATTTGGACCTTTAGGGCACCCAAGTTTTTGAAAGAGGGAGGAGATAAGCTGGGTTTGGACTAATCTTGGAAGTCCCTTTTTATACTCATTGATTGATCAATGGATTTGGACCTTTAGGGCACCCAAGTTTTTGAAAGAGGGAGGAGATAAGCTGGGTTTGGACTAATCTTGGAAGTCTTTTTATACTCATTGATTGATCAATGGATTTGGACCTTTAGGGCACCCAAGTTTTTGAAAGAGGGAGGAGATAAGCTGGGTTTGGACCCTTAGGGCATGCTGTAAGTTTGGTGTGGTGAGGAGAGGTAATCTATATATTCCTTTTACTAAAAGTTTCTTCTAACTTTCAAAACGTTGAAACCTTTTTTCATGGCAAACTTGTGATTGTTGGCCACTCCTTATCTATCACTATATATACATCTCAGTTTTCTCTCATTCCAAACACACGAAAATCGTTCTTCTCATTTTGTGATATAAACAAAAGTTCCCGTCCTATAGTTGAGTGTTCTTTAATACCAGTTGAATTCGTGCAAAATTAATTGAAGAAGAGAGGTTGTTTTATCTTGGAGACGACGAGACAATTATCTGTTTGCACAATCCATGGTGACTATTGGCCACTTCTTACCTATCACTATATATACATCTCAATTTTATCTCATTCCAAACACACAAAAACCATTCTTCTCATTTTTTGATATAAACAAATGTTCCCGACCTATAGTTAAATGTTTTTAAATACCAGTTGATTTCGCGCAAAATCAATTAAAGAAGAGAGGTTCTTTTATCTTGGAGACGTCGAGGCAATTATTTGTTTGCACAATCCAGAGCAGAGTCGCAAAATGTCTTAAAGAGACCGTGTTCTGTGACTCAGTTATTTATTAA

mRNA sequence

ATGGTCCGCTACTGCAACATGTTTTTGTTGTTTCTTTGGACACTATTCGTTTTGGTGCTGCCTCTATTTCTTCCACCGCTCCCGGCACCGCCCATGGTTCTTCTCTTTGTGCCTCTTGTTATCATGATGCTTCTTATCTTCTTCGCCTTGTCGACTTCTCAACTTCCAACCACTACAGTCGCGTCTGAATTGTCCTTTTTTTGGGATTGCGACGACTTGAAGAAGAAGAAAAGGAAATAATGAAGAAAAGAATGGTTGATTTCGCGCAAAATCAATTAAAGAAGAGAGGTTCTTTTATCTTGGAGACGTCGAGGCAATTATTTGTTTGCACAATCCAGAGCAGAGTCGCAAAATGTCTTAAAGAGACCGTGTTCTGTGACTCAGTTATTTATTAA

Coding sequence (CDS)

ATGGTCCGCTACTGCAACATGTTTTTGTTGTTTCTTTGGACACTATTCGTTTTGGTGCTGCCTCTATTTCTTCCACCGCTCCCGGCACCGCCCATGGTTCTTCTCTTTGTGCCTCTTGTTATCATGATGCTTCTTATCTTCTTCGCCTTGTCGACTTCTCAACTTCCAACCACTACAGTCGCGTCTGAATTGTCCTTTTTTTGGGATTGCGACGACTTGAAGAAGAAGAAAAGGAAATAA

Protein sequence

MVRYCNMFLLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTVASELSFFWDCDDLKKKKRK
Homology
BLAST of MELO.jh018262.1 vs. NCBI nr
Match: KGN54720.1 (hypothetical protein Csa_012521 [Cucumis sativus])

HSP 1 Score: 92.4 bits (228), Expect = 5.69e-22
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 0

Query: 1   MVRYCNMFLLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 60
           M RY NMFLLFLWTL +LVLPL LPPLP PPMV LFVPLVIMMLLIFFALSTSQ+PTTTV
Sbjct: 63  MARYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVFLFVPLVIMMLLIFFALSTSQVPTTTV 122

Query: 61  AS 62
           AS
Sbjct: 123 AS 124

BLAST of MELO.jh018262.1 vs. NCBI nr
Match: RQO91248.1 (hypothetical protein POPTR_006G037801 [Populus trichocarpa])

HSP 1 Score: 52.8 bits (125), Expect = 5.49e-07
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 14 TLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTVAS 62
          T+F+LVLPL LPPLP PP+VLLFVP+ IM LL+F A S S+LP T   S
Sbjct: 17 TVFLLVLPLVLPPLPPPPLVLLFVPVFIMSLLVFLAFSPSKLPDTPSTS 65

BLAST of MELO.jh018262.1 vs. NCBI nr
Match: PNT29578.1 (hypothetical protein POPTR_006G038100 [Populus trichocarpa])

HSP 1 Score: 50.1 bits (118), Expect = 6.62e-06
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 1  MVRYCN----MFLLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLP 60
          MV YC     + ++ + T+ +LVLPL LPPLP PP++LLFVPL+I+ LL+  AL +SQ+P
Sbjct: 1  MVSYCRTSCFIMVMVVLTISILVLPLVLPPLPPPPLILLFVPLMILSLLVLLALRSSQMP 60

Query: 61 TTTVAS 62
               S
Sbjct: 61 NMDTTS 66

BLAST of MELO.jh018262.1 vs. NCBI nr
Match: KAG5252697.1 (hypothetical protein IMY05_001G0035600 [Salix suchowensis])

HSP 1 Score: 48.1 bits (113), Expect = 3.78e-05
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0

Query: 14 TLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALST-SQLPTTTVASEL 64
          T+ +LVLPL LPPLP PPM LLFVP++IM LL+  ALS  SQ+P  + AS +
Sbjct: 17 TVSILVLPLVLPPLPPPPMALLFVPVMIMSLLVLLALSPISQMPNVSTASAI 68

BLAST of MELO.jh018262.1 vs. NCBI nr
Match: KAG4927809.1 (hypothetical protein JHK85_054295 [Glycine max] >KRG95138.1 hypothetical protein GLYMA_19G132700v4 [Glycine max])

HSP 1 Score: 48.5 bits (114), Expect = 4.97e-05
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 1  MVRYCNMFLLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 60
          MV Y ++ +L L TLF+L+LPL LPPLP PP++LLFVP+ ++++L F A S S LP   V
Sbjct: 35 MVSY-SVLILALLTLFILLLPLVLPPLPPPPLLLLFVPVFLLVVLFFLAFSPSTLPNMAV 93

BLAST of MELO.jh018262.1 vs. ExPASy TrEMBL
Match: A0A0A0KYG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433470 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.75e-22
Identity = 54/62 (87.10%), Postives = 56/62 (90.32%), Query Frame = 0

Query: 1   MVRYCNMFLLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 60
           M RY NMFLLFLWTL +LVLPL LPPLP PPMV LFVPLVIMMLLIFFALSTSQ+PTTTV
Sbjct: 63  MARYSNMFLLFLWTLSLLVLPLLLPPLPPPPMVFLFVPLVIMMLLIFFALSTSQVPTTTV 122

Query: 61  AS 62
           AS
Sbjct: 123 AS 124

BLAST of MELO.jh018262.1 vs. ExPASy TrEMBL
Match: A0A3N7GCD6 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G037801 PE=4 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 2.66e-07
Identity = 32/49 (65.31%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 14 TLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTVAS 62
          T+F+LVLPL LPPLP PP+VLLFVP+ IM LL+F A S S+LP T   S
Sbjct: 17 TVFLLVLPLVLPPLPPPPLVLLFVPVFIMSLLVFLAFSPSKLPDTPSTS 65

BLAST of MELO.jh018262.1 vs. ExPASy TrEMBL
Match: U5G904 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G038100 PE=4 SV=1)

HSP 1 Score: 50.1 bits (118), Expect = 3.20e-06
Identity = 32/66 (48.48%), Postives = 45/66 (68.18%), Query Frame = 0

Query: 1  MVRYCN----MFLLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLP 60
          MV YC     + ++ + T+ +LVLPL LPPLP PP++LLFVPL+I+ LL+  AL +SQ+P
Sbjct: 1  MVSYCRTSCFIMVMVVLTISILVLPLVLPPLPPPPLILLFVPLMILSLLVLLALRSSQMP 60

Query: 61 TTTVAS 62
               S
Sbjct: 61 NMDTTS 66

BLAST of MELO.jh018262.1 vs. ExPASy TrEMBL
Match: I1N8V0 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_19G132700 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.41e-05
Identity = 32/60 (53.33%), Postives = 44/60 (73.33%), Query Frame = 0

Query: 1  MVRYCNMFLLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 60
          MV Y ++ +L L TLF+L+LPL LPPLP PP++LLFVP+ ++++L F A S S LP   V
Sbjct: 35 MVSY-SVLILALLTLFILLLPLVLPPLPPPPLLLLFVPVFLLVVLFFLAFSPSTLPNMAV 93

BLAST of MELO.jh018262.1 vs. ExPASy TrEMBL
Match: A0A5B7AL58 (Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276 PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.47e-05
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0

Query: 14  TLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTVAS 62
           T+ +LVLP+ LPPLP PP++LLF+P++IM +LI  A S SQLP  TV S
Sbjct: 106 TVSLLVLPVVLPPLPPPPLMLLFIPILIMAVLILLAFSPSQLPNVTVTS 154

BLAST of MELO.jh018262.1 vs. TAIR 10
Match: AT2G41230.1 (unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 75; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 1.2e-04
Identity = 28/52 (53.85%), Postives = 36/52 (69.23%), Query Frame = 0

Query: 9  LLFLWTLFVLVLPLFLPPLPAPPMVLLFVPLVIMMLLIFFALSTSQLPTTTV 61
          LL   +L +L+LP FLPPLP PP  LL +PL++M+LLIF A S S  P+  V
Sbjct: 32 LLLFLSLLLLILPPFLPPLPPPPATLLLLPLLLMILLIFLAFSPSNEPSLAV 83

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN54720.15.69e-2287.10hypothetical protein Csa_012521 [Cucumis sativus][more]
RQO91248.15.49e-0765.31hypothetical protein POPTR_006G037801 [Populus trichocarpa][more]
PNT29578.16.62e-0648.48hypothetical protein POPTR_006G038100 [Populus trichocarpa][more]
KAG5252697.13.78e-0559.62hypothetical protein IMY05_001G0035600 [Salix suchowensis][more]
KAG4927809.14.97e-0553.33hypothetical protein JHK85_054295 [Glycine max] >KRG95138.1 hypothetical protein... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KYG72.75e-2287.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G433470 PE=4 SV=1[more]
A0A3N7GCD62.66e-0765.31Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G037801 PE=4 ... [more]
U5G9043.20e-0648.48Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G038100 PE=4 ... [more]
I1N8V02.41e-0553.33Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_19G132700 PE=4 SV=1[more]
A0A5B7AL582.47e-0559.18Uncharacterized protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_026276... [more]
Match NameE-valueIdentityDescription
AT2G41230.11.2e-0453.85unknown protein; Has 75 Blast hits to 75 proteins in 8 species: Archae - 0; Bact... [more]
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38928ARGOS7coord: 2..62
NoneNo IPR availablePANTHERPTHR38928:SF7SUBFAMILY NOT NAMEDcoord: 2..62

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh018262.1.t1MELO.jh018262.1.t1mRNA