MELO.jh018240.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh018240.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr08: 10964394 .. 10964652 (-)
RNA-Seq ExpressionMELO.jh018240.1
SyntenyMELO.jh018240.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTGCTCAGCTGTTGTTGTCATGCCAAGAAGAGGAAGAGGTGGTGGACAAGCTTCGAAAGCAGAACAATTGGTTAATGTGCAAGCAATGAGAGAAAGAGATGAGTAATTGTTTGCTAAGGTGAATTTGGAGAAGCAATTTAGCATAGAAAGATTGAAGGCACTAGGAGCCATGAATTTCGAAGGGACTGCGAATCTAGCTAACGTGGAAAAGTGGTTAAGCTTAGTAGAAAAGCACTTTGGAGTAATGGATTGTCCTTAA

mRNA sequence

GTGCTCAGCTGTTGTTGTCATGCCAAGAAGAGGAAGAGGTGGTGGACAAGCTTCGAAAGCAGAACAATTGGTTAATGTGCAAGCAATGAGAGAAAGAGATGAGTAATTGTTTGCTAAGGTGAATTTGGAGAAGCAATTTAGCATAGAAAGATTGAAGGCACTAGGAGCCATGAATTTCGAAGGGACTGCGAATCTAGCTAACGTGGAAAAGTGGTTAAGCTTAGTAGAAAAGCACTTTGGAGTAATGGATTGTCCTTAA

Coding sequence (CDS)

ATGAATTTCGAAGGGACTGCGAATCTAGCTAACGTGGAAAAGTGGTTAAGCTTAGTAGAAAAGCACTTTGGAGTAATGGATTGTCCTTAA

Protein sequence

MNFEGTANLANVEKWLSLVEKHFGVMDCP
Homology
BLAST of MELO.jh018240.1 vs. NCBI nr
Match: KAA0025993.1 (uncharacterized protein E6C27_scaffold34G003140 [Cucumis melo var. makuwa])

HSP 1 Score: 67.8 bits (164), Expect = 3.08e-13
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0

Query: 1   MNFEGTANLANVEKWLSLVEKHFGVMDCP 29
           MNFEGTANLANVEKWLSLVEKHFGVMDCP
Sbjct: 92  MNFEGTANLANVEKWLSLVEKHFGVMDCP 120

BLAST of MELO.jh018240.1 vs. NCBI nr
Match: KAA0035024.1 (hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa] >TYK02358.1 hypothetical protein E5676_scaffold155G00590 [Cucumis melo var. makuwa])

HSP 1 Score: 50.8 bits (120), Expect = 1.10e-06
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 3  FEGTANLANVEKWLSLVEKHFGVMDC 28
          FEGT N ANVEKWLSL+EK+FGVM C
Sbjct: 51 FEGTTNPANVEKWLSLIEKYFGVMKC 76

BLAST of MELO.jh018240.1 vs. NCBI nr
Match: TYK26902.1 (uncharacterized protein E5676_scaffold699G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 48.5 bits (114), Expect = 1.30e-05
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   MNFEGTANLANVEKWLSLVEKHFGVMDC 28
           M F+GT + A+VEKWLSL+EK FGVMDC
Sbjct: 76  MTFKGTTDSADVEKWLSLIEKCFGVMDC 103

BLAST of MELO.jh018240.1 vs. NCBI nr
Match: KAA0042293.1 (uncharacterized protein E6C27_scaffold824G00880 [Cucumis melo var. makuwa])

HSP 1 Score: 47.0 bits (110), Expect = 5.04e-05
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query: 1   MNFEGTANLANVEKWLSLVEKHFGVMDC 28
           M F+GT +  +VEKWLSL+EK FGVMDC
Sbjct: 75  MTFKGTTDSTDVEKWLSLIEKCFGVMDC 102

BLAST of MELO.jh018240.1 vs. NCBI nr
Match: TYK23138.1 (uncharacterized protein E5676_scaffold142G001420 [Cucumis melo var. makuwa])

HSP 1 Score: 44.7 bits (104), Expect = 1.61e-04
Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 0

Query: 4  EGTANLANVEKWLSLVEKHFGVMDCP 29
          EG ANLAN+EK LSLV+K FGV DCP
Sbjct: 7  EGIANLANLEKCLSLVKKCFGVTDCP 32

BLAST of MELO.jh018240.1 vs. ExPASy TrEMBL
Match: A0A5A7SMT2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G003140 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.49e-13
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0

Query: 1   MNFEGTANLANVEKWLSLVEKHFGVMDCP 29
           MNFEGTANLANVEKWLSLVEKHFGVMDCP
Sbjct: 92  MNFEGTANLANVEKWLSLVEKHFGVMDCP 120

BLAST of MELO.jh018240.1 vs. ExPASy TrEMBL
Match: A0A5D3BTQ7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold155G00590 PE=4 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 5.34e-07
Identity = 21/26 (80.77%), Postives = 23/26 (88.46%), Query Frame = 0

Query: 3  FEGTANLANVEKWLSLVEKHFGVMDC 28
          FEGT N ANVEKWLSL+EK+FGVM C
Sbjct: 51 FEGTTNPANVEKWLSLIEKYFGVMKC 76

BLAST of MELO.jh018240.1 vs. ExPASy TrEMBL
Match: A0A5D3DTR7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold699G00010 PE=4 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 6.31e-06
Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0

Query: 1   MNFEGTANLANVEKWLSLVEKHFGVMDC 28
           M F+GT + A+VEKWLSL+EK FGVMDC
Sbjct: 76  MTFKGTTDSADVEKWLSLIEKCFGVMDC 103

BLAST of MELO.jh018240.1 vs. ExPASy TrEMBL
Match: A0A5A7TGE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold824G00880 PE=4 SV=1)

HSP 1 Score: 47.0 bits (110), Expect = 2.44e-05
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0

Query: 1   MNFEGTANLANVEKWLSLVEKHFGVMDC 28
           M F+GT +  +VEKWLSL+EK FGVMDC
Sbjct: 75  MTFKGTTDSTDVEKWLSLIEKCFGVMDC 102

BLAST of MELO.jh018240.1 vs. ExPASy TrEMBL
Match: A0A5D3DI51 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold142G001420 PE=4 SV=1)

HSP 1 Score: 44.7 bits (104), Expect = 7.79e-05
Identity = 20/26 (76.92%), Postives = 22/26 (84.62%), Query Frame = 0

Query: 4  EGTANLANVEKWLSLVEKHFGVMDCP 29
          EG ANLAN+EK LSLV+K FGV DCP
Sbjct: 7  EGIANLANLEKCLSLVKKCFGVTDCP 32

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0025993.13.08e-13100.00uncharacterized protein E6C27_scaffold34G003140 [Cucumis melo var. makuwa][more]
KAA0035024.11.10e-0680.77hypothetical protein E6C27_scaffold57G00740 [Cucumis melo var. makuwa] >TYK02358... [more]
TYK26902.11.30e-0571.43uncharacterized protein E5676_scaffold699G00010 [Cucumis melo var. makuwa][more]
KAA0042293.15.04e-0567.86uncharacterized protein E6C27_scaffold824G00880 [Cucumis melo var. makuwa][more]
TYK23138.11.61e-0476.92uncharacterized protein E5676_scaffold142G001420 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7SMT21.49e-13100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BTQ75.34e-0780.77Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3DTR76.31e-0671.43Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7TGE02.44e-0567.86Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3DI517.79e-0576.92Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh018240.1.t1MELO.jh018240.1.t1mRNA