MELO.jh016482.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh016482.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 25357597 .. 25358442 (+)
RNA-Seq ExpressionMELO.jh016482.1
SyntenyMELO.jh016482.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AGCAACAGAGTAGAAGGAAGAAAGCAACAAACCGTGACTTCAATCGGAACCCTGGTGTCAATCCGATGCTGGTAATAGAGATCGATGCAGTCAACATCGAGACGCTTCAAACTAGCCTCGCAAGCGGCTCTAACATAGGCAGGGTCTCCACGAATCTCCCTCTTACCATCGGCGAAACTAATTGCAAATTTAGTGGCAAGTTCGGCCTTGTCTCTGTAGCCGTCCTTGAGAGCCTTACCGACGAGGATTTCGTTGGTGAACGGGCCGTAGATGTCGGAGGTGTCGAGAAGAGTGATGCCGCTGTCGATGGCGTGGTGAATCAAAGCGATCATGTCGGAGTCGGGCTTGGGAGGGCCGTAGAAGGCGGACATGCCCATGCAGCCGAGACCTTGTGCGGACACTTCGAGGCCTTGAGAACCGAGCTTGATTCTAGGAACTTGAGAAGCCATTATGAGGTCGCCGGAGGAAAGGAAAATGGTCGGAGTGGAAGAAGGAGATGGGAAATGGGTTAATTTATCTACGGATTTAGTGGTGGTTGGTAGCTGGTGGCTGCGTCGATGGGGGTTACCTTTTTGCCTTTTTTTCCGGCAAAATTTTTGGAAACGAAAAAACTTAATGAAATTTTCCTTTTCTGTGTTGTCCGGTCCGCCGGCCTTTGAACTTGAAAATAATTATAAATTATATATAATTCCGAATTACTAATTATAAAATTATTTTAAAGTATTTACAAAATTATAATTTGTAATCGGAGAAATTAAGGATTACGGATAAATTTCGACCAATATCTATCATTGTAGCAATGTTTACCATTATTATATTTTATAAATATTTTGGTTCTATTTTTAA

mRNA sequence

AGCAACAGAGTAGAAGGAAGAAAGCAACAAACCGTGACTTCAATCGGAACCCTGGTGTCAATCCGATGCTGGTAATAGAGATCGATGCAGTCAACATCGAGACGCTTCAAACTAGCCTCGCAAGCGGCTCTAACATAGGCAGGGTCTCCACGAATCTCCCTCTTACCATCGGCGAAACTAATTGCAAATTTAGTGGCAAGTTCGGCCTTGTCTCTGTAGCCGTCCTTGAGAGCCTTACCGACGAGGATTTCGTTGGTGAACGGGCCGTAGATGTCGGAGGTGTCGAGAAGAGTGATGCCGCTGTCGATGGCGTGGTGAATCAAAGCGATCATGTCGGAGTCGGGCTTGGGAGGGCCGTAGAAGGCGGACATGCCCATGCAGCCGAGACCTTGTGCGGACACTTCGAGGCCTTGAGAACCGAGCTTGATTCTAGGAACTTGAGAAGCCATTATGAGGTCGCCGGAGGAAAGGAAAATGGTCGGAGTGGAAGAAGGAGATGGGAAATGGGTTAATTTATCTACGGATTTAGTGGTGGTTGGTAGCTGGTGGCTGCGTCGATGGGGGTTACCTTTTTGCCTTTTTTTCCGGCAAAATTTTTGGAAACGAAAAAACTTAATGAAATTTTCCTTTTCTGTGTTGTCCGGTCCGCCGGCCTTTGAACTTGAAAATAATTATAAATTATATATAATTCCGAATTACTAATTATAAAATTATTTTAAAGTATTTACAAAATTATAATTTGTAATCGGAGAAATTAAGGATTACGGATAAATTTCGACCAATATCTATCATTGTAGCAATGTTTACCATTATTATATTTTATAAATATTTTGGTTCTATTTTTAA

Coding sequence (CDS)

ATGCTGGTAATAGAGATCGATGCAGTCAACATCGAGACGCTTCAAACTAGCCTCGCAAGCGGCTCTAACATAGGCAGGGTCTCCACGAATCTCCCTCTTACCATCGGCGAAACTAATTGCAAATTTAGTGGCAAGTTCGGCCTTGTCTCTGTAGCCGTCCTTGAGAGCCTTACCGACGAGGATTTCGTTGGTGAACGGGCCGTAGATGTCGGAGGTGTCGAGAAGAGTGATGCCGCTGTCGATGGCGTGGTGAATCAAAGCGATCATGTCGGAGTCGGGCTTGGGAGGGCCGTAGAAGGCGGACATGCCCATGCAGCCGAGACCTTGTGCGGACACTTCGAGGCCTTGAGAACCGAGCTTGATTCTAGGAACTTGAGAAGCCATTATGAGGTCGCCGGAGGAAAGGAAAATGGTCGGAGTGGAAGAAGGAGATGGGAAATGGGTTAA

Protein sequence

MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESLTDEDFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCGHFEALRTELDSRNLRSHYEVAGGKENGRSGRRRWEMG
Homology
BLAST of MELO.jh016482.1 vs. NCBI nr
Match: TVU13687.1 (hypothetical protein EJB05_37107, partial [Eragrostis curvula])

HSP 1 Score: 110 bits (276), Expect = 9.48e-26
Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESL--- 60
           +LV+E+DAVN ETL+ +LA  + + RV+ +L L +GE   +  G+  L+    L+SL   
Sbjct: 75  VLVVEVDAVNAETLEAALACRAYVRRVAADLALAVGEGEAELGGQLHLLPHPALQSLHMG 134

Query: 61  ------TDEDFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCG 120
                 +  D VG  AVDVGGVE+ DA  DGVV++ DHV +GLGRAVEGGH+HAAE L  
Sbjct: 135 ITWSIFSANDLVGVGAVDVGGVEEGDAGGDGVVDERDHVRLGLGRAVEGGHSHAAEALRR 194

Query: 121 HFEALRTELDSRNLRSHYEVAGGKE 136
             + LR +L +R+   H     G+E
Sbjct: 195 DLQTLRAKLHARH--GHRSCCHGRE 217

BLAST of MELO.jh016482.1 vs. NCBI nr
Match: TVU03549.1 (hypothetical protein EJB05_50864, partial [Eragrostis curvula])

HSP 1 Score: 109 bits (273), Expect = 7.01e-25
Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESL--- 60
           +LV+E+DAVN ETL+ +LA  + + RV+ +L L +GE   +  G+  L+    L+SL   
Sbjct: 152 VLVVEVDAVNAETLEAALACRAYVRRVAADLALAVGEGEAELGGQLHLLPHLDLQSLHMG 211

Query: 61  ------TDEDFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCG 120
                 +  D VG  AVDVGGVE+ DA  DGVV++ DHV +GLGRAVEGGH+HAAE L  
Sbjct: 212 ITSSIFSANDLVGVGAVDVGGVEEGDAGGDGVVDERDHVRLGLGRAVEGGHSHAAEALRR 271

Query: 121 HFEALRTELDSRNLRSHYEVAGGKE 136
             + LR +L +R+   H     G+E
Sbjct: 272 DLQTLRAKLHARH--GHRSCCHGRE 294

BLAST of MELO.jh016482.1 vs. NCBI nr
Match: TVU13684.1 (hypothetical protein EJB05_37104, partial [Eragrostis curvula])

HSP 1 Score: 104 bits (259), Expect = 9.60e-25
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESL--- 60
           MLV+E+D V+ ET + +LA G++I RV+T+LPL + + + +  G+  L+    L+ L   
Sbjct: 1   MLVVEVDTVDAETPEAALARGAHIHRVTTDLPLAVDKNDTELGGQLHLLPHPALQRLLTD 60

Query: 61  ----------------------------TDEDFVGERAVDVGGVEKSDAAVDGVVNQSDH 120
                                        +ED VG  AVDVGGV++ DA  +GVVN+  H
Sbjct: 61  ITSNAFSANHKARGSNQSSTASGNKPYLAEEDLVGVGAVDVGGVKEGDAGGNGVVNERGH 120

Query: 121 VGVGLGRAVEGGHAHAAETLCGHFEALRTELDSRNLRSHYEVAGGKE 136
           +G+GLGRAV+GGHAHAAE L    +AL  +L +R++  H+    G+E
Sbjct: 121 LGLGLGRAVDGGHAHAAEALRRDLQALGAQLHARHI--HWSSGHGRE 165

BLAST of MELO.jh016482.1 vs. NCBI nr
Match: CAB3778538.1 (hypothetical protein LMG28614_00643 [Paraburkholderia ultramafica])

HSP 1 Score: 62.8 bits (151), Expect = 1.32e-08
Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESLTDE 60
           ML  ++DA+  E L+      ++    +   PL +     +F G   LV+        D+
Sbjct: 1   MLAEQVDAIGFEALERRFGDHADALGTTVERPLRVAVLEAEFGGDHDLVAKR-RHRFADQ 60

Query: 61  DFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCGHFEALRTEL 120
             V ERAV +GGVE+SDA ++G +NQ D  G+  G AV     HAAE+  GHF+   T+ 
Sbjct: 61  FLVDERAVALGGVEESDALLEGGLNQFDARGLLGGLAVAEAQTHAAESDRGHFQPAVTQF 119

BLAST of MELO.jh016482.1 vs. NCBI nr
Match: TVU13707.1 (hypothetical protein EJB05_37127, partial [Eragrostis curvula])

HSP 1 Score: 60.1 bits (144), Expect = 2.60e-08
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 57  LTDEDFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCGHFEAL 116
           L +E  VG   +DVGGVE+ DA   GVV++ DHVG+ L RAV  GHAHAA+      + L
Sbjct: 17  LAEEFLVGVGPIDVGGVEERDAGGGGVVDERDHVGLRLRRAVVSGHAHAAKAKGRDLKPL 76

Query: 117 RTEL 120
           R +L
Sbjct: 77  RAQL 80

BLAST of MELO.jh016482.1 vs. ExPASy TrEMBL
Match: A0A5J9TR41 (Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37107 PE=4 SV=1)

HSP 1 Score: 110 bits (276), Expect = 4.59e-26
Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESL--- 60
           +LV+E+DAVN ETL+ +LA  + + RV+ +L L +GE   +  G+  L+    L+SL   
Sbjct: 75  VLVVEVDAVNAETLEAALACRAYVRRVAADLALAVGEGEAELGGQLHLLPHPALQSLHMG 134

Query: 61  ------TDEDFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCG 120
                 +  D VG  AVDVGGVE+ DA  DGVV++ DHV +GLGRAVEGGH+HAAE L  
Sbjct: 135 ITWSIFSANDLVGVGAVDVGGVEEGDAGGDGVVDERDHVRLGLGRAVEGGHSHAAEALRR 194

Query: 121 HFEALRTELDSRNLRSHYEVAGGKE 136
             + LR +L +R+   H     G+E
Sbjct: 195 DLQTLRAKLHARH--GHRSCCHGRE 217

BLAST of MELO.jh016482.1 vs. ExPASy TrEMBL
Match: A0A5J9SX26 (Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_50864 PE=4 SV=1)

HSP 1 Score: 109 bits (273), Expect = 3.39e-25
Identity = 65/145 (44.83%), Postives = 90/145 (62.07%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESL--- 60
           +LV+E+DAVN ETL+ +LA  + + RV+ +L L +GE   +  G+  L+    L+SL   
Sbjct: 152 VLVVEVDAVNAETLEAALACRAYVRRVAADLALAVGEGEAELGGQLHLLPHLDLQSLHMG 211

Query: 61  ------TDEDFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCG 120
                 +  D VG  AVDVGGVE+ DA  DGVV++ DHV +GLGRAVEGGH+HAAE L  
Sbjct: 212 ITSSIFSANDLVGVGAVDVGGVEEGDAGGDGVVDERDHVRLGLGRAVEGGHSHAAEALRR 271

Query: 121 HFEALRTELDSRNLRSHYEVAGGKE 136
             + LR +L +R+   H     G+E
Sbjct: 272 DLQTLRAKLHARH--GHRSCCHGRE 294

BLAST of MELO.jh016482.1 vs. ExPASy TrEMBL
Match: A0A5J9TQR9 (Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37104 PE=4 SV=1)

HSP 1 Score: 104 bits (259), Expect = 4.65e-25
Identity = 63/167 (37.72%), Postives = 94/167 (56.29%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESL--- 60
           MLV+E+D V+ ET + +LA G++I RV+T+LPL + + + +  G+  L+    L+ L   
Sbjct: 1   MLVVEVDTVDAETPEAALARGAHIHRVTTDLPLAVDKNDTELGGQLHLLPHPALQRLLTD 60

Query: 61  ----------------------------TDEDFVGERAVDVGGVEKSDAAVDGVVNQSDH 120
                                        +ED VG  AVDVGGV++ DA  +GVVN+  H
Sbjct: 61  ITSNAFSANHKARGSNQSSTASGNKPYLAEEDLVGVGAVDVGGVKEGDAGGNGVVNERGH 120

Query: 121 VGVGLGRAVEGGHAHAAETLCGHFEALRTELDSRNLRSHYEVAGGKE 136
           +G+GLGRAV+GGHAHAAE L    +AL  +L +R++  H+    G+E
Sbjct: 121 LGLGLGRAVDGGHAHAAEALRRDLQALGAQLHARHI--HWSSGHGRE 165

BLAST of MELO.jh016482.1 vs. ExPASy TrEMBL
Match: A0A6S7AUI9 (Uncharacterized protein OS=Paraburkholderia ultramafica OX=1544867 GN=LMG28614_00643 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.38e-09
Identity = 41/120 (34.17%), Postives = 61/120 (50.83%), Query Frame = 0

Query: 1   MLVIEIDAVNIETLQTSLASGSNIGRVSTNLPLTIGETNCKFSGKFGLVSVAVLESLTDE 60
           ML  ++DA+  E L+      ++    +   PL +     +F G   LV+        D+
Sbjct: 1   MLAEQVDAIGFEALERRFGDHADALGTTVERPLRVAVLEAEFGGDHDLVAKR-RHRFADQ 60

Query: 61  DFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCGHFEALRTEL 120
             V ERAV +GGVE+SDA ++G +NQ D  G+  G AV     HAAE+  GHF+   T+ 
Sbjct: 61  FLVDERAVALGGVEESDALLEGGLNQFDARGLLGGLAVAEAQTHAAESDRGHFQPAVTQF 119

BLAST of MELO.jh016482.1 vs. ExPASy TrEMBL
Match: A0A5J9TR61 (Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37127 PE=4 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 1.26e-08
Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 0

Query: 57  LTDEDFVGERAVDVGGVEKSDAAVDGVVNQSDHVGVGLGRAVEGGHAHAAETLCGHFEAL 116
           L +E  VG   +DVGGVE+ DA   GVV++ DHVG+ L RAV  GHAHAA+      + L
Sbjct: 17  LAEEFLVGVGPIDVGGVEERDAGGGGVVDERDHVGLRLRRAVVSGHAHAAKAKGRDLKPL 76

Query: 117 RTEL 120
           R +L
Sbjct: 77  RAQL 80

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TVU13687.19.48e-2644.83hypothetical protein EJB05_37107, partial [Eragrostis curvula][more]
TVU03549.17.01e-2544.83hypothetical protein EJB05_50864, partial [Eragrostis curvula][more]
TVU13684.19.60e-2537.72hypothetical protein EJB05_37104, partial [Eragrostis curvula][more]
CAB3778538.11.32e-0834.17hypothetical protein LMG28614_00643 [Paraburkholderia ultramafica][more]
TVU13707.12.60e-0850.00hypothetical protein EJB05_37127, partial [Eragrostis curvula][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5J9TR414.59e-2644.83Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37107... [more]
A0A5J9SX263.39e-2544.83Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_50864... [more]
A0A5J9TQR94.65e-2537.72Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37104... [more]
A0A6S7AUI96.38e-0934.17Uncharacterized protein OS=Paraburkholderia ultramafica OX=1544867 GN=LMG28614_0... [more]
A0A5J9TR611.26e-0850.00Uncharacterized protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37127... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh016482.1.t1MELO.jh016482.1.t1mRNA