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MELO.jh016184.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonstart_codonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAGTTAGCTTACTTTCGCATGATTCATGGCTCAGACCTAGTCTGTCGCCAAAGTACGAGAATGGACCGAAGACGTTTCGCCATTCTCTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGTGCACGATGTGAAAAATCATGTCATTCAACGAAAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGGTACACATTTATCTCGAACTACGTACTTCCAACACAACGACGTTAGTTCTTCTCAATAATTCGTAGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTGACCGCGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACAGGAAAGGAGATTTCGTTTAC CAGTTAGCTTACTTTCGCATGATTCATGGCTCAGACCTAGTCTGTCGCCAAAGTACGAGAATGGACCGAAGACGTTTCGCCATTCTCTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGTGCACGATGTGAAAAATCATGTCATTCAACGAAAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTGACCGCGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACAGGAAAGGAGATTTCGTTTAC ATGATTCATGGCTCAGACCTAGTCTGTCGCCAAAGTACGAGAATGGACCGAAGACGTTTCGCCATTCTCTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGTGCACGATGTGAAAAATCATGTCATTCAACGAAAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTGACCGCGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACAGGAAAGGAGATTTCGTTTAC MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHVIQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY Homology
BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0061842.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15414.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 308 bits (789), Expect = 6.27e-105 Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 312 bits (799), Expect = 9.39e-104 Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 311 bits (798), Expect = 1.33e-103 Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 311 bits (796), Expect = 2.68e-103 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 311 bits (796), Expect = 2.68e-103 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7V0W7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00580 PE=4 SV=1) HSP 1 Score: 308 bits (789), Expect = 3.04e-105 Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1) HSP 1 Score: 312 bits (799), Expect = 4.55e-104 Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1) HSP 1 Score: 311 bits (798), Expect = 6.45e-104 Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1) HSP 1 Score: 311 bits (796), Expect = 1.30e-103 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1) HSP 1 Score: 311 bits (796), Expect = 1.30e-103 Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18 Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16 Identity = 52/155 (33.55%), Postives = 76/155 (49.03%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05 Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 0
BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05 Identity = 17/49 (34.69%), Postives = 31/49 (63.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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