MELO.jh016184.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh016184.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Retrotransposon protein
Location	chr07: 22910613 .. 22911177 (+)
RNA-Seq Expression	MELO.jh016184.1
Synteny	MELO.jh016184.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGTTAGCTTACTTTCGCATGATTCATGGCTCAGACCTAGTCTGTCGCCAAAGTACGAGAATGGACCGAAGACGTTTCGCCATTCTCTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGTGCACGATGTGAAAAATCATGTCATTCAACGAAAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGGTACACATTTATCTCGAACTACGTACTTCCAACACAACGACGTTAGTTCTTCTCAATAATTCGTAGTTATGCGTTGCAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTGACCGCGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACAGGAAAGGAGATTTCGTTTAC

mRNA sequence

CAGTTAGCTTACTTTCGCATGATTCATGGCTCAGACCTAGTCTGTCGCCAAAGTACGAGAATGGACCGAAGACGTTTCGCCATTCTCTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGTGCACGATGTGAAAAATCATGTCATTCAACGAAAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTGACCGCGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACAGGAAAGGAGATTTCGTTTAC

Coding sequence (CDS)

ATGATTCATGGCTCAGACCTAGTCTGTCGCCAAAGTACGAGAATGGACCGAAGACGTTTCGCCATTCTCTGTCACCTACTGAGGACCATTGCTGGACTAACGTCGACGGAAGTCGTCGATGTTGAGGAGATGGTAGCAATGTTCCTCCACATTCTTGTGCACGATGTGAAAAATCATGTCATTCAACGAAAGTTCATGCGGTCGGGTGAGACAATTTCCCGCCATTTCAACATGGTCTTGTTGGCCGTCATTCGACTTCATGAGGAGCTTTTGAAAAAACCACAACCAGTGCCTAATGAATGCACAGATCAAAGATGGAGGTGGTTTGAGAATTGCCTAGGTGCATTAGATGGAACGTACATAAAAGTCAACGTTCCAGCAAGTGACCGCGCTAGGTATAGAACACGCAAGGGGGAGGTGGCCACAAATGTACTTGGCGTGTGTGACAGGAAAGGAGATTTCGTTTAC

Protein sequence

MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHVIQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY

Homology

[Close]

BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0061842.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15414.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 308 bits (789), Expect = 6.27e-105
Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTST+VVDVEEMVAMFLHIL HDVKN V
Sbjct: 31  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTKVVDVEEMVAMFLHILAHDVKNRV 90

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRS ETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 91  IQREFMRSSETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 150

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 151 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 186

[Close]

BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0035620.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0041646.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0047363.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0048378.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 312 bits (799), Expect = 9.39e-104
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKN V
Sbjct: 53  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0051057.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (798), Expect = 1.33e-103
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVC QSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKN V
Sbjct: 53  MIHGSDLVCHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0048361.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (796), Expect = 2.68e-103
Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKN V
Sbjct: 53  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRW+WFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. NCBI nr
Match: KAA0046727.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0056032.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0059561.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0065497.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 311 bits (796), Expect = 2.68e-103
Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKN V
Sbjct: 53  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7V0W7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00580 PE=4 SV=1)

HSP 1 Score: 308 bits (789), Expect = 3.04e-105
Identity = 149/156 (95.51%), Postives = 151/156 (96.79%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTST+VVDVEEMVAMFLHIL HDVKN V
Sbjct: 31  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTKVVDVEEMVAMFLHILAHDVKNRV 90

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRS ETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 91  IQREFMRSSETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 150

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 151 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 186

[Close]

BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5D3BDX0 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1112G00360 PE=3 SV=1)

HSP 1 Score: 312 bits (799), Expect = 4.55e-104
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKN V
Sbjct: 53  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7U9H2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold678G00110 PE=3 SV=1)

HSP 1 Score: 311 bits (798), Expect = 6.45e-104
Identity = 151/156 (96.79%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVC QSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKN V
Sbjct: 53  MIHGSDLVCHQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7TXW1 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00370 PE=3 SV=1)

HSP 1 Score: 311 bits (796), Expect = 1.30e-103
Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKN V
Sbjct: 53  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLH+ELLKKPQPVPNECTDQRWRWFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHDELLKKPQPVPNECTDQRWRWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL
Match: A0A5A7U476 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00800 PE=3 SV=1)

HSP 1 Score: 311 bits (796), Expect = 1.30e-103
Identity = 150/156 (96.15%), Postives = 152/156 (97.44%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           MIHGSDLVCRQSTRMDRR FAILCHLLRTIAGLTSTEVVDVEEMVAMFLHIL HDVKN V
Sbjct: 53  MIHGSDLVCRQSTRMDRRCFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILAHDVKNRV 112

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWRWFENCLGALDGTY 120
           IQR+FMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRW+WFENCLGALDGTY
Sbjct: 113 IQREFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECTDQRWKWFENCLGALDGTY 172

Query: 121 IKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 156
           IKVNVPASDRARYRTRKGEVATNVLGVCD KGDFVY
Sbjct: 173 IKVNVPASDRARYRTRKGEVATNVLGVCDTKGDFVY 208

[Close]

BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 90.1 bits (222), Expect = 1.7e-18
Identity = 52/146 (35.62%), Postives = 83/146 (56.85%), Query Frame = 0


Query: 1   MIHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHV 60
           +++G +  C ++ RMD+  F  LC LL+T   L  T  + +E  +A+FL I+ H+++   
Sbjct: 34  ILNGPNEQCFENFRMDKPVFYKLCDLLQTRGLLRHTNRIKIEAQLAIFLFIIGHNLRTRA 93

Query: 61  IQRKFMRSGETISRHFNMVLLAVIRLHEELLKKPQPVPNECT-DQRWRWFENCLGALDGT 120
           +Q  F  SGETISRHFN VL AVI + ++     QP  N  T +    +F++C+G +D  
Sbjct: 94  VQELFCYSGETISRHFNNVLNAVIAISKDFF---QPNSNSDTLENDDPYFKDCVGVVDSF 153

Query: 121 YIKVNVPASDRARYRTRKGEVATNVL 146
           +I V V   ++  +R   G +  NVL
Sbjct: 154 HIPVMVGVDEQGPFRNGNGLLTQNVL 176

[Close]

BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 82.4 bits (202), Expect = 3.5e-16
Identity = 52/155 (33.55%), Postives = 76/155 (49.03%), Query Frame = 0


Query: 9   CRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHVIQRKFMRS 68
           C Q  RM    F  LC++L+T   L  T  + +EE VAMFL I  H+     +  +F R+
Sbjct: 66  CLQLLRMSLPCFTTLCNMLQTNYDLQPTLNISIEESVAMFLRICGHNEVYRDVGLRFGRN 125

Query: 69  GETISRHFNMVLLAVIRLHEELLKKP-----QPVPNEC-TDQR-WRWFENCLGALDGTYI 128
            ET+ R F  VL A   L  + ++ P       +P     DQR W +F   +GA+DGT++
Sbjct: 126 QETVQRKFREVLTATELLACDYIRTPTRQELYRIPERLQVDQRYWPYFSGFVGAMDGTHV 185

Query: 129 KVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 157
            V V    +  Y  R    + N++ +CD K  F Y
Sbjct: 186 CVKVKPDLQGMYWNRHDNASLNIMAICDLKMLFTY 220

[Close]

BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 1.2e-05
Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 0


Query: 2   IHGSDLVCRQSTRMDRRRFAILCHLLRTIAGLTSTEVVDVEEMVAMFLHILVHDVKNHVI 61
           I+ +++ C+   RM    F  LC +L    GL S+  + ++E VA+FL I   +     I
Sbjct: 17  IYSNEVSCQTLIRMSSEAFTQLCEILHGKYGLQSSTNISLDESVAIFLIICASNDTQRDI 76

Query: 62  QRKFMRSGETISRHFNMVLLAVIRLHEELLK 93
             +F  + ETI R F+ VL A+ RL  E ++
Sbjct: 77  ALRFGHAQETIWRKFHDVLKAMERLAVEYIR 107

[Close]

BLAST of MELO.jh016184.1 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 2.8e-05
Identity = 17/49 (34.69%), Postives = 31/49 (63.27%), Query Frame = 0


Query: 108 WFENCLGALDGTYIKVNVPASDRARYRTRKGEVATNVLGVCDRKGDFVY 157
           +F++C+GA+D T+I   V       +R RKG+++ N+L  C+   +F+Y
Sbjct: 21  YFKDCVGAIDDTHIFAMVSQKKMPSFRNRKGDISQNMLAACNFDVEFMY 69

The following BLAST results are available for this feature:

BLAST of MELO.jh016184.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0061842.1	6.27e-105	95.51	retrotransposon protein [Cucumis melo var. makuwa] >TYK15414.1 retrotransposon p...	[more]
KAA0035620.1	9.39e-104	96.79	retrotransposon protein [Cucumis melo var. makuwa] >KAA0038121.1 retrotransposon...	[more]
KAA0051057.1	1.33e-103	96.79	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0048361.1	2.68e-103	96.15	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0046727.1	2.68e-103	96.15	retrotransposon protein [Cucumis melo var. makuwa] >KAA0052100.1 retrotransposon...	[more]

BLAST of MELO.jh016184.1 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MELO.jh016184.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7V0W7	3.04e-105	95.51	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5D3BDX0	4.55e-104	96.79	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U9H2	6.45e-104	96.79	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7TXW1	1.30e-103	96.15	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7U476	1.30e-103	96.15	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of MELO.jh016184.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G41980.1	1.7e-18	35.62	CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (Int...	[more]
AT1G43722.1	3.5e-16	33.55	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28730.1	1.2e-05	32.97	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G28950.1	2.8e-05	34.69	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22930	UNCHARACTERIZED	coord: 1..155
None	No IPR available	PANTHER	PTHR22930:SF216	OS11G0577650 PROTEIN	coord: 1..155

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh016184.1.t1	MELO.jh016184.1.t1	mRNA