MELO.jh016093.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh016093.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 22009145 .. 22010314 (-)
RNA-Seq ExpressionMELO.jh016093.1
SyntenyMELO.jh016093.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
TAACACTACAAGAAAATGGAGCATTCCCGACACCGAAAAGGACATCGGCATAAAGAACGTCGGAAATAAGGGCTTTCCCGACGCCATCAACACCGCGTCGAGAGAAGCGTCGGGAAAACACTCTTTCCCGACGCATCACGAAGGCGTCGGCAAGTATTCGTCAGGAAAAGGGTAAATTAATTTTAAAAAACGAACTATTTCCAACGCCGTGCACAGTGCGTCGGGAGCGGCATCGGGAATAGGGGTTTTTCCGACGCAGCCTTAAGCGTCAGGAAAATCGTTTAATGAGCGTCGGGAATTCCCCTTTTCCGGCTTGGGATTTCCGCATGCGTCGGAAAATCCCTTTTTAATTGTTTCATTTGTATTTTAGAACCAAACGAGAGGAAAAGAGAGAGAAGCCGAGAGTCGTCGCGTTTGTCGCCCTTCGCGTTGTTCGCCGTCCTCGCCGCGTCGCCACTTTAGGTAAGTGGAAAATTAAAATTTATTTAGTTTAAATTTATGTTTTAGGGTTTTTTTTTAGGAAAATAATTTTAGGATTTTCTTTTGGAATAGATTTTTGTTTGTTAAATGTATTTTTGTATAGAATGTGTGTAATTTGTGGTTGAATTGAAATTTGAATGGTTTAGGGTTTAGGGTTATTTAGAAAATTGAATTGAGGGGAGAGTTTATAGTTAAACGAAAATTGAATGGGGGTTGAATTGGGGGAGGGGATTTATTGTTAAATTGAAAATTGAATTGAGAGGTGGGTTTATATTTGAATTGAAAATTGAAATTGGGGGAGGGGTTAATAGTTAAATTGAATTTGGGGGCGAGAGAGATTTGATTAAATTGAAAATTCAATTGGGGAGAGGAGATTTATAGTTGAATTGAAAATTGAAATTGGAGAGGAGGGGGAGGGGGTTAATAGTTAAATTGAATTGGGGGGGCGGTGGGGATTTATAGTTTATGTTTTGAATGTAATATGTGTGTTAAGATTTGTTTTGGCTATCCTGCAGTTATGGTATCCTGCAGTTGAAAGAGAATGAATTACGAGCTAAACTTCATGAAGCTTTGGGACAGATTAAAGTACAAGATAGAAATCACCAAGTATTAGCTTCACAAATGGAAAGTATGAAAAAGATGATAGAAGAACTGACTCATGCACAACAGGGACCACCACATGATCCCTAG

mRNA sequence

TAACACTACAAGAAAATGGAGCATTCCCGACACCGAAAAGGACATCGGCATAAAGAACGTCGGAAATAAGGGCTTTCCCGACGCCATCAACACCGCGTCGAGAGAAGCGTCGGGAAAACACTCTTTCCCGACGCATCACGAAGGCGTCGGCAAGTATTCGTCAGGAAAAGGTGCGTCGGGAGCGGCATCGGGAATAGGGGTTTTTCCGACGCAGCCTTAAGCGTCAGGAAAATCGTTTAATGAGCGTCGGGAATTCCCCTTTTCCGGCTTGGGATTTCCGCATGCGTCGGAAAATCCCTTTTTAATTGTTTCATTTGTATTTTAGAACCAAACGAGAGGAAAAGAGAGAGAAGCCGAGAGTCGTCGCGTTTGTCGCCCTTCGCGTTGTTCGCCGTCCTCGCCGCGTCGCCACTTTAGTTATGGTATCCTGCAGTTGAAAGAGAATGAATTACGAGCTAAACTTCATGAAGCTTTGGGACAGATTAAAGTACAAGATAGAAATCACCAAGTATTAGCTTCACAAATGGAAAGTATGAAAAAGATGATAGAAGAACTGACTCATGCACAACAGGGACCACCACATGATCCCTAG

Coding sequence (CDS)

ATGAATTACGAGCTAAACTTCATGAAGCTTTGGGACAGATTAAAGTACAAGATAGAAATCACCAAGTATTAG

Protein sequence

MNYELNFMKLWDRLKYKIEITKY
Homology
[Close]
BLAST of MELO.jh016093.1 vs. NCBI nr
Match: TYK23904.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 46.2 bits (108), Expect = 6.61e-05
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 1   MNYELNFMKLWDRLKYKIEITKY 23
           +NY+LNFMKLW+RLKYKIEITK+
Sbjct: 102 LNYKLNFMKLWNRLKYKIEITKH 124

[Close]
BLAST of MELO.jh016093.1 vs. NCBI nr
Match: KAA0041171.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 46.2 bits (108), Expect = 1.10e-04
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 1   MNYELNFMKLWDRLKYKIEITKY 23
           +NY+LNFMKLW+RLKYKIEITK+
Sbjct: 138 LNYKLNFMKLWNRLKYKIEITKH 160

[Close]
BLAST of MELO.jh016093.1 vs. NCBI nr
Match: TYK28852.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 46.2 bits (108), Expect = 1.96e-04
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 1   MNYELNFMKLWDRLKYKIEITKY 23
           +NY+LNFMKLW+RLKYKIEITK+
Sbjct: 241 LNYKLNFMKLWNRLKYKIEITKH 263

[Close]
BLAST of MELO.jh016093.1 vs. NCBI nr
Match: KAA0037656.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 43.9 bits (102), Expect = 2.92e-04
Identity = 18/23 (78.26%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 1  MNYELNFMKLWDRLKYKIEITKY 23
          +NY+LNF KLW+RLKYKIEITK+
Sbjct: 70 LNYKLNFKKLWNRLKYKIEITKH 92

[Close]
BLAST of MELO.jh016093.1 vs. NCBI nr
Match: TYK02447.1 (NBS-LRR type resistance protein [Cucumis melo var. makuwa])

HSP 1 Score: 43.5 bits (101), Expect = 4.13e-04
Identity = 18/23 (78.26%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 1  MNYELNFMKLWDRLKYKIEITKY 23
          +NY+LNFMKLW+ LKYKIEITK+
Sbjct: 70 LNYKLNFMKLWNGLKYKIEITKH 92

[Close]
BLAST of MELO.jh016093.1 vs. ExPASy TrEMBL
Match: A0A5D3DJZ6 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold61820G00010 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 3.20e-05
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 1   MNYELNFMKLWDRLKYKIEITKY 23
           +NY+LNFMKLW+RLKYKIEITK+
Sbjct: 102 LNYKLNFMKLWNRLKYKIEITKH 124

[Close]
BLAST of MELO.jh016093.1 vs. ExPASy TrEMBL
Match: A0A5A7THM2 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold128G001050 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 5.31e-05
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 1   MNYELNFMKLWDRLKYKIEITKY 23
           +NY+LNFMKLW+RLKYKIEITK+
Sbjct: 138 LNYKLNFMKLWNRLKYKIEITKH 160

[Close]
BLAST of MELO.jh016093.1 vs. ExPASy TrEMBL
Match: A0A5D3DZ15 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00610 PE=4 SV=1)

HSP 1 Score: 46.2 bits (108), Expect = 9.50e-05
Identity = 19/23 (82.61%), Postives = 23/23 (100.00%), Query Frame = 0 

Query: 1   MNYELNFMKLWDRLKYKIEITKY 23
           +NY+LNFMKLW+RLKYKIEITK+
Sbjct: 241 LNYKLNFMKLWNRLKYKIEITKH 263

[Close]
BLAST of MELO.jh016093.1 vs. ExPASy TrEMBL
Match: A0A5A7T670 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G003190 PE=4 SV=1)

HSP 1 Score: 43.9 bits (102), Expect = 1.41e-04
Identity = 18/23 (78.26%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 1  MNYELNFMKLWDRLKYKIEITKY 23
          +NY+LNF KLW+RLKYKIEITK+
Sbjct: 70 LNYKLNFKKLWNRLKYKIEITKH 92

[Close]
BLAST of MELO.jh016093.1 vs. ExPASy TrEMBL
Match: A0A5D3BSP0 (NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1738G00560 PE=4 SV=1)

HSP 1 Score: 43.5 bits (101), Expect = 2.00e-04
Identity = 18/23 (78.26%), Postives = 22/23 (95.65%), Query Frame = 0 

Query: 1  MNYELNFMKLWDRLKYKIEITKY 23
          +NY+LNFMKLW+ LKYKIEITK+
Sbjct: 70 LNYKLNFMKLWNGLKYKIEITKH 92

The following BLAST results are available for this feature:
BLAST of MELO.jh016093.1 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK23904.16.61e-0582.61NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0041171.11.10e-0482.61NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
TYK28852.11.96e-0482.61NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
KAA0037656.12.92e-0478.26NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
TYK02447.14.13e-0478.26NBS-LRR type resistance protein [Cucumis melo var. makuwa][more]
BLAST of MELO.jh016093.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh016093.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3DJZ63.20e-0582.61NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7THM25.31e-0582.61NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3DZ159.50e-0582.61NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A5A7T6701.41e-0478.26NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_... [more]
A0A5D3BSP02.00e-0478.26NBS-LRR type resistance protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
BLAST of MELO.jh016093.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh016093.1.t1MELO.jh016093.1.t1mRNA