MELO.jh015520.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh015520.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr07: 10540670 .. 10542564 (-)
RNA-Seq ExpressionMELO.jh015520.1
SyntenyMELO.jh015520.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSstart_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAAAAACTCTTCAGGTGCCGAAAAGATAACCACTAAAACCGAAAACGACGCTGACAACATTAAAGATTCTGAACGTGTAAGCATGTGCCTTCCTTTTAGCTAGTCATAGAGTTAATAACGACAAACTCTTAAGCCAGTACGTAAATGCTCAAACGAATTTGCATCTAGTGGCTTAGTGAAGATATCTGCTAATTGTACATTCGATCGAATATGATCAAGTTTAATAATTTTATTTTCAACATGTTCTCCGATAAAATGATGCCTAATATCAATATGTTTGGTTCGACTATGTTGAACCAGATCTTTTGATATATCAATGGCACTTATATTATCATAATATAAAGTCATGATATCTTGTGTGAACCCATACTCATGCAACATATTCTTCATTCAGATCAACTATGTACAAGCAGTCCCTGCTGCTATGTACTCAACTTCAGCTGTAGACAAAGAAACACAATTTTTTTTCTTACTGAACCAAGAGATAAGATTTTTCTCTAGAAAGAAACAACCTCCAAAGGTGCTCTTCCTATCATCAGAAGAACCTACCCAATCAGCATCACAATATCCAACCAAAGTAGAAGTCGTGTCATAGGAATACATAATTCCAAAGTCACTTGTCCCATGAACATACTTGAGAATCCGTTTAACAGCCTCTAAATGTGATGTTCGGGGATCAACCTGATAACGGGCACATTTTCCAACAGTATAAGCTATGTTAGGTCGACTGGCAGTTAAATACAATAGGCTACCGATTATACCTCTGTAAAGTTTGTGATTTGCTCTTGCACCTTCAGTATCTTTAGTAATTTTAACATGTGTCGCAGCTAGAGTCCTCTTGTGACGAGATTGTTCTAATCCAAACTTTTTAATTATACTCTTGGCATACTTTTCTTGTGATATGAATATACCTTCACTCTTTTGCTTAATTTGAAGTCCTAGAAAACATCAGAGTTCTCCAACCATGCTCATCTCAAATTCTGACTTCATGATATCTATGAAGTTAGTAACAAGATCTTGAGGAAAACCTCCAAATATAATATCATCAACATAGATTTGAGCAACTATGAGTTGATTAGTTGTTCTGTGAATAAATAGAGTTTTGTCAGCTTCACCTCTAGAGTACCCTTTACAACTTAAATAAATCGTCAATTGTTCATACCAAGCTCTAGGAGCTTGCTTAAGCCCATATAGAGCTTTATTAAGCTTATACACATGTTGAGGATGTTCAGAATCGACAAAACCCTTGGGTTGAGCAACATAGACTTCTTCATTTAAGTATCCGTTCAAGAAGGCATTTTTTACACCCATTTGATACAATTTAAATTTTTTAATACAAGATATTCCGAGTAACAAGTGAATAGCTTCAAGCTTGGCAAGAGGTGCGAATGTTTCATCAAAGTCAACCCCCTCGACCTGAGCATAACCTTGAGCCACTAAACGAGCTTTGTTCTTGGTCACACATCCGACTTCATCAATTTTATTTTTTAAGATCCATTTAGTATCTATAATATTTTCTCTTTCAGGTTTAGGAACCAATGTCTAGACATTGTTTCTCATGAATTGGAGTAGTTCTTCTTGCATTACGTTAATCCAATATTCATCTTTAAGAGCAACGTCAATAGTTGAGGGTTTGATGGCAAATGTATAACATAAGTCAGCAATCATCTTCAAGTAATCTACTTTCTCTTTCTTTTGAGTGATAATTCCAGCTGGAGGATCACCTATTATAGAACTTGATGGATGATTCTTCTTCACATGTGCAAAAGGAACAAACTCAAGATTATCAGCTATAACTTCCTTAGATATCTTTTCTGAGTTTATACCAGAACCATCTATTAAAGCATCAGCTTTAGGTACCTCCACAGAACACAGTGAATTATCCACAGG

mRNA sequence

ATGAAAAAAAACTCTTCAGGTGCCGAAAAGATAACCACTAAAACCGAAAACGACGCTGACAACATTAAAGATTCTGAACGTATCAACTATGTACAAGCAGTCCCTGCTGCTATGTACTCAACTTCAGCTGTAGACAAAGAAACACAATTTTTTTTCTTACTGAACCAAGAGATAAGATTTTTCTCTAGAAAGAAACAACCTCCAAAGGTGCTCTTCCTATCATCAGAAGAACCTACCCAATCAGCATCACAATATCCAACCAAAGTACCTCCACAGAACACAGTGAATTATCCACAGG

Coding sequence (CDS)

ATGAAAAAAAACTCTTCAGGTGCCGAAAAGATAACCACTAAAACCGAAAACGACGCTGACAACATTAAAGATTCTGAACGTATCAACTATGTACAAGCAGTCCCTGCTGCTATGTACTCAACTTCAGCTGTAGACAAAGAAACACAATTTTTTTTCTTACTGAACCAAGAGATAAGATTTTTCTCTAGAAAGAAACAACCTCCAAAGGTGCTCTTCCTATCATCAGAAGAACCTACCCAATCAGCATCACAATATCCAACCAAAGTACCTCCACAGAACACAGTGAATTATCCACAG

Protein sequence

MKKNSSGAEKITTKTENDADNIKDSERINYVQAVPAAMYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPTKVPPQNTVNYPQ
Homology
[Close]
BLAST of MELO.jh015520.1 vs. NCBI nr
Match: PNX68843.1 (hypothetical protein L195_g064165, partial [Trifolium pratense])

HSP 1 Score: 77.0 bits (188), Expect = 2.12e-16
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 38 MYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPTK 88
          MYS SAVD++T FFFLLN EIR   +KKQPP+VLFLSS  P QSASQYPTK
Sbjct: 1  MYSASAVDRDTPFFFLLNHEIRLSPKKKQPPEVLFLSSALPAQSASQYPTK 51

[Close]
BLAST of MELO.jh015520.1 vs. NCBI nr
Match: PNX59796.1 (hypothetical protein L195_g059865, partial [Trifolium pratense])

HSP 1 Score: 76.3 bits (186), Expect = 4.81e-16
Identity = 40/52 (76.92%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 38 MYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPTKV 89
          MYS SAVD++TQF FLLN EIR   RKKQ P VLFLSS  PTQSASQYPTKV
Sbjct: 1  MYSASAVDRDTQFCFLLNHEIRLSPRKKQLPDVLFLSSALPTQSASQYPTKV 52

[Close]
BLAST of MELO.jh015520.1 vs. NCBI nr
Match: MCI57346.1 (hypothetical protein [Trifolium medium])

HSP 1 Score: 75.1 bits (183), Expect = 1.38e-15
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 38 MYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPTKVPP 91
          MYS SAVD++TQF FLLNQ+IR  SRKKQPP+VLFL S  P+Q+ASQYP  V P
Sbjct: 1  MYSDSAVDRDTQFCFLLNQDIRLLSRKKQPPEVLFLPSALPSQTASQYPFIVEP 54

[Close]
BLAST of MELO.jh015520.1 vs. NCBI nr
Match: XP_031124312.1 (uncharacterized protein LOC116027022 [Ipomoea triloba])

HSP 1 Score: 61.6 bits (148), Expect = 1.86e-08
Identity = 30/56 (53.57%), Postives = 37/56 (66.07%), Query Frame = 0 

Query: 17  NDADNIKDSERINYVQAVPAAMYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLF 72
           ND  N+      + VQ +P A+YSTS VD + +F+FLLNQE RFF  KK PP VLF
Sbjct: 616 NDIGNVSVHHVRSCVQQLPVAIYSTSMVDNDIEFYFLLNQETRFFPMKKHPPDVLF 671

[Close]
BLAST of MELO.jh015520.1 vs. NCBI nr
Match: PKU84544.1 (hypothetical protein MA16_Dca020008 [Dendrobium catenatum])

HSP 1 Score: 49.7 bits (117), Expect = 4.50e-05
Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 0 

Query: 34 VPAAMYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYP 86
          +P A+YS SAV+  T+F FLL+QE        Q P+VLFLS   P +S S+YP
Sbjct: 26 LPTAIYSASAVESATEFCFLLDQETNDCPMNWQVPEVLFLSILHPAKSESEYP 78

[Close]
BLAST of MELO.jh015520.1 vs. ExPASy TrEMBL
Match: A0A2K3KRF2 (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g064165 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.03e-16
Identity = 38/51 (74.51%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 38 MYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPTK 88
          MYS SAVD++T FFFLLN EIR   +KKQPP+VLFLSS  P QSASQYPTK
Sbjct: 1  MYSASAVDRDTPFFFLLNHEIRLSPKKKQPPEVLFLSSALPAQSASQYPTK 51

[Close]
BLAST of MELO.jh015520.1 vs. ExPASy TrEMBL
Match: A0A2K3K0L3 (Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g059865 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 2.33e-16
Identity = 40/52 (76.92%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 38 MYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPTKV 89
          MYS SAVD++TQF FLLN EIR   RKKQ P VLFLSS  PTQSASQYPTKV
Sbjct: 1  MYSASAVDRDTQFCFLLNHEIRLSPRKKQLPDVLFLSSALPTQSASQYPTKV 52

[Close]
BLAST of MELO.jh015520.1 vs. ExPASy TrEMBL
Match: A0A392TB46 (Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 6.66e-16
Identity = 38/54 (70.37%), Postives = 44/54 (81.48%), Query Frame = 0 

Query: 38 MYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPTKVPP 91
          MYS SAVD++TQF FLLNQ+IR  SRKKQPP+VLFL S  P+Q+ASQYP  V P
Sbjct: 1  MYSDSAVDRDTQFCFLLNQDIRLLSRKKQPPEVLFLPSALPSQTASQYPFIVEP 54

[Close]
BLAST of MELO.jh015520.1 vs. ExPASy TrEMBL
Match: A0A2I0X9H4 (Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca020008 PE=4 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.18e-05
Identity = 26/53 (49.06%), Postives = 34/53 (64.15%), Query Frame = 0 

Query: 34 VPAAMYSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYP 86
          +P A+YS SAV+  T+F FLL+QE        Q P+VLFLS   P +S S+YP
Sbjct: 26 LPTAIYSASAVESATEFCFLLDQETNDCPMNWQVPEVLFLSILHPAKSESEYP 78

[Close]
BLAST of MELO.jh015520.1 vs. ExPASy TrEMBL
Match: A0A0S3R3D9 (Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis OX=157739 GN=Vigan.01G299200 PE=4 SV=1)

HSP 1 Score: 46.6 bits (109), Expect = 2.15e-04
Identity = 27/49 (55.10%), Postives = 31/49 (63.27%), Query Frame = 0 

Query: 39 YSTSAVDKETQFFFLLNQEIRFFSRKKQPPKVLFLSSEEPTQSASQYPT 87
          YS SA+D  T   FLL Q+IRF   + Q P V  LS  EP QSASQYP+
Sbjct: 38 YSASALDLATTLCFLLFQDIRFPPSRTQYPVVDLLSIGEPAQSASQYPS 86

The following BLAST results are available for this feature:
BLAST of MELO.jh015520.1 vs. NCBI nr
Match NameE-valueIdentityDescription
PNX68843.12.12e-1674.51hypothetical protein L195_g064165, partial [Trifolium pratense][more]
PNX59796.14.81e-1676.92hypothetical protein L195_g059865, partial [Trifolium pratense][more]
MCI57346.11.38e-1570.37hypothetical protein [Trifolium medium][more]
XP_031124312.11.86e-0853.57uncharacterized protein LOC116027022 [Ipomoea triloba][more]
PKU84544.14.50e-0549.06hypothetical protein MA16_Dca020008 [Dendrobium catenatum][more]
BLAST of MELO.jh015520.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh015520.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A2K3KRF21.03e-1674.51Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g06416... [more]
A0A2K3K0L32.33e-1676.92Uncharacterized protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g05986... [more]
A0A392TB466.66e-1670.37Uncharacterized protein (Fragment) OS=Trifolium medium OX=97028 PE=4 SV=1[more]
A0A2I0X9H42.18e-0549.06Uncharacterized protein OS=Dendrobium catenatum OX=906689 GN=MA16_Dca020008 PE=4... [more]
A0A0S3R3D92.15e-0455.10Uncharacterized protein (Fragment) OS=Vigna angularis var. angularis OX=157739 G... [more]
BLAST of MELO.jh015520.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 75..99
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..21

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh015520.1.t1MELO.jh015520.1.t1mRNA