MELO.jh014215.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDSstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.TGTAGCGCTAGCAGTAGCATAAGTATTTGTGAAAAGTGCAAAGTGTTGGTTGTTTCCACCACCCACTTGACCTATCTTAGATTTCAGCAGCTCCAACCTCCATTTATCCACACTTTTCTCTCTATTTTGATACATATTGTGCAATCAAACATCACCCCATTGCTCGACATGTCAAGAGTAGGCTAAGGTACTTTTAGTTTGGATTTGTAGTAATCCCCTTTAAATTCATTACATTTTACTGAGATTTGAATGAATTTCATGTATTGATCGTTCTAATTTTGTTGTTAATGATTATATTCATATTGTCATACGCACTAGGACTTATGCTGAATGCAATTTTCTTTTTAATTGTACGTAATTCAATTAAAAGTGATGAGTTAAGTTAGCTTACGAAATCAATTCAATCTTGTATTGTTCTAACCGACTTAGGTTTGGACTAGATGATTGTCTAATTAAGTGCATGAAAATAAGGTTGTAACTCCGAGGCCTAGGATTCGGATTGGATCTCCGACAATCTCCTACATTCCCTACAATTTGATAATATCATTCTTACTTATCTTAAATGCTTATTAGAGTGAACGTTATATCATTCTTATTTGTCTTAAAGACTTATTAGAGGGAAAATTGTAGCTACAAACTAACACGAATGCTTTCAGCATGCTTTGTCCTCACTCACATGCATCATAGAAAAATTCCTAAGAGGTTACCCAATATAGAATTGTTCCAAACTAACCATGCTTAACTTTGGAGTTCCTATGATTGAGCCGTCGAAAAGGATAGTAACTTTTAATTCTTTTAAGTCTTTCTTAACCTTATTTTCATGTTCCCAAGACCCTTCTCATTCAGATGTGATATCAGTTCATTCATGTTCCTCTCTTAAATTCGAGGCATTACAAAGACTCTCAACCTAACTTAGCCTTCATCGTAATGCAATTAACGCGAATTTAATCTTGCATGCTTTTCATCGATACAAACTAGTTTAATGCCTAGATAATTTGATTGACTTTTTTTTTTAATTAAATTGGTTAGAAGTACCAATTGTTAGATTCAGTAATGAAAATTCGATGATCAAATATAATGATTAGGGGTCTTATAAACTGAATTTAAACTTTCTTGAATCGATTTACATCTCTAGTTACTTTTCTTGCAATATGTACATTATTTGCAAACTAAAACCAACTTCAATCCATCCATCAGTTGCCCTCGGGTTGGAAATTGTTTACCTGAGAAATTGTCTGTGTTCCTTGTATTCGACCAAAACTTAATCACACCATTACGTAATGTGCTCTTTTCTTTCCTACATTCGTATATGGACTTTTGTGTTTTTTATTTCTTTGTTACTACATTCATGTTTTGTATATTATGATTGTGTTATATTTGTCAAATTATTTAGTTTAACTTTTGAGAATACTGTGAAATTTAATTTGTAATATTATCTTTTCCTTTTTAAGTTAATTTATATTGTTCATTTGTTATGATAAAATATAAGGGTTACACATGTTTTTTTATAAATAAAAAAGTCACTTGAAACTTCTGTTTGTAAACACTAATAATTCTGATTTTTTTTTTTATAGAAACAAATGGGATGAGTATTACTTTTTCTTAAACTGAACAAATGGTTGATGCAATATTGGCTAGTTATATAAAGATTTATACAAAATTGAATTTTAAAAATGATTGGCTTTAACCTATTTTAAAAAATAAAAAATATTTAATTTTAGAAAACTGATATGTCATAAAAAAAGATTGAAGAAGAAAGTAAATTTATTACTGTAATTTTTGTAAATGAAAGGTAAATTAACAACTTATTATTAACTTCTAAAACGTTGGTAAATTTGTAACAAAACAATATGTTAAAACTTTTGTTTGTAAATTATTAAAAAAAGATAATCTACAAGTTTTTTTTTCTTTTTTTTAAAGATATCATTGTCTTTTTTAAAATCAAAACTAAATAAAAAAAATTGTTTTACTTCATAACTAAATTAAGTTACATAAATTGAGAAAACGAAAACAATTTCTTAAAACTTTTGTTTTTAAGAAAATAATCGTAAAATAAGATAATCTAGTATCTTTTAAAGCAATTCTAAATTAAAATTAAGTAAATCTCACAATTTTTTTTAAAAGACATCATTGTCCTTATTTTTAAAATCAAAACTAAGTCAAGAAAATTTTCAAACTTCATAGCTAAATTATATAGATAATGAGTTACATAATTAAAAAGCAAAAATAATTATTTAAATTTTTTTAAGAAAATAAATTGTAAAGATAATGCTAAATTAAAATCAATTAAGACATAATTGTCTTTTCTAAAATTAAAACTAAATCAAGAAAAATTTTAAACTTCATAACGAAATTAGATAGAACAAAGAGTTACATAATTAAAAAAAAAAAAAGCAATTACATAGAACAAAGAGTTACATAATTAAAAAAAAAAAAGCAAAAACAATTTTTTAAAACTTTTGTTTTGAAGAAAAAAATTGTAAAAGAAGATAATCTTGTATTCTTTTTAAAAAGGAATGCTAAATTAAAATCAAGTAAGTCTCACAATTTTGTTTACATAATTAAAAAAAAAAAAACAAAAAAACCTCGTGTGCTAGGAACTCAATTGTGTTTGTTTTGTCAGGAACTTATCGTTAATTAAAGTACTAAAATAGCATGGACATAGAACCAAACGAGTCGATTGCAATACTTACTGTCATTTGCACAACACAACAACAATGGATGCTAATGTTCAATATGATAATGAGACCTGGAGACAGAAGAATAGAAAACAAATCATCAAACCTAAGATACCAAATTAGGCAACTTAACTTTTTTCGTCTAATTCATGAAAGTGATATAGCTTGTCGAGAGAGTACACGGATGGATCGAAGATGTTTTACTATCTTGTGTACTATGTTAAGAACAAAAGGGGGATTGGAAGCCACTCAATATGTGGATGTTGAAGAGATGATTGCGATTTTTTTGCATATTGTAGCACACGATGTTAAGAATAGGGTAACTCGACGACATTTTGCAAGGTCTGGTGAAACAGTGTCAAGACACTTCAATGCTGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGACCTATTCATGTTCGCATGAGAAGTGGCGATGGTTTCAGGTATATAATCGGCCCGCCACTACTTTACCACATATTTGCTTCTGTGAATTGACGAATAAAATGTCTTTTGCCCCTTGACAGAAATGTCTAGGTGCATTAGATGGTACACACATCAAAGTGAATGTAAGTATGAGTGATCGCCCAAGGTATAGGTCTAGAAAGGGTGACATTACCACAAATGTACTTGGTGTGTGTTTGCAAAATGGTGAGTTCATATTTGTCATGCCTGGATGGGAAGGGTCTGCATCTGATTCGAGAGTACTTAGAGATGCAGTGTCACGACTTACTGGTCTAAAAGTCCCAAAGGGTAAGATGATGCATTCTCTTCTCCCCACACAGTGGTGTTATACCATATGCTCATTTAATATGGATTACCCTAATAATTCATTATGAGTGCAACATGGGCAGGTTACTACTACTTGTGTGATGCTGGTTATCCAAATGCTGAAGGATTCCTCGCTCCATACCGAGGTCAACGTTACCATCTAACTGAATGGCGTGGAGGAAACCCACCAAAATGCCCGAAAGAGCTATTTAACATGAGGCATTCCTTTGCTAGAAACGTTATTGAAAGGGCATTTGGATCATTGAATTGTCGGTGGACCATTCTACAAGGGAGATCCTATTACCTCGTTGACATACAATGTAAAATAATAACAGCATGTTGCCTCTTACATAACTTGATACATAGAGAAATGGGTTCAGAGGCAACATTTAAAGAGCCACATCTTGGTGAAGGTGATTCAAGTGAGATGAACATTGAGAATATAAACTTCGTGGAAACAACTAATGTCTGGACTGAATGGAGGGATAATCTTGCAAACCAAATGTTTGAGGATTGGAATAATGTATGACTAATATATGTAGTTTAGTTTCCTATATAATTTTGTTTTATCACATGATCTGTACTTGAACTATATTTTTTTTGTGTAATTGAAGTCAGAAATACATAGGGTTTCCTCTAAATTATGAGAA TGTAGCGCTAGCAGTAGCATAAGTATTTGTGAAAAGTGCAAAGTGTTGGTTGTTTCCACCACCCACTTGACCTATCTTAGATTTCAGCAGCTCCAACCTCCATTTATCCACACTTTTCTCTCTATTTTGATACATATTGTGCAATCAAACATCACCCCATTGCTCGACATGTCAAGAGTAGGCTAAGCACACGATGTTAAGAATAGGGTAACTCGACGACATTTTGCAAGGTCTGGTGAAACAGTGTCAAGACACTTCAATGCTGTTCTTAGACTCCATGAAATCCTTCTTAAGCAACCTGATCCAGTGACCTATTCATGTTCGCATGAGAAGTGGCGATGGTTTCAGAAATGTCTAGGTGCATTAGATGGTACACACATCAAAGTGAATGTAAGTATGAGTGATCGCCCAAGGTATAGGTCTAGAAAGGGTGACATTACCACAAATGTACTTGGTGTGTGTTTGCAAAATGGTGAGTTCATATTTGTCATGCCTGGATGGGAAGGGTCTGCATCTGATTCGAGAGTACTTAGAGATGCAGTGTCACGACTTACTGGTCTAAAAGTCCCAAAGGGTTACTACTACTTGTGTGATGCTGGTTATCCAAATGCTGAAGGATTCCTCGCTCCATACCGAGGTCAACGTTACCATCTAACTGAATGGCGTGGAGGAAACCCACCAAAATGCCCGAAAGAGCTATTTAACATGAGGCATTCCTTTGCTAGAAACGTTATTGAAAGGGCATTTGGATCATTGAATTGTCGGTGGACCATTCTACAAGGGAGATCCTATTACCTCGTTGACATACAATGTAAAATAATAACAGCATGTTGCCTCTTACATAACTTGATACATAGAGAAATGGGTTCAGAGGCAACATTTAAAGAGCCACATCTTGGTGAAGGTGATTCAAGTGAGATGAACATTGAGAATATAAACTTCGTGGAAACAACTAATGTCTGGACTGAATGGAGGGATAATCTTGCAAACCAAATGTTTGAGGATTGGAATAATGTATGACTAATATATGTAGTTTAGTTTCCTATATAATTTTGTTTTATCACATGATCTGTACTTGAACTATATTTTTTTTGTGTAATTGAAGTCAGAAATACATAGGGTTTCCTCTAAATTATGAGAA ATGAGTGATCGCCCAAGGTATAGGTCTAGAAAGGGTGACATTACCACAAATGTACTTGGTGTGTGTTTGCAAAATGGTGAGTTCATATTTGTCATGCCTGGATGGGAAGGGTCTGCATCTGATTCGAGAGTACTTAGAGATGCAGTGTCACGACTTACTGGTCTAAAAGTCCCAAAGGGTTACTACTACTTGTGTGATGCTGGTTATCCAAATGCTGAAGGATTCCTCGCTCCATACCGAGGTCAACGTTACCATCTAACTGAATGGCGTGGAGGAAACCCACCAAAATGCCCGAAAGAGCTATTTAACATGAGGCATTCCTTTGCTAGAAACGTTATTGAAAGGGCATTTGGATCATTGAATTGTCGGTGGACCATTCTACAAGGGAGATCCTATTACCTCGTTGACATACAATGTAAAATAATAACAGCATGTTGCCTCTTACATAACTTGATACATAGAGAAATGGGTTCAGAGGCAACATTTAAAGAGCCACATCTTGGTGAAGGTGATTCAAGTGAGATGAACATTGAGAATATAAACTTCGTGGAAACAACTAATGTCTGGACTGAATGGAGGGATAATCTTGCAAACCAAATGTTTGAGGATTGGAATAATGTATGA MSDRPRYRSRKGDITTNVLGVCLQNGEFIFVMPGWEGSASDSRVLRDAVSRLTGLKVPKGYYYLCDAGYPNAEGFLAPYRGQRYHLTEWRGGNPPKCPKELFNMRHSFARNVIERAFGSLNCRWTILQGRSYYLVDIQCKIITACCLLHNLIHREMGSEATFKEPHLGEGDSSEMNIENINFVETTNVWTEWRDNLANQMFEDWNNV Homology
BLAST of MELO.jh014215.1 vs. NCBI nr
Match: KAA0065306.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 645 bits (1663), Expect = 4.50e-230 Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. NCBI nr
Match: KAA0048191.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 560 bits (1442), Expect = 1.86e-196 Identity = 271/317 (85.49%), Postives = 280/317 (88.33%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. NCBI nr
Match: TYK08067.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 535 bits (1378), Expect = 1.43e-187 Identity = 262/308 (85.06%), Postives = 269/308 (87.34%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. NCBI nr
Match: TYK06362.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 456 bits (1172), Expect = 7.37e-157 Identity = 230/304 (75.66%), Postives = 239/304 (78.62%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. NCBI nr
Match: TYK05758.1 (putative nuclease HARBI1 [Cucumis melo var. makuwa]) HSP 1 Score: 433 bits (1114), Expect = 6.17e-151 Identity = 205/239 (85.77%), Postives = 214/239 (89.54%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy Swiss-Prot
Match: B0BN95 (Putative nuclease HARBI1 OS=Rattus norvegicus OX=10116 GN=Harbi1 PE=2 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 3.4e-12 Identity = 51/170 (30.00%), Postives = 78/170 (45.88%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy Swiss-Prot
Match: Q96MB7 (Putative nuclease HARBI1 OS=Homo sapiens OX=9606 GN=HARBI1 PE=1 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 3.8e-11 Identity = 50/170 (29.41%), Postives = 77/170 (45.29%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy Swiss-Prot
Match: Q8BR93 (Putative nuclease HARBI1 OS=Mus musculus OX=10090 GN=Harbi1 PE=2 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 6.4e-11 Identity = 48/169 (28.40%), Postives = 71/169 (42.01%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy Swiss-Prot
Match: Q17QR8 (Putative nuclease HARBI1 OS=Bos taurus OX=9913 GN=HARBI1 PE=2 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 8.4e-11 Identity = 50/170 (29.41%), Postives = 77/170 (45.29%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy Swiss-Prot
Match: Q6AZB8 (Putative nuclease HARBI1 OS=Danio rerio OX=7955 GN=harbi1 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 3.5e-09 Identity = 56/215 (26.05%), Postives = 92/215 (42.79%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy TrEMBL
Match: A0A5A7VG45 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1023G00220 PE=3 SV=1) HSP 1 Score: 645 bits (1663), Expect = 2.18e-230 Identity = 303/304 (99.67%), Postives = 304/304 (100.00%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy TrEMBL
Match: A0A5A7U3R2 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold63G001010 PE=3 SV=1) HSP 1 Score: 560 bits (1442), Expect = 9.00e-197 Identity = 271/317 (85.49%), Postives = 280/317 (88.33%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy TrEMBL
Match: A0A5D3C7X6 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold265G002160 PE=3 SV=1) HSP 1 Score: 535 bits (1378), Expect = 6.90e-188 Identity = 262/308 (85.06%), Postives = 269/308 (87.34%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy TrEMBL
Match: A0A5D3C542 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G00540 PE=3 SV=1) HSP 1 Score: 456 bits (1172), Expect = 3.57e-157 Identity = 230/304 (75.66%), Postives = 239/304 (78.62%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. ExPASy TrEMBL
Match: A0A5D3C3H1 (Putative nuclease HARBI1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002470 PE=3 SV=1) HSP 1 Score: 433 bits (1114), Expect = 2.99e-151 Identity = 205/239 (85.77%), Postives = 214/239 (89.54%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. TAIR 10
Match: AT5G41980.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 184.5 bits (467), Expect = 1.3e-46 Identity = 103/282 (36.52%), Postives = 154/282 (54.61%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. TAIR 10
Match: AT1G43722.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 135.6 bits (340), Expect = 6.8e-32 Identity = 79/231 (34.20%), Postives = 116/231 (50.22%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. TAIR 10
Match: AT5G35695.1 (CONTAINS InterPro DOMAIN/s: Putative harbinger transposase-derived nuclease (InterPro:IPR006912); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 128.6 bits (322), Expect = 8.3e-30 Identity = 81/219 (36.99%), Postives = 111/219 (50.68%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. TAIR 10
Match: AT5G28950.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41980.1); Has 448 Blast hits to 446 proteins in 74 species: Archae - 0; Bacteria - 0; Metazoa - 31; Fungi - 21; Plants - 396; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 89.0 bits (219), Expect = 7.3e-18 Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 0
BLAST of MELO.jh014215.1 vs. TAIR 10
Match: AT5G28730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G43722.1); Has 496 Blast hits to 496 proteins in 68 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 23; Plants - 470; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 73.2 bits (178), Expect = 4.1e-13 Identity = 58/185 (31.35%), Postives = 84/185 (45.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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