MELO.jh014060.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh014060.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12
Location	chr06: 30896737 .. 30901871 (-)
RNA-Seq Expression	MELO.jh014060.1
Synteny	MELO.jh014060.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDSstart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

AACTGAGAGAGAACACGATCTTAAGACAGGTCTATAATAGGGAGAGGATAATTTTTCTGGAGTGGAAGAGGAGAAGAAATTTTGGGATATGAAGGCTCTGTAATACCCGTTCAAACGGTGGTTGAAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTATAAGTAAGTAGGTCTAAATCCCCTTTCTTTCCTATTTCTATATTTTCCTTTCTTAGATTGCATTTGATCGGAATGATGTTCTTTCTTTGGGTTGCATTTTGAATTTCTAGATTCTTTTCACTTATTTGTTTTTAAAAATTTATTCTCTTTATTTATTTGTGCATTTCCAGTTCCATTGATCTGTTAATTAAACAGTATTGGAAGTATGTAAGTACACAAGAATTTAGCATCTAACTGATTTTGAACTGTGGAAAGCCAGCAGTTTTCTAAGCCCAATGTTGAGCCTTTGCAATTGAGTTTTAAAATTTTAGGCCATGTGTTGGTAACATTTTTTGGTTTCAGTTTTTGAAAATTATGCCTACAAACACCCCTTCTATGTTAAATTTCTATGTTAAATTTCTATGTTAAATATCTTGCTTTGTTATTTACTTTTTACCCGCATCTTAAAGTCAAGTCAATTTTTTAATACCAAAAAAGATAGTTTTTAGAAAGTTTGAACCATCATGGTTGGCCTAGTCTCAATAACTAACTTACAGGTTATGTGGTCACCACCTGCCTAATAATTAATTTCTTATGAGTTTTTTTGACACTCAAATGTTGTGAAGTCGGATGGATTGTCTCATGAAATTAGTTGAGGTGTTTGTAAGTTGGTCCGGACACTCACAAATATAAGAAAATAATTGTTTTTGTTTTTAGAAATTGGCTAAGAATTCAACTTTTGTACCTAAAGAAATATGCAAGACATTGTAAGAAATTACCTTTTTGCCCAGTTGTACTCTACATTAAGAGGATGATGTTCCTGACAAATGGAGGGTTAGAGCACTCTTGAATTAGAGTGATTCATAGGTAGCTTCCTTTGTTGTTTATAGGATGAAACTTCTGTTATTGGACATATACAGCTCACAAAATTTTCACTCTTTGGTTTGCTAGTGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGGTAAGCATTTATGGATCTATGTTTAAAACTTATGAATTAAAAGAAGGGCTTTGTTATTTGAATCAGCCGATTATGTCATTTTTAAATCACGGTTTAAGATATAGTACCATTTTTGGGAAAATGGTTATTAACATGAGCTGGGTATGTAGTCTAGGAAGAACCGAATTTGCTGATGGTAGGTTCTTCTGATGATGATTGCTTATATTTTATTGCCGCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGTAACTCATTACCTTCTTCCATGACCAACTGATCTTTGCATCCCACTTGAATGATCAGAAGATTGGTGATTGGTGTGCCACACATGATTTGATATTTATATTGTTAGTTCTTTTGCCATTGTCTTCAGGAAATGATGGAACTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCGTATGTTGACTCTTCAATAAAATTTTGCATCTTTTTACTCGGTTGTTCATGACTGAACATTTTTCTACATCATGTAATTAATTATCTTTGTCAATTTCTCCATATCAAAATTGTGACTTATATACAGGAAGAAAGGTATGAGTTGCATTGTACCTGAAATTGCCAAATAGAAGTCACCCAAACATATTCATATTTGAGAATTAATTCTCTTAAAGCCCCGTTGGTAACTATTTCGTTTTTTGTTTTTGGTTTTTGGAAATTAAGCCTATAAACACTTTTTACCCATGTTCTCAAAGCCCAAGTAAAAATTTGGAAACTAAGAAAGTAGTCTTTAATAGCTTGTTTTTGTTTTTGGAATATGGCTAAGAATGCAACTCTTTTATTTGAAGATTGATACGAACTGTGGTAAGAAATAAAAGAAAATCGGCTTATTTTCAAAAACCAAAATAAGAAAATAAAAAAAAAACGAAATGATTACCAAATGAGGCCGTAGGAATTGATGATTGGCTTTATAATCTTACTCAAAACATTCTTACCAAGGTCCTCTTTCCTGCCTCAGTAGATTTTCTTATAGATAGTTTATGCTTCCAATGGGCATTCATATAGCTTCACCTTTTTTCTGTAACCATCTTTTTGCGACTTTTTATGAGGTGTAAAAGCAATTATCATTTGATTTTGCATTTCAGAATTAAATTTATTTGATACTTTTAGAAGAACCAATATCATTCTCGTTCTTTGACTTAACATGGTCTAATTGGAAGTTATCTGTGATCAATTTAGTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTGGTCAGTTGCTTATTGACAAAAACTCAAGTGCTTGTTACACTTGTAGCATATAGCTAATATTCATTTGCTGCATAGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTATCATTTTATTTCATTATGTATTTTTTAGCCCTTTAATCTCCTCCCCACTTCTCACCAAGAGAAAAGAAATGTCTTTTCATTCAATCCTTAAATAGGATTTTTTTTTAAGAGCCATTAAGATCAATGTTTTAAAAGGCTTTTGATATCAATGTTTTAAGAGGGTATTGAGGTTTATGCCTCAGTGAGGCTCGCCCTATGCAAGACTCTAACTTTTAACCTTGAGACTCGTGCTTCTAAAAATGCACCGAGTGACAAAGGTTTAACGATTTGAAAAATAATATTAATTTGCCGCATTCTTCAAATACATAAAAGGTTTGATTTGTGATAATTTGAGCTATTACTATTACAATTACTACAAAAAAAAATATATCATTGATATAATGGAAAGAAAATTAATGTTCAAGGGTTACAAACTTTCGAGTCTTGAAGGAAGTGAAAGTAAAACAAAATCAGGAACTTTGAAACAATTACAATCCTCTTCCTAACGCACACTATTTTGAGCTATTACTAATTTCATATCGTTGCTTTAAGAGCGTACAAACATAAAACTATAGTATAAGTCAATCATATAATAATAGTAGTGACATTGATGTTAAAGATAAGCTATGGCACTTGACAATGGTGATTATGTACAGACACACTTTATGATTATGATGTTCAGTAATACCTAGTTAGTACAATTTAAGGATTTGTAAAATATTTCATCAAATTTAAGGCTTGCACCCCACCTAGAAGAAAAGCCTCAAGATTGCATTTAGCCTTTTTCCCAATTGGAAATAAAACATTTGATTTTAAATAATCATTTGGAATGATCTAAGTATTTTTCTCTTGTTGGCTGATTAATTCCATGTACGTCTTCTGGTCATGTGTAACTCTCTCCCAAATTTGATAGTTCATTCCATTTGGATTCGAGTATATTATACCGATTAGATGCTTACACTCATTTCATTCATTTTGGTATTTCTTGTTCAAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCTGAGGTGGGCCATTCGTTTTAAATTTTATACTGCTATTTTCTTTTATTGGTGAGGTGACATAAATATTGGTTTTTTCTCAATGTTATGGGCATTCCATGGGCAGAAATATTTAAATGTACTTTTCTAGGAGTTTGAGTTAATAGTTTGAATGCTTCGAAGGACCGAGACTTTAGAGCAAGTCTATATTGCTGAATGACATTGATTGTTATTCTTTCTGAGTTTGCTAGTTAATTAATAGTATTATCATTATATCATTTGTTTGCTGTTAAAAACATATGAAAGTTTCTGCGAAATGTGCTTATGCTTAAAGAACTATTCCTCTTCTCTTGTAACGTGGATTTACCTTTGCTTCACCACCAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGAAACCAATTCCGGAGTAAGTTTTTTTTTTTTTTTGCCATCTTACGTGTTTGTTTAGGGCCTTGACTCAACTCAATAGTCATAAATGTCAATATTAGATTGCATAGGATTCACGTTGACATTAGATACAAGGGATTGTGAAGGTTGGCATATCTTTTACCTTTTCTGAAAAAAAGAAAACAACAAAGTGCCTATTGAATACCAAAAAGTTCCCATTCTTTCATATTCAGGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACCAACATGAATGATGATTGCCCATCAAGGAGAACTCGCCAACACTAAAGCTAGCAGTTTGTTCTATGTCCAACAATTCAGTAAGCTTCTGAGTTCCGATTACTTACCTCCAAATTTTCCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTACAAAAGTCTCAAACAAGATTGTCACTCTGCATTGCCTTGGTTATTTGTCTGATGAAAAGCAGTTATAACTTAAATTTTATATAGTAAGTTTAATAAGCATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTAGCAATTGTCCGTAGTGGCATTGCCTTGGAAAATTCACTGTGGGATTGATATTATTCCTGTTGGTTATGATTTGATTTGTAAAACTTTTTATCCCATATTATTGGAACTCGTTGTAATGTTTTCAGGCTCATCTTGAGGGATAAATAATCATGATGCATGCGATATTTTGTTGTGTGCTCTTGCTACTAAATTTGTGGGGGGTGTAAGGATAGAAGGTGAAGCCTGAGAACATGATGTTAGGGCGTAGGAATAGGATTCATATGTTAGTGTTTAGGTCTTTGAGGATGAGAATTTTGGTGATTTTTATTTCATTTGGCTGTCTAAAATATTATATTTTTGTCCTAAATTGATTAATTGTATAAAGTCTTTTTTCCCTTTATGATAGGATTGGGGGGTTCGAAGCAATATGTTAATCTCAATTTATTGTATAAAGTTAAATCAACATTGTTGTTT

mRNA sequence

AACTGAGAGAGAACACGATCTTAAGACAGGTCTATAATAGGGAGAGGATAATTTTTCTGGAGTGGAAGAGGAGAAGAAATTTTGGGATATGAAGGCTCTGTAATACCCGTTCAAACGGTGGTTGAAACGAAGATAATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTATAATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGATGGAACTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCTGAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGAAACCAATTCCGGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACCAACATGAATGATGATTGCCCATCAAGGAGAACTCGCCAACACTAAAGCTAGCAGTTTGTTCTATGTCCAACAATTCAGTAAGCTTCTGAGTTCCGATTACTTACCTCCAAATTTTCCTGAGGACATGCCCTTCTACTTGACTGTATCAGATCCTGCCCTACAAAAGTCTCAAACAAGATTGTCACTCTGCATTGCCTTGGTTATTTGTCTGATGAAAAGCAGTTATAACTTAAATTTTATATAGTAAGTTTAATAAGCATCCTTATAGAATACTTGTGACAGTTTTGACCTCCCCCATTCTATCTAGAGGCTGAGAAAAGTAACTAGCAATTGTCCGTAGTGGCATTGCCTTGGAAAATTCACTGTGGGATTGATATTATTCCTGTTGGTTATGATTTGATTTGTAAAACTTTTTATCCCATATTATTGGAACTCGTTGTAATGTTTTCAGGCTCATCTTGAGGGATAAATAATCATGATGCATGCGATATTTTGTTGTGTGCTCTTGCTACTAAATTTGTGGGGGGTGTAAGGATAGAAGGTGAAGCCTGAGAACATGATGTTAGGGCGTAGGAATAGGATTCATATGTTAGTGTTTAGGTCTTTGAGGATGAGAATTTTGGTGATTTTTATTTCATTTGGCTGTCTAAAATATTATATTTTTGTCCTAAATTGATTAATTGTATAAAGTCTTTTTTCCCTTTATGATAGGATTGGGGGGTTCGAAGCAATATGTTAATCTCAATTTATTGTATAAAGTTAAATCAACATTGTTGTTT

Coding sequence (CDS)

ATGTCGAAACTTTTTGGGAAAATTGCCGGTTTCTTCAGCAATAGAACTCTGGTGGGAGTGGACAAAGCGGGAAACAGGTACTTCTTCGTAAAAGAAGAAATCGATGGTATAATGAAAGAGAAGAGATGGGTGGTATTTAAGGGTGAGGATGATCCAACGTCAATTCCAGTGGAATGGATATGTTGGTTAAATGGGCAGCGTAAAAAGGCTCCAACCCCAGAGGAAATGATGGAACTAGAAGCTAGGCGTGAACGTGTACGACAAAATGTTGCTCTTCTCAAGAAAGAAGAGATGGAAAGAAACTCTAAAGAAGGCAAATTACGGAAAATCATCAGCACTGGTCAAGTTATGGGTCCTGACTTGAAAAGCTTTATCCGACAGGTCCCAACTGGTTCAGAAGGTGCCCAAGATGTGGAAGGATTGCCTACAAGAGATACCCTGAGGAACTCAAACGAAAAGGAGCCAGTTCAAGAGAAACCAATTCCGGAGTCCTCCGAGCCTGTTGGGTCTGGCCATACATTTAGACCCGGAACATGGCAGCCACCAACATGA

Protein sequence

MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQPPT

Homology

[Close]

BLAST of MELO.jh014060.1 vs. NCBI nr
Match: KAA0033972.1 (NDUFA12 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 367 bits (943), Expect = 3.23e-128
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of MELO.jh014060.1 vs. NCBI nr
Match: XP_004152928.1 (uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hypothetical protein Csa_010369 [Cucumis sativus])

HSP 1 Score: 351 bits (901), Expect = 8.20e-122
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPESSEPVGSGHTF+PGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPESSEPVGSGHTFKPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of MELO.jh014060.1 vs. NCBI nr
Match: XP_038903174.1 (uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida])

HSP 1 Score: 349 bits (895), Expect = 6.74e-121
Identity = 175/183 (95.63%), Postives = 177/183 (96.72%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           LKSFIRQ PTGSEGAQDVEGL TRD+LRNSNEKE V+EKPIPESSEPVGSG TFRPGTWQ
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLRNSNEKEAVKEKPIPESSEPVGSGQTFRPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of MELO.jh014060.1 vs. NCBI nr
Match: XP_038903173.1 (uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida])

HSP 1 Score: 341 bits (874), Expect = 1.37e-117
Identity = 174/190 (91.58%), Postives = 177/190 (93.16%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPES-------SEPVGSGHT 180
           LKSFIRQ PTGSEGAQDVEGL TRD+LRNSNEKE V+EKPIP+S       SEPVGSG T
Sbjct: 121 LKSFIRQFPTGSEGAQDVEGLTTRDSLRNSNEKEAVKEKPIPDSHSFTFRSSEPVGSGQT 180

Query: 181 FRPGTWQPPT 183
           FRPGTWQPPT
Sbjct: 181 FRPGTWQPPT 190

[Close]

BLAST of MELO.jh014060.1 vs. NCBI nr
Match: XP_022155795.1 (uncharacterized protein LOC111022834 isoform X1 [Momordica charantia])

HSP 1 Score: 312 bits (800), Expect = 2.05e-106
Identity = 154/183 (84.15%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMERNS+EG LRK+IS  QV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISADQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           L SFIRQ PTGSEGAQD EG   R++ RNS EKE V+EKPIPESSEPVGSG TFRPGTWQ
Sbjct: 121 LNSFIRQFPTGSEGAQDEEGSAARNSPRNSKEKEAVKEKPIPESSEPVGSGQTFRPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of MELO.jh014060.1 vs. ExPASy Swiss-Prot
Match: Q54MV7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium discoideum OX=44689 GN=ndufa12 PE=2 SV=2)

HSP 1 Score: 48.9 bits (115), Expect = 7.1e-05
Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = 0


Query: 16 TLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKG--EDDPTSIPVEWICWLNGQRKKAPT 73
          TLVGVDK GNRY+  ++EI G     RWV +     +DPT+IP E+  W++    K P+
Sbjct: 33 TLVGVDKVGNRYYENRQEIYG---RHRWVEYGDYKSNDPTTIPPEYHSWIHHVSDKLPS 88

[Close]

BLAST of MELO.jh014060.1 vs. ExPASy Swiss-Prot
Match: Q59J78 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 OS=Mus musculus OX=10090 GN=Ndufaf2 PE=1 SV=1)

HSP 1 Score: 47.4 bits (111), Expect = 2.1e-04
Identity = 48/174 (27.59%), Postives = 76/174 (43.68%), Query Frame = 0


Query: 15  RTLVGVDKAGNRYFFVKEEID---GIMKEKRWVVFKG----EDDPTSIPVEWICWLNGQR 74
           R  VG D  GN+Y++V E  +     ++EKR V        + +   IP EW  W+   R
Sbjct: 20  REHVGTDHLGNKYYYVAEYKNWRGQTIREKRIVEAANRKEVDYEAGDIPTEWEAWIRRTR 79

Query: 75  KKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPDLKSFIRQ 134
           K  PT EE+++ E  RE ++     +K ++     K GK      T + + P        
Sbjct: 80  KTPPTMEEILKNEKYREEIK-----IKSQDFYEKDKLGK-----ETSEELLP-------- 139

Query: 135 VPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQP 182
               S  A  V+G        +++     +E+P   S  P  +G TF+PG+W P
Sbjct: 140 ----SPTATQVKG--------HASAPYFGREEP---SVAPTSTGKTFQPGSWTP 160

[Close]

BLAST of MELO.jh014060.1 vs. ExPASy TrEMBL
Match: A0A5A7SS01 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold400G00330 PE=3 SV=1)

HSP 1 Score: 367 bits (943), Expect = 1.56e-128
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of MELO.jh014060.1 vs. ExPASy TrEMBL
Match: A0A0A0L526 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus OX=3659 GN=Csa_3G077630 PE=3 SV=1)

HSP 1 Score: 351 bits (901), Expect = 3.97e-122
Identity = 175/183 (95.63%), Postives = 178/183 (97.27%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWV+FKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIAAFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVLFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEM ELEARRERVRQNVALLKKEEMERNSKEG LRKIISTGQVMGPD
Sbjct: 61  CWLNGQRKKAPTPEEMRELEARRERVRQNVALLKKEEMERNSKEGNLRKIISTGQVMGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           LKSFIRQVPTGSEGAQDVEGLPTRD+LRNSNEKE  QEKPIPESSEPVGSGHTF+PGTWQ
Sbjct: 121 LKSFIRQVPTGSEGAQDVEGLPTRDSLRNSNEKEADQEKPIPESSEPVGSGHTFKPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of MELO.jh014060.1 vs. ExPASy TrEMBL
Match: A0A6J1DNE9 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica charantia OX=3673 GN=LOC111022834 PE=3 SV=1)

HSP 1 Score: 312 bits (800), Expect = 9.90e-107
Identity = 154/183 (84.15%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLFGKIA FFS+RT+ GVDK+GN+YFF KEEIDG+MKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFGKIASFFSSRTMAGVDKSGNKYFFRKEEIDGLMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNV LLKK+EMERNS+EG LRK+IS  QV GPD
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVTLLKKQEMERNSREGNLRKVISADQVAGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           L SFIRQ PTGSEGAQD EG   R++ RNS EKE V+EKPIPESSEPVGSG TFRPGTWQ
Sbjct: 121 LNSFIRQFPTGSEGAQDEEGSAARNSPRNSKEKEAVKEKPIPESSEPVGSGQTFRPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 183

[Close]

BLAST of MELO.jh014060.1 vs. ExPASy TrEMBL
Match: A0A6J1JVV8 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 310 bits (794), Expect = 7.59e-106
Identity = 156/183 (85.25%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLF KIAGFF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER SKE  LRK++ST  V GP+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVST--VAGPN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           LKSFIRQ PTGSEGAQD EG   +D+LRNS E E  +EKPIPESSEP+GSG TFRPGTWQ
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLRNSEENEAAKEKPIPESSEPMGSGQTFRPGTWQ 180

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 181

[Close]

BLAST of MELO.jh014060.1 vs. ExPASy TrEMBL
Match: A0A6J1JSL7 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxima OX=3661 GN=LOC111487996 PE=3 SV=1)

HSP 1 Score: 308 bits (789), Expect = 4.09e-105
Identity = 155/183 (84.70%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MSKLF KIAGFF++RTL+GVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI
Sbjct: 1   MSKLFKKIAGFFTDRTLMGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMER SKE  LRK++STG    P+
Sbjct: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERKSKESNLRKVVSTG----PN 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEPVQEKPIPESSEPVGSGHTFRPGTWQ 180
           LKSFIRQ PTGSEGAQD EG   +D+LRNS E E  +EKPIPESSEP+GSG TFRPGTWQ
Sbjct: 121 LKSFIRQFPTGSEGAQDNEGSAAKDSLRNSEENEAAKEKPIPESSEPMGSGQTFRPGTWQ 179

Query: 181 PPT 183
           PPT
Sbjct: 181 PPT 179

[Close]

BLAST of MELO.jh014060.1 vs. TAIR 10
Match: AT4G26965.1 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 216.1 bits (549), Expect = 2.4e-56
Identity = 112/186 (60.22%), Postives = 140/186 (75.27%), Query Frame = 0


Query: 1   MSKLFGKIAGFFSNRTLVGVDKAGNRYFFVKEEIDGIMKEKRWVVFKGEDDPTSIPVEWI 60
           MS+L+ + AG FS+++ +GVDK GN+YF   EEIDG +KEKRWV F+ E+DPTSIPVEWI
Sbjct: 1   MSRLWARFAGLFSSKSFIGVDKTGNKYFSRMEEIDGFVKEKRWVKFRREEDPTSIPVEWI 60

Query: 61  CWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEEMERNSKEGKLRKIISTGQVMGPD 120
           CWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE E+ ++ G  RK I+ G+V GPD
Sbjct: 61  CWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEEEEKKARVGTGRK-ITIGKVDGPD 120

Query: 121 LKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEP---VQEKPIPESSEPVGSGHTFRPG 180
           L SF+RQ P  S+G +  E     D  R + E EP     E P P+++EP GSG +FRPG
Sbjct: 121 LTSFVRQFPPDSKGGEPEEASEEADKSR-AKEHEPEIVSAEPPEPKTTEPSGSGSSFRPG 180

Query: 181 TWQPPT 184
           TWQPP+
Sbjct: 181 TWQPPS 184

[Close]

BLAST of MELO.jh014060.1 vs. TAIR 10
Match: AT4G26965.2 (NADH:ubiquinone oxidoreductase, 17.2kDa subunit )

HSP 1 Score: 174.1 bits (440), Expect = 1.0e-43
Identity = 93/149 (62.42%), Postives = 112/149 (75.17%), Query Frame = 0


Query: 38  MKEKRWVVFKGEDDPTSIPVEWICWLNGQRKKAPTPEEMMELEARRERVRQNVALLKKEE 97
           MKEKRWV F+ E+DPTSIPVEWICWLNGQRK+APTPEEM+ELEARRERV+ NVALLKKEE
Sbjct: 1   MKEKRWVKFRREEDPTSIPVEWICWLNGQRKRAPTPEEMIELEARRERVKLNVALLKKEE 60

Query: 98  MERNSKEGKLRKIISTGQVMGPDLKSFIRQVPTGSEGAQDVEGLPTRDTLRNSNEKEP-- 157
            E+ ++ G  RK I+ G+V GPDL SF+RQ P  S+G +  E     D  R + E EP  
Sbjct: 61  EEKKARVGTGRK-ITIGKVDGPDLTSFVRQFPPDSKGGEPEEASEEADKSR-AKEHEPEI 120

Query: 158 -VQEKPIPESSEPVGSGHTFRPGTWQPPT 184
              E P P+++EP GSG +FRPGTWQPP+
Sbjct: 121 VSAEPPEPKTTEPSGSGSSFRPGTWQPPS 147

The following BLAST results are available for this feature:

BLAST of MELO.jh014060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0033972.1	3.23e-128	100.00	NDUFA12 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_004152928.1	8.20e-122	95.63	uncharacterized protein LOC101214441 isoform X2 [Cucumis sativus] >KGN56129.1 hy...	[more]
XP_038903174.1	6.74e-121	95.63	uncharacterized protein LOC120089839 isoform X2 [Benincasa hispida]	[more]
XP_038903173.1	1.37e-117	91.58	uncharacterized protein LOC120089839 isoform X1 [Benincasa hispida]	[more]
XP_022155795.1	2.05e-106	84.15	uncharacterized protein LOC111022834 isoform X1 [Momordica charantia]	[more]

BLAST of MELO.jh014060.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54MV7	7.1e-05	44.07	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Dictyostelium d...	[more]
Q59J78	2.1e-04	27.59	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2 OS=Mus musc...	[more]

BLAST of MELO.jh014060.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7SS01	1.56e-128	100.00	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis melo va...	[more]
A0A0A0L526	3.97e-122	95.63	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucumis sativus...	[more]
A0A6J1DNE9	9.90e-107	84.15	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Momordica chara...	[more]
A0A6J1JVV8	7.59e-106	85.25	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim...	[more]
A0A6J1JSL7	4.09e-105	84.70	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 OS=Cucurbita maxim...	[more]

BLAST of MELO.jh014060.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G26965.1	2.4e-56	60.22	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]
AT4G26965.2	1.0e-43	62.42	NADH:ubiquinone oxidoreductase, 17.2kDa subunit	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 76..96
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 129..183
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 146..160
None	No IPR available	PANTHER	PTHR12910:SF1	NADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX SUBUNIT 12	coord: 1..183
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PFAM	PF05071	NDUFA12	coord: 16..97 e-value: 1.3E-12 score: 48.5
IPR007763	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12	PANTHER	PTHR12910	NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2	coord: 1..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh014060.1.t1	MELO.jh014060.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032981	mitochondrial respiratory chain complex I assembly
cellular_component	GO:0016020	membrane