MELO.jh013293.1 (gene) Melon (Harukei-3) v1.41
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTATTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGTAATTTGTGGGACTGTGCACAGGGAAAGAGATAAATGGAGGAAGAAGAAACGAAAAAGTAAAGATCAAGAACTCACAAGCGATGCTATGGGTCTCCTCGCCGTGGGTCTCTGTCAAGAAGAAAGGACGTGGAGATGAGAAGAATGGGGTTAAGGTTGGGGTTTTCATCATGCGTCGTTCGTCGTTCGTGA ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTATTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGTAATTTGTGGGACTGTGCACAGGGAAAGAGATAAATGGAGGAAGAAGAAACGAAAAAGTAAAGATCAAGAACTCACAAGCGATGCTATGGGTCTCCTCGCCGTGGGTCTCTGTCAAGAAGAAAGGACGTGGAGATGAGAAGAATGGGGTTAAGGTTGGGGTTTTCATCATGCGTCGTTCGTCGTTCGTGA ATGGACAAAGGCGTTGTTGAGTTAGGGAGAGAAAGGGAGAGACAAAGAAGACAAGAAATCAGTGCTATTTATATGTCTCTAAGAACCCTACTTCCTCTTGAATTTATCAAGGTAATTTGTGGGACTGTGCACAGGGAAAGAGATAAATGGAGGAAGAAGAAACGAAAAAGTAAAGATCAAGAACTCACAAGCGATGCTATGGGTCTCCTCGCCGTGGGTCTCTGTCAAGAAGAAAGGACGTGGAGATGA MDKGVVELGRERERQRRQEISAIYMSLRTLLPLEFIKVICGTVHRERDKWRKKKRKSKDQELTSDAMGLLAVGLCQEERTWR Homology
BLAST of MELO.jh013293.1 vs. NCBI nr
Match: TYK30150.1 (transcription factor bHLH36 [Cucumis melo var. makuwa]) HSP 1 Score: 135 bits (341), Expect = 1.22e-39 Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. NCBI nr
Match: KAA0033316.1 (transcription factor bHLH36-like [Cucumis melo var. makuwa] >TYK21590.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]) HSP 1 Score: 116 bits (291), Expect = 1.01e-31 Identity = 61/74 (82.43%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. NCBI nr
Match: KAA0065871.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK20283.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 119 bits (299), Expect = 1.33e-29 Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. NCBI nr
Match: KAA0044825.1 (transcription factor bHLH36-like [Cucumis melo var. makuwa] >TYK16639.1 transcription factor bHLH36-like [Cucumis melo var. makuwa]) HSP 1 Score: 72.8 bits (177), Expect = 1.46e-14 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. NCBI nr
Match: XP_022967981.1 (transcription factor bHLH118-like [Cucurbita maxima]) HSP 1 Score: 51.6 bits (122), Expect = 2.50e-05 Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. ExPASy TrEMBL
Match: A0A5D3E3K5 (Transcription factor bHLH36 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G001340 PE=4 SV=1) HSP 1 Score: 135 bits (341), Expect = 5.93e-40 Identity = 71/83 (85.54%), Postives = 75/83 (90.36%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. ExPASy TrEMBL
Match: A0A5A7STJ5 (Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold275G00940 PE=4 SV=1) HSP 1 Score: 116 bits (291), Expect = 4.89e-32 Identity = 61/74 (82.43%), Postives = 64/74 (86.49%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. ExPASy TrEMBL
Match: A0A5A7VJK9 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold708G00020 PE=3 SV=1) HSP 1 Score: 119 bits (299), Expect = 6.46e-30 Identity = 61/79 (77.22%), Postives = 68/79 (86.08%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. ExPASy TrEMBL
Match: A0A5A7TTV0 (Transcription factor bHLH36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004670 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 7.08e-15 Identity = 37/38 (97.37%), Postives = 38/38 (100.00%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. ExPASy TrEMBL
Match: A0A6J1HTL2 (transcription factor bHLH118-like OS=Cucurbita maxima OX=3661 GN=LOC111467355 PE=4 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.21e-05 Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0
BLAST of MELO.jh013293.1 vs. TAIR 10
Match: AT5G51780.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein ) HSP 1 Score: 43.1 bits (100), Expect = 1.2e-04 Identity = 28/67 (41.79%), Postives = 42/67 (62.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|