MELO.jh013124.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh013124.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr06: 11700976 .. 11701221 (+)
RNA-Seq ExpressionMELO.jh013124.1
SyntenyMELO.jh013124.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ACGATTTTTCCATTCCTTCCAAAGGTAATCACTCTTGCCCCCGTCGCCGCACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAGCCGTACTGCAACATCTGACGCTGCCCAGATCTGACTCCAGCCGCCTCTTTCATCTCCACTAACCCTAATTTCCAAATCCCACAATAACATCCTAGTTTGA

mRNA sequence

ACGATTTTTCCATTCCTTCCAAAGGTAATCACTCTTGCCCCCGTCGCCGCACCTCAGCCGATGCCTCATCGTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAGCCGTACTGCAACATCTGACGCTGCCCAGATCTGACTCCAGCCGCCTCTTTCATCTCCACTAACCCTAATTTCCAAATCCCACAATAACATCCTAGTTTGA

Coding sequence (CDS)

ATGCCTCATCGTATGCCTCCAATGCTGACTCCAGTCGCAAGCTCAACCAAATCTGACTCCTACTGCTACCGTGATGCTAATTCCAGCCGTACTGCAACATCTGACGCTGCCCAGATCTGA

Protein sequence

MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI
Homology
BLAST of MELO.jh013124.1 vs. NCBI nr
Match: KAA0037112.1 (uncharacterized protein E6C27_scaffold379G00130 [Cucumis melo var. makuwa] >TYK13964.1 uncharacterized protein E5676_scaffold832G001680 [Cucumis melo var. makuwa])

HSP 1 Score: 77.0 bits (188), Expect = 2.88e-17
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 68

BLAST of MELO.jh013124.1 vs. NCBI nr
Match: KAA0062675.1 (uncharacterized protein E6C27_scaffold1576G00010 [Cucumis melo var. makuwa] >TYK08457.1 uncharacterized protein E5676_scaffold632G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 75.1 bits (183), Expect = 2.96e-16
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPMLTPVASSTKSDSYCYRDANSSR ATSDAAQI
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSRAATSDAAQI 68

BLAST of MELO.jh013124.1 vs. NCBI nr
Match: KAA0033001.1 (uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa] >TYK03410.1 uncharacterized protein E5676_scaffold121G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 71.2 bits (173), Expect = 9.84e-15
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPMLTPVASSTKSDSYCYRDANSS  ATS+AAQI
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSHAATSNAAQI 68

BLAST of MELO.jh013124.1 vs. NCBI nr
Match: KAA0042899.1 (uncharacterized protein E6C27_scaffold44G004160 [Cucumis melo var. makuwa] >TYK05301.1 uncharacterized protein E5676_scaffold108G001210 [Cucumis melo var. makuwa])

HSP 1 Score: 70.5 bits (171), Expect = 1.57e-14
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPM TP+ASSTKSDSYCYRDANSSR ATSDA QI
Sbjct: 21 MPHRMPPMPTPIASSTKSDSYCYRDANSSRAATSDATQI 59

BLAST of MELO.jh013124.1 vs. NCBI nr
Match: KAA0050820.1 (uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa] >TYK08525.1 uncharacterized protein E5676_scaffold323G00630 [Cucumis melo var. makuwa])

HSP 1 Score: 66.6 bits (161), Expect = 4.74e-13
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDA 36
          MPHRMPPMLTPVASSTKSDSYCYRDANSS  ATSD+
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSHAATSDS 65

BLAST of MELO.jh013124.1 vs. ExPASy TrEMBL
Match: A0A5D3CSE0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold832G001680 PE=4 SV=1)

HSP 1 Score: 77.0 bits (188), Expect = 1.39e-17
Identity = 39/39 (100.00%), Postives = 39/39 (100.00%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 68

BLAST of MELO.jh013124.1 vs. ExPASy TrEMBL
Match: A0A5A7V9W6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold632G00010 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.43e-16
Identity = 38/39 (97.44%), Postives = 38/39 (97.44%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPMLTPVASSTKSDSYCYRDANSSR ATSDAAQI
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSRAATSDAAQI 68

BLAST of MELO.jh013124.1 vs. ExPASy TrEMBL
Match: A0A5D3BWD1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold121G00060 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 4.76e-15
Identity = 36/39 (92.31%), Postives = 37/39 (94.87%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPMLTPVASSTKSDSYCYRDANSS  ATS+AAQI
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSHAATSNAAQI 68

BLAST of MELO.jh013124.1 vs. ExPASy TrEMBL
Match: A0A5D3C069 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G001210 PE=4 SV=1)

HSP 1 Score: 70.5 bits (171), Expect = 7.62e-15
Identity = 35/39 (89.74%), Postives = 36/39 (92.31%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDAAQI 39
          MPHRMPPM TP+ASSTKSDSYCYRDANSSR ATSDA QI
Sbjct: 21 MPHRMPPMPTPIASSTKSDSYCYRDANSSRAATSDATQI 59

BLAST of MELO.jh013124.1 vs. ExPASy TrEMBL
Match: A0A5A7U6M1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold323G00630 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 2.30e-13
Identity = 33/36 (91.67%), Postives = 34/36 (94.44%), Query Frame = 0

Query: 1  MPHRMPPMLTPVASSTKSDSYCYRDANSSRTATSDA 36
          MPHRMPPMLTPVASSTKSDSYCYRDANSS  ATSD+
Sbjct: 30 MPHRMPPMLTPVASSTKSDSYCYRDANSSHAATSDS 65

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0037112.12.88e-17100.00uncharacterized protein E6C27_scaffold379G00130 [Cucumis melo var. makuwa] >TYK1... [more]
KAA0062675.12.96e-1697.44uncharacterized protein E6C27_scaffold1576G00010 [Cucumis melo var. makuwa] >TYK... [more]
KAA0033001.19.84e-1592.31uncharacterized protein E6C27_scaffold269G00940 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0042899.11.57e-1489.74uncharacterized protein E6C27_scaffold44G004160 [Cucumis melo var. makuwa] >TYK0... [more]
KAA0050820.14.74e-1391.67uncharacterized protein E6C27_scaffold404G00780 [Cucumis melo var. makuwa] >TYK0... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5D3CSE01.39e-17100.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7V9W61.43e-1697.44Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3BWD14.76e-1592.31Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5D3C0697.62e-1589.74Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A5A7U6M12.30e-1391.67Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 11..39

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh013124.1.t1MELO.jh013124.1.t1mRNA