MELO.jh011673.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh011673.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr05: 29245788 .. 29247294 (+)
RNA-Seq ExpressionMELO.jh011673.1
SyntenyMELO.jh011673.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAAAAGAATCCGTATAGTTATTGCCATTTAATCAATCACCTACCCACCGGCTTCCACCTCCTACTTCTTCCCTTACGGACGTGGCGCCCCCTCCTCCCCCGTCGGTGTTTCAACTATCCGTCCACAAACCAACGGCCGCGGAATCACCGGAACCCGAAAACAGTTCAACCCAATTCCCGGAATTACAGAACATTCAGGCGACGGCCGCTGAAGAGTAACTCCGGGAATGCAATTGAACGACAAATCGAACCCGCCGAAGAGATTCCGGCACTGCTGGTTGAAGCCGGAGAAGAAATTGTCTGCTACGGATAGATGTATGAGGCTTCTTAAAGAACAGACCAAATCGGAAACGACGCCGGATAATTGATTGTGGGCAAGATTCAAAATCTCGACTTGGTTCATACAAGAGATTGTATCGGGAAGATGACCGAACAATTTGTTGGAGCTGAAATCCAAAACTTCAATCTCTGTTAAGAACCCAACTCCTTCGGGAATGCAACCGCTTAATTGGTTGTTTAGAAACAGGATTTCCTTCAGTCTTGGACCCATATACCCAAAACTCGCCGGGATTGCTCCGGTGAAGTTATTATTTGCTAAATTTATCACAGACGCCGGCGAATTTCCGAGGTTTTGTGGGATTTCGCCGGCGAATTGGTTATTGTTGAGGAAAATGGCGTCTAATCCCATGTAAAACAAACTTTCCGGGATTGCGCCGGTGAAGGAGTTGAATCTGAGGTCCAAATACCTGAGATTTGGAATGTAGAGAGTGGCGGATGGGAATTCACCGGAGAAATTATTGTTGCTGAGATCGAGTTCTTGAAGGCGTACGAGTTGACGGAATGTTATCGGAACGATGCCGGAAAATCTGTTGCTGTTTAAGTGAATGAGGGTCAGATCGTTGAGAAGAGCCAGCTCCTTGATGAGGGTTCCTCTGAGATTTTTTCCATTAAAGTCGATTCCGGTGATGGAGATTTGGCCGGAATTTAGACGTGTACAAAAGATTCCTTTGTAAGAACACACATCGGAGCCAACCCACGTGGTTAACATTCCAGTTGGGTCATCGGAAATGGCAGATTTCCATGTCTGAAGAACTGAGTATGCTCTGTTTAGAACAGTCTCTAACAATGGATTCGGAGTTGGAGTCGGAGTAAGAGTCGGATTCGGAGTGTTTCCCCCTCCACCACCGATCCAAATACCATTTCCACCGCTGCCTCCGCCACCACCAAAGCCAAAACCAACTCGGCCACTTACCCCGCCGATAACAGCTCCAGTAGGAAGAATTAAACCACTTAAAAAAAGACCCAAAAAAACCCAACACTCCATTTTTTAAGTTCTATACACTCACCATGAGTTTGATATTATTTGTTTTGGTTTCAGCATTGAAGATAGAAAAGAAAAAAAAAAAAAAAAAGCTTGAGAATGGTTAAAAATGGAGTTCCTAACTTGAAGAACACTTCTCTATTTCCTTGGGTTTATAATGAGGACTTTCCCTTTTCTTTTTGGTCCT

mRNA sequence

AAAAAGAATCCGTATAGTTATTGCCATTTAATCAATCACCTACCCACCGGCTTCCACCTCCTACTTCTTCCCTTACGGACGTGGCGCCCCCTCCTCCCCCGTCGGTGTTTCAACTATCCGTCCACAAACCAACGGCCGCGGAATCACCGGAACCCGAAAACAGTTCAACCCAATTCCCGGAATTACAGAACATTCAGGCGACGGCCGCTGAAGAGTAACTCCGGGAATGCAATTGAACGACAAATCGAACCCGCCGAAGAGATTCCGGCACTGCTGGTTGAAGCCGGAGAAGAAATTGTCTGCTACGGATAGATGTATGAGGCTTCTTAAAGAACAGACCAAATCGGAAACGACGCCGGATAATTGATTGTGGGCAAGATTCAAAATCTCGACTTGGTTCATACAAGAGATTGTATCGGGAAGATGACCGAACAATTTGTTGGAGCTGAAATCCAAAACTTCAATCTCTGTTAAGAACCCAACTCCTTCGGGAATGCAACCGCTTAATTGGTTGTTTAGAAACAGGATTTCCTTCAGTCTTGGACCCATATACCCAAAACTCGCCGGGATTGCTCCGGTGAAGTTATTATTTGCTAAATTTATCACAGACGCCGGCGAATTTCCGAGGTTTTGTGGGATTTCGCCGGCGAATTGGTTATTGTTGAGGAAAATGGCGTCTAATCCCATGTAAAACAAACTTTCCGGGATTGCGCCGGTGAAGGAGTTGAATCTGAGGTCCAAATACCTGAGATTTGGAATGTAGAGAGTGGCGGATGGGAATTCACCGGAGAAATTATTGTTGCTGAGATCGAGTTCTTGAAGGCGTACGAGTTGACGGAATGTTATCGGAACGATGCCGGAAAATCTGTTGCTGTTTAAGTGAATGAGGGTCAGATCGTTGAGAAGAGCCAGCTCCTTGATGAGGGTTCCTCTGAGATTTTTTCCATTAAAGTCGATTCCGGTGATGGAGATTTGGCCGGAATTTAGACGTGTACAAAAGATTCCTTTGTAAGAACACACATCGGAGCCAACCCACGTGGTTAACATTCCAGTTGGGTCATCGGAAATGGCAGATTTCCATGTCTGAAGAACTGAGTATGCTCTGTTTAGAACAGTCTCTAACAATGGATTCGGAGTTGGAGTCGGAGTAAGAGTCGGATTCGGAGTGTTTCCCCCTCCACCACCGATCCAAATACCATTTCCACCGCTGCCTCCGCCACCACCAAAGCCAAAACCAACTCGGCCACTTACCCCGCCGATAACAGCTCCAGTAGGAAGAATTAAACCACTTAAAAAAAGACCCAAAAAAACCCAACACTCCATTTTTTAAGTTCTATACACTCACCATGAGTTTGATATTATTTGTTTTGGTTTCAGCATTGAAGATAGAAAAGAAAAAAAAAAAAAAAAAGCTTGAGAATGGTTAAAAATGGAGTTCCTAACTTGAAGAACACTTCTCTATTTCCTTGGGTTTATAATGAGGACTTTCCCTTTTCTTTTTGGTCCT

Coding sequence (CDS)

ATGCAACCGCTTAATTGGTTGTTTAGAAACAGGATTTCCTTCAGTCTTGGACCCATATACCCAAAACTCGCCGGGATTGCTCCGGTGAAGTTATTATTTGCTAAATTTATCACAGACGCCGGCGAATTTCCGAGGTTTTGTGGGATTTCGCCGGCGAATTGGTTATTGTTGAGGAAAATGGCGTCTAATCCCATGTAA

Protein sequence

MQPLNWLFRNRISFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMASNPM
Homology
BLAST of MELO.jh011673.1 vs. NCBI nr
Match: KAG5559263.1 (hypothetical protein RHGRI_008977 [Rhododendron griersonianum])

HSP 1 Score: 57.8 bits (138), Expect = 3.34e-09
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 0

Query: 19 IYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMASN 63
          +YPKL GI P  LL A+ +T+AGEFP+F GISP+  L  RK+AS+
Sbjct: 1  MYPKLNGILPENLLLARLMTEAGEFPKFEGISPSKRLSFRKIASS 45

BLAST of MELO.jh011673.1 vs. NCBI nr
Match: KAB8104507.1 (hypothetical protein EE612_037447 [Oryza sativa] >BAT00289.1 Os07g0176400 [Oryza sativa Japonica Group])

HSP 1 Score: 57.4 bits (137), Expect = 7.95e-08
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0

Query: 13  SFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMAS 62
           SFS+  I P L G+ P+ L+ A  +TDAGE PR  G S + WL LRK AS
Sbjct: 61  SFSVAAILPTLEGMQPLSLMLASTMTDAGELPRLAGSSKSKWLSLRKSAS 110

BLAST of MELO.jh011673.1 vs. NCBI nr
Match: KVI11844.1 (hypothetical protein Ccrd_009740 [Cynara cardunculus var. scolymus])

HSP 1 Score: 53.9 bits (128), Expect = 3.76e-07
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 12 ISFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMASNPM 65
          ISF++ PI P LAG  P + LFAK  TD GE P+F GI   N L  +K AS  +
Sbjct: 2  ISFNVDPICPTLAGRHPPRSLFAKTSTDTGELPKFGGIPNLNRLSFKKTASRSL 55

BLAST of MELO.jh011673.1 vs. NCBI nr
Match: PON56989.1 (hypothetical protein PanWU01x14_177190 [Parasponia andersonii])

HSP 1 Score: 53.9 bits (128), Expect = 9.47e-07
Identity = 29/62 (46.77%), Postives = 35/62 (56.45%), Query Frame = 0

Query: 2  QPLNWLFRNRISFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMA 61
           PL+ LF+   SF  G I P   GI P+ +L AK  T+  EFP   GI   N LL +KMA
Sbjct: 26 HPLSSLFKKITSFMFG-IAPMDRGIQPLNMLLAKVTTETVEFPNVSGILDLNRLLFKKMA 85

Query: 62 SN 63
          SN
Sbjct: 86 SN 86

BLAST of MELO.jh011673.1 vs. NCBI nr
Match: RDY13016.1 (hypothetical protein CR513_02119, partial [Mucuna pruriens])

HSP 1 Score: 53.5 bits (127), Expect = 1.20e-06
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0

Query: 1   MQPLNWLFRNRISFSLGPIYPKLAGIAPVKLLFA--KFITDA--GEFP 44
           MQP+NWLF+ RISF+LG + PKL G+ P+ LL A  +F+ +   GE+P
Sbjct: 103 MQPVNWLFKKRISFNLGLMKPKLKGMLPLSLLLASVEFLVEEFIGEWP 150

BLAST of MELO.jh011673.1 vs. ExPASy TrEMBL
Match: A0A0A9D9V6 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.81e-09
Identity = 30/63 (47.62%), Postives = 38/63 (60.32%), Query Frame = 0

Query: 1  MQPLNWLFRNRISFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKM 60
          MQP++W   +  S S+  I P   GI P  LL A  +TDAGE PRF G+   + LLLR M
Sbjct: 1  MQPVSWSSMSTSSLSVLAILPIDGGIQPPSLLCASTMTDAGELPRFAGMGRVSRLLLRMM 60

Query: 61 ASN 63
          AS+
Sbjct: 61 ASS 63

BLAST of MELO.jh011673.1 vs. ExPASy TrEMBL
Match: A0A0P0X2Q6 (Os07g0176400 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0176400 PE=4 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 3.85e-08
Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 0

Query: 13  SFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMAS 62
           SFS+  I P L G+ P+ L+ A  +TDAGE PR  G S + WL LRK AS
Sbjct: 61  SFSVAAILPTLEGMQPLSLMLASTMTDAGELPRLAGSSKSKWLSLRKSAS 110

BLAST of MELO.jh011673.1 vs. ExPASy TrEMBL
Match: A0A103YMK0 (Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_009740 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.82e-07
Identity = 27/54 (50.00%), Postives = 33/54 (61.11%), Query Frame = 0

Query: 12 ISFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMASNPM 65
          ISF++ PI P LAG  P + LFAK  TD GE P+F GI   N L  +K AS  +
Sbjct: 2  ISFNVDPICPTLAGRHPPRSLFAKTSTDTGELPKFGGIPNLNRLSFKKTASRSL 55

BLAST of MELO.jh011673.1 vs. ExPASy TrEMBL
Match: A0A2P5C7H1 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_177190 PE=4 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 4.58e-07
Identity = 29/62 (46.77%), Postives = 35/62 (56.45%), Query Frame = 0

Query: 2  QPLNWLFRNRISFSLGPIYPKLAGIAPVKLLFAKFITDAGEFPRFCGISPANWLLLRKMA 61
           PL+ LF+   SF  G I P   GI P+ +L AK  T+  EFP   GI   N LL +KMA
Sbjct: 26 HPLSSLFKKITSFMFG-IAPMDRGIQPLNMLLAKVTTETVEFPNVSGILDLNRLLFKKMA 85

Query: 62 SN 63
          SN
Sbjct: 86 SN 86

BLAST of MELO.jh011673.1 vs. ExPASy TrEMBL
Match: A0A371ID99 (Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_02119 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 5.82e-07
Identity = 25/48 (52.08%), Postives = 35/48 (72.92%), Query Frame = 0

Query: 1   MQPLNWLFRNRISFSLGPIYPKLAGIAPVKLLFA--KFITDA--GEFP 44
           MQP+NWLF+ RISF+LG + PKL G+ P+ LL A  +F+ +   GE+P
Sbjct: 103 MQPVNWLFKKRISFNLGLMKPKLKGMLPLSLLLASVEFLVEEFIGEWP 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG5559263.13.34e-0957.78hypothetical protein RHGRI_008977 [Rhododendron griersonianum][more]
KAB8104507.17.95e-0852.00hypothetical protein EE612_037447 [Oryza sativa] >BAT00289.1 Os07g0176400 [Oryza... [more]
KVI11844.13.76e-0750.00hypothetical protein Ccrd_009740 [Cynara cardunculus var. scolymus][more]
PON56989.19.47e-0746.77hypothetical protein PanWU01x14_177190 [Parasponia andersonii][more]
RDY13016.11.20e-0652.08hypothetical protein CR513_02119, partial [Mucuna pruriens][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A9D9V63.81e-0947.62Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
A0A0P0X2Q63.85e-0852.00Os07g0176400 protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0176400 PE... [more]
A0A103YMK01.82e-0750.00Uncharacterized protein OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_009... [more]
A0A2P5C7H14.58e-0746.77Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_177190 PE... [more]
A0A371ID995.82e-0752.08Uncharacterized protein (Fragment) OS=Mucuna pruriens OX=157652 GN=CR513_02119 P... [more]
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh011673.1.t1MELO.jh011673.1.t1mRNA