MELO.jh010066.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh010066.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Cyclic nucleotide gated channel 1
Location	chr05: 2213987 .. 2217154 (+)
RNA-Seq Expression	MELO.jh010066.1
Synteny	MELO.jh010066.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCCCCGCACCCACGACTCTTCTTGCAAAGACGTAACCGTAGCACCGCCGCCACACGTCATCGTCCCTCGCTAATCTCGTTCTCCATCGGGTCACTCCTTCACTTTCACGTCCATCTTTGCCGCTGTCACCACCTCTCTTGGCAAGGCAAGTTTTAACAACGTCTCCGGGTCCTCCTACGACGTCATTCTGTTCAAAGCACGTCCTCTTTTCCCTTGAAGTAGATCTAGCACTGCTGGATGACCTCTTTCATCCCCGTCAAAGTAGATCCAAGAATGTGAAGTTTGGTAAGAGTTCTACTACTGCTAATTCTTTATGCTTGTAGTTCTTACAAGGTTGAAAATATCTAAATCTTCACGAACTGGGGAACGATTGAAGACATTGGGCACTGCACCACTTTCTACTTCTGTATGCTGTTGAGGGTTTGTGAAATAAAGCTTTAAATATTATTCTTTACTTGATCTAAGAAAGGGATATACTGATGGTTAAGGGGATAAGACTTTTCCCTCTATAAACTGAACATTTTTCAAGTATATACTTTTATATGCTGCAGGTGATTTTTAAACCATTTTTATTTAATGTATTCATGAATTTTGACCTAAATGAAATGATTTTGTTTCATGTGCACAAAATTATGCTGAGAAACATGTTGAAGGCTATATAGATTATGCAATTTTTATATAAAAACATTTCCAATTAACTCTTTTGTTATTCTTTATACGAAAAGCATTGCTTGTAGTTTTGCTTTGTGATGACTGATGCCTCATAATGTTTAACAAGTTTGGTCGTCCTTGTTTTGTCTACCGTTCTACTTATTACTTATTATTGTTGTTTGTTTTCTTAAGGAGATTTCATCCATTAATTAGAGAACAAGAAGAAGTTTTGTTGAGTATAAAATTTCAAGTCAATCACATATTTTTTGTCTTATTTAAGCTTCTATCGCGTAGATACATATTTTTTTTTTTTTTTTTTTTGAGGCATTTAGAAGAAATCAACTGATGTGGATCTTGAATTGAAATGAACTTCCTTAATTCTCGTGTGTAAGCACAAACATCTCACATGGATGTGTTGGAATTAATTCTCTTTGTTGGTTCAAGCTAAGATTCTTGAAGACTTATACTATGTATTCTTTCTTGAGTGATGACTGAGAATAATTCCAGAATGGTAGCTTCTTTGCTTCTTATTTCTCCTCCACCGAAACCACTTCTTTCTCTTTTGTTTTCTTTTTCTCCTTAGGTTGATGGCAATTAATGATGAAAGGGATCGATGCGAGAGTGATACTGCTTGTAATTTGCTAAGAAAGGCCAAGTTGGAAGTAAGTTTTGATATTTCTACGTTGTTTTTGGCTTAAACAAGATAATGCTTTTGCTCATTCCTCATTGTTTGGATGAGGTGCTTTGTTCAGTATACAAACAACGTACTATTGCTTTCTCGTTCCCCATCTTACTAAAAATTTTAATTTATCAGATTCCAACCCACCTATCAATTTATATGTTTTTTCAGTTTTTCTGTTTTATAATTACTAAATGTATAAATTTGGGTTATGATAAGCTTAGATAATATAATTGTGTTTCGAGGAAGAATATAATCACTAATAAAAGCAATACAAGTTATTGTTAACCATGCCTCTATATTATTATCAATTTCATAGATTTTTCCAAAAGTTTGACAGCAACATTATTTGTTCTCATCTCATAAGTTCTTTTGATTTTCTCTTTAAAAATTTGTTAAGTTACAAAACGTCAGCATTCCTTCTTGGCTACATGCCAACCTCTTTAGAGCTTCTTCACATTTCCTAAATGCCTAGCTTTCTTGCCTAGCATACTCTTGACCATCTGTCTTAGTCAAAATTAAAAATTACATAAATTTGCAATACCTATCATCATTCAATCGGGAACAAATAATATATATCGTTAGAATTAATGGACTTGGCCCTTTGAGTATTTTTGGAAAGTATATGGAAGATTTTCCCTAGTTCCTAAATCTTTCCTTCTTTTACTCCTTATTGTATCCTTCCTCCCTCACTGTACCTATTGTATTCAATAGAATAATAAGAAGCAAAATATTGTGATTTTTCTCCGTTCTCAATAATCATGAGTTAAGGACAACGTGATGTACCATGACCAAGTCAATTTTTAAAAGGTTGTCATTTTTTACTACAGGGATAGATTTTCTCTCAATATATAAATGAGAGTGTGTAAAGAGCAAAACATATATTCCTTCACTATTTTCAAATTGGGGTAACTCTATTCTTGACTCTTGAGTTGTCTCCAAGACTTGAAGTTCTCAAGAGTTGTAGTGTAAATGGCCGATGCAAACAATATTATTTCCAGGTTGGTTTTCTTGTTTTCATTTTTATTTCTCTAATTATATTTCTAGGTTACAACCTTTACTTGTAGGAATTATTTGGTATCAGAGAGTTTTCTTTTTCTTTCTTAAAAATATTTTCTTTTTTAACAAGTATGTCTCTTGAGTTCTAACAAGTACACAAGTAAGAATTTCAATTTCACGCCTCATTTAGAATATAGAAAGAAACAAGGACTTGTGTTGAACATTGTAGAACTTGTTTTAATTGAACTCGAAAAGTTTGTGAACTGAACTCCTTTCTTTCTTCATGGTTGAAGATGAAGTCGTGTTGTTATATGATTTACATGCAGGACAAGCTCGAAAGATCAAGAACACCCAAAAATTGTACTACGAGTTGAGTTTCTCATTTCATCTATAATAGCTGTCTGCCTCGATGTTTTGTTCTTCTACATCTACAACATAGACAATCAGAAAAATTGCATTGTCGTAGACAGAAAAATAAAGAACGTGGCCCTTAGGGCCAGGTCGGTAACGGACTTCATCCTTCTACTCGAAGTCGCCTACAAGGTCTGTCCAAGTTCAATACTTGAGTTATGTCCCAATTCTAAAACGAATGCGGCTACTCTGACTTTCTTCGGACGTCTTGCTGATGTTAGCAAAAGGGTTCCATGGATGGATGTCCTTGTCGACTTTTTGGCTTTGCTTCCCCTTCCACAAGTTCTTCTTCAATAGTTTATGTGATTCTTATACTCGTAACACTTTTGATCTTCACTTCTAGTTAATTTGTCTAGAACATTCAGTTTTGTCATGGACTCTTAAGATTTATATAGAAGAGATACAATTCAAATCTTAAGATTTATTA

mRNA sequence

TTCCCCGCACCCACGACTCTTCTTGCAAAGACGTAACCGTAGCACCGCCGCCACACGTCATCGTCCCTCGCTAATCTCGTTCTCCATCGGGTCACTCCTTCACTTTCACGTCCATCTTTGCCGCTGTCACCACCTCTCTTGGCAAGGCAAGTTTTAACAACGTCTCCGGGTCCTCCTACGACGTCATTCTGTTCAAAGCACGTCCTCTTTTCCCTTGAAGTAGATCTAGCACTGCTGGATGACCTCTTTCATCCCCGTCAAAGTAGATCCAAGAATGTGAAGTTTGGTTGATGGCAATTAATGATGAAAGGGATCGATGCGAGAGTGATACTGCTTGTAATTTGCTAAGAAAGGCCAAGTTGGAAGGATAGATTTTCTCTCAATATATAAATGAGAGTGTGTAAAGAGCAAAACATATATTCCTTCACTATTTTCAAATTGGGGTAACTCTATTCTTGACTCTTGAGTTGTCTCCAAGACTTGAAGTTCTCAAGAGTTGTAGTGTAAATGGCCGATGCAAACAATATTATTTCCAGGACAAGCTCGAAAGATCAAGAACACCCAAAAATTGTACTACGAGTTGAGTTTCTCATTTCATCTATAATAGCTGTCTGCCTCGATGTTTTGTTCTTCTACATCTACAACATAGACAATCAGAAAAATTGCATTGTCGTAGACAGAAAAATAAAGAACGTGGCCCTTAGGGCCAGGTCGGTAACGGACTTCATCCTTCTACTCGAAGTCGCCTACAAGGTCTGTCCAAGTTCAATACTTGAGTTATGTCCCAATTCTAAAACGAATGCGGCTACTCTGACTTTCTTCGGACGTCTTGCTGATGTTAGCAAAAGGGTTCCATGGATGGATGTCCTTGTCGACTTTTTGGCTTTGCTTCCCCTTCCACAAGTTCTTCTTCAATAGTTTATGTGATTCTTATACTCGTAACACTTTTGATCTTCACTTCTAGTTAATTTGTCTAGAACATTCAGTTTTGTCATGGACTCTTAAGATTTATATAGAAGAGATACAATTCAAATCTTAAGATTTATTA

Coding sequence (CDS)

ATGGCCGATGCAAACAATATTATTTCCAGGACAAGCTCGAAAGATCAAGAACACCCAAAAATTGTACTACGAGTTGAGTTTCTCATTTCATCTATAATAGCTGTCTGCCTCGATGTTTTGTTCTTCTACATCTACAACATAGACAATCAGAAAAATTGCATTGTCGTAGACAGAAAAATAAAGAACGTGGCCCTTAGGGCCAGGTCGGTAACGGACTTCATCCTTCTACTCGAAGTCGCCTACAAGGTCTGTCCAAGTTCAATACTTGAGTTATGTCCCAATTCTAAAACGAATGCGGCTACTCTGACTTTCTTCGGACGTCTTGCTGATGTTAGCAAAAGGGTTCCATGGATGGATGTCCTTGTCGACTTTTTGGCTTTGCTTCCCCTTCCACAAGTTCTTCTTCAATAG

Protein sequence

MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDVLVDFLALLPLPQVLLQ

Homology

[Close]

BLAST of MELO.jh010066.1 vs. NCBI nr
Match: XP_016900693.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo] >TYK21168.1 cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (641), Expect = 1.71e-78
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MADANNIISRTSSKDQEHPKIVLRV FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI
Sbjct: 1   MADANNIISRTSSKDQEHPKIVLRVGFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV
Sbjct: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120

Query: 121 LVDFLALLPLPQVLL 135
           LVDFLALLPLPQ++L
Sbjct: 121 LVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. NCBI nr
Match: XP_008449547.1 (PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 251 bits (641), Expect = 1.88e-78
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MADANNIISRTSSKDQEHPKIVLRV FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI
Sbjct: 1   MADANNIISRTSSKDQEHPKIVLRVGFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV
Sbjct: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120

Query: 121 LVDFLALLPLPQVLL 135
           LVDFLALLPLPQ++L
Sbjct: 121 LVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. NCBI nr
Match: KAA0061693.1 (cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 251 bits (641), Expect = 1.93e-78
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MADANNIISRTSSKDQEHPKIVLRV FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI
Sbjct: 1   MADANNIISRTSSKDQEHPKIVLRVGFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV
Sbjct: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120

Query: 121 LVDFLALLPLPQVLL 135
           LVDFLALLPLPQ++L
Sbjct: 121 LVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. NCBI nr
Match: XP_011651603.1 (cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus] >KAE8650813.1 hypothetical protein Csa_017631 [Cucumis sativus])

HSP 1 Score: 206 bits (524), Expect = 5.09e-61
Identity = 109/135 (80.74%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MA+ANNI SRTSS+DQEH K VLR  FLISSIIAVCLDVLFFYIY ID+Q+ C  VD+KI
Sbjct: 1   MANANNITSRTSSEDQEHTKFVLRFGFLISSIIAVCLDVLFFYIYYIDDQRKCFAVDKKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KN A+ AR+VTDFILLLEVAYKV  SSILELCPNSKTN A LTFFGRLADVSKRVPWM V
Sbjct: 61  KNAAIGARTVTDFILLLEVAYKVYSSSILELCPNSKTNVAPLTFFGRLADVSKRVPWMSV 120

Query: 121 LVDFLALLPLPQVLL 135
           +VDFLALLPLPQ++L
Sbjct: 121 IVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. NCBI nr
Match: XP_038886621.1 (cyclic nucleotide-gated ion channel 1-like [Benincasa hispida])

HSP 1 Score: 149 bits (375), Expect = 4.69e-39
Identity = 82/124 (66.13%), Postives = 96/124 (77.42%), Query Frame = 0


Query: 12  SSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVT 71
           S K+QE  K VL+V FLISSI AVCLDVLFFYI+ ID++K C  VD K+KN A+ ARSVT
Sbjct: 65  SLKNQERRKFVLQVGFLISSITAVCLDVLFFYIHYIDDEKKCFAVDDKVKNAAIAARSVT 124

Query: 72  DFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDVLVDFLALLPLP 131
           D ILLLEV YK+C SSIL+ C      A   TFFGRLADV KRVPWM+V+VD LALLPLP
Sbjct: 125 DSILLLEVIYKICSSSILQQC------ATHQTFFGRLADVGKRVPWMNVIVDLLALLPLP 182

Query: 132 QVLL 135
           Q+++
Sbjct: 185 QIIM 182

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy Swiss-Prot
Match: Q9FXH6 (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 GN=CNGC8 PE=3 SV=2)

HSP 1 Score: 58.2 bits (139), Expect = 8.7e-08
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 27  FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPS 86
           F+IS I+AV +D LFFY+  +DN KNCI +D K+       R++ D   L  +A +   +
Sbjct: 112 FVISCILAVSVDPLFFYLPIVDNSKNCIGIDSKLAVTTTTLRTIIDVFYLTRMALQFRTA 171

Query: 87  SILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALLPLPQV 134
            I    P+S+        FGR       A +++R      +VDFLA+LPLPQ+
Sbjct: 172 YI---APSSRV-------FGRGELVIDPAKIAERYLTRYFIVDFLAVLPLPQI 214

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy Swiss-Prot
Match: O65717 (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 PE=1 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.3e-07
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 27  FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPS 86
           F+++ IIAV LD LFFY+  ID+ K C+ +D+K++  A   RS TD   +L + ++    
Sbjct: 99  FVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLRSFTDVFYVLHIIFQFRTG 158

Query: 87  SILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALLPLPQVLL 136
            I    P+S+        FGR        +++KR      ++D LA+LPLPQ+++
Sbjct: 159 FI---APSSRV-------FGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQMVI 203

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy Swiss-Prot
Match: Q9M0A4 (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 GN=CNGC9 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05
Identity = 36/115 (31.30%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 27  FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPS 86
           F+ S I+AV +D LF Y+  + + + CI +DRK+  +A   R+V D   L  +A +   +
Sbjct: 118 FVTSCILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTA 177

Query: 87  SILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALLPLPQVLL 136
            +    P+S+        FGR       A ++KR      ++DFL++LPLPQ+++
Sbjct: 178 FV---APSSRV-------FGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVV 222

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy Swiss-Prot
Match: Q9LNJ0 (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 GN=CNGC10 PE=2 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-05
Identity = 37/134 (27.61%), Postives = 71/134 (52.99%), Query Frame = 0


Query: 6   NIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVAL 65
           NII+   S  Q   KI     FL + ++A+ +D LFFYI  +D+ ++C+ +D K++  A 
Sbjct: 67  NIINPQDSFLQNWNKI-----FLFACVVALAIDPLFFYIPIVDSARHCLTLDSKLEIAAS 126

Query: 66  RARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV----L 125
             R++ D   ++ + ++   + I    P+S+         G L D +K +    +    +
Sbjct: 127 LLRTLIDAFYIIHIVFQFRTAYI---APSSRVFGR-----GELVDDAKAIALKYLSSYFI 186

Query: 126 VDFLALLPLPQVLL 136
           +D L++LPLPQ+++
Sbjct: 187 IDLLSILPLPQIVV 187

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy Swiss-Prot
Match: Q9S9N5 (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 GN=CNGC7 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.8e-05
Identity = 41/125 (32.80%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 16  QEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQ-KNCIVVDRKIKNVALRARSVTDFI 75
           Q+   +V    F+IS I+AV +D LFFY+  +DN   +CI +D K+       R++ D  
Sbjct: 94  QDKTLLVWNRLFVISCILAVSVDPLFFYLPIVDNSGSSCIGIDTKLAVTTTTLRTIVDVF 153

Query: 76  LLLEVAYKVCPSSILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALL 134
            L  +A +   + I    P+S+        FGR       A +++R      +VDFLA+L
Sbjct: 154 YLTRMALQFRTAYI---APSSRV-------FGRGELVIDPAKIAERYLTRYFVVDFLAVL 208

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy TrEMBL
Match: A0A5D3DCD7 (Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00390 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 8.27e-79
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MADANNIISRTSSKDQEHPKIVLRV FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI
Sbjct: 1   MADANNIISRTSSKDQEHPKIVLRVGFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV
Sbjct: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120

Query: 121 LVDFLALLPLPQVLL 135
           LVDFLALLPLPQ++L
Sbjct: 121 LVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy TrEMBL
Match: A0A1S4DXJ0 (cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 8.27e-79
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MADANNIISRTSSKDQEHPKIVLRV FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI
Sbjct: 1   MADANNIISRTSSKDQEHPKIVLRVGFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV
Sbjct: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120

Query: 121 LVDFLALLPLPQVLL 135
           LVDFLALLPLPQ++L
Sbjct: 121 LVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy TrEMBL
Match: A0A1S3BLM4 (cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103491398 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 9.11e-79
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MADANNIISRTSSKDQEHPKIVLRV FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI
Sbjct: 1   MADANNIISRTSSKDQEHPKIVLRVGFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV
Sbjct: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120

Query: 121 LVDFLALLPLPQVLL 135
           LVDFLALLPLPQ++L
Sbjct: 121 LVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy TrEMBL
Match: A0A5A7V0L3 (Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00660 PE=4 SV=1)

HSP 1 Score: 251 bits (641), Expect = 9.34e-79
Identity = 132/135 (97.78%), Postives = 134/135 (99.26%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MADANNIISRTSSKDQEHPKIVLRV FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI
Sbjct: 1   MADANNIISRTSSKDQEHPKIVLRVGFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV
Sbjct: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120

Query: 121 LVDFLALLPLPQVLL 135
           LVDFLALLPLPQ++L
Sbjct: 121 LVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. ExPASy TrEMBL
Match: A0A0A0L8V1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G606620 PE=4 SV=1)

HSP 1 Score: 206 bits (524), Expect = 9.82e-64
Identity = 109/135 (80.74%), Postives = 119/135 (88.15%), Query Frame = 0


Query: 1   MADANNIISRTSSKDQEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKI 60
           MA+ANNI SRTSS+DQEH K VLR  FLISSIIAVCLDVLFFYIY ID+Q+ C  VD+KI
Sbjct: 1   MANANNITSRTSSEDQEHTKFVLRFGFLISSIIAVCLDVLFFYIYYIDDQRKCFAVDKKI 60

Query: 61  KNVALRARSVTDFILLLEVAYKVCPSSILELCPNSKTNAATLTFFGRLADVSKRVPWMDV 120
           KN A+ AR+VTDFILLLEVAYKV  SSILELCPNSKTN A LTFFGRLADVSKRVPWM V
Sbjct: 61  KNAAIGARTVTDFILLLEVAYKVYSSSILELCPNSKTNVAPLTFFGRLADVSKRVPWMSV 120

Query: 121 LVDFLALLPLPQVLL 135
           +VDFLALLPLPQ++L
Sbjct: 121 IVDFLALLPLPQIIL 135

[Close]

BLAST of MELO.jh010066.1 vs. TAIR 10
Match: AT1G19780.1 (cyclic nucleotide gated channel 8 )

HSP 1 Score: 58.2 bits (139), Expect = 6.2e-09
Identity = 41/113 (36.28%), Postives = 61/113 (53.98%), Query Frame = 0


Query: 27  FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPS 86
           F+IS I+AV +D LFFY+  +DN KNCI +D K+       R++ D   L  +A +   +
Sbjct: 112 FVISCILAVSVDPLFFYLPIVDNSKNCIGIDSKLAVTTTTLRTIIDVFYLTRMALQFRTA 171

Query: 87  SILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALLPLPQV 134
            I    P+S+        FGR       A +++R      +VDFLA+LPLPQ+
Sbjct: 172 YI---APSSRV-------FGRGELVIDPAKIAERYLTRYFIVDFLAVLPLPQI 214

[Close]

BLAST of MELO.jh010066.1 vs. TAIR 10
Match: AT5G53130.1 (cyclic nucleotide gated channel 1 )

HSP 1 Score: 56.2 bits (134), Expect = 2.3e-08
Identity = 39/115 (33.91%), Postives = 64/115 (55.65%), Query Frame = 0


Query: 27  FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPS 86
           F+++ IIAV LD LFFY+  ID+ K C+ +D+K++  A   RS TD   +L + ++    
Sbjct: 99  FVLACIIAVSLDPLFFYVPIIDDAKKCLGIDKKMEITASVLRSFTDVFYVLHIIFQFRTG 158

Query: 87  SILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALLPLPQVLL 136
            I    P+S+        FGR        +++KR      ++D LA+LPLPQ+++
Sbjct: 159 FI---APSSRV-------FGRGVLVEDKREIAKRYLSSHFIIDILAVLPLPQMVI 203

[Close]

BLAST of MELO.jh010066.1 vs. TAIR 10
Match: AT4G30560.1 (cyclic nucleotide gated channel 9 )

HSP 1 Score: 51.2 bits (121), Expect = 7.5e-07
Identity = 36/115 (31.30%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 27  FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPS 86
           F+ S I+AV +D LF Y+  + + + CI +DRK+  +A   R+V D   L  +A +   +
Sbjct: 118 FVTSCILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTA 177

Query: 87  SILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALLPLPQVLL 136
            +    P+S+        FGR       A ++KR      ++DFL++LPLPQ+++
Sbjct: 178 FV---APSSRV-------FGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVV 222

[Close]

BLAST of MELO.jh010066.1 vs. TAIR 10
Match: AT4G30560.2 (cyclic nucleotide gated channel 9 )

HSP 1 Score: 51.2 bits (121), Expect = 7.5e-07
Identity = 36/115 (31.30%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 27  FLISSIIAVCLDVLFFYIYNIDNQKNCIVVDRKIKNVALRARSVTDFILLLEVAYKVCPS 86
           F+ S I+AV +D LF Y+  + + + CI +DRK+  +A   R+V D   L  +A +   +
Sbjct: 92  FVTSCILAVSVDPLFLYLPFVKDNEKCIGIDRKLAIIATTLRTVIDAFYLFHMALRFRTA 151

Query: 87  SILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALLPLPQVLL 136
            +    P+S+        FGR       A ++KR      ++DFL++LPLPQ+++
Sbjct: 152 FV---APSSRV-------FGRGELVIDPAQIAKRYLQQYFIIDFLSVLPLPQIVV 196

[Close]

BLAST of MELO.jh010066.1 vs. TAIR 10
Match: AT1G15990.1 (cyclic nucleotide gated channel 7 )

HSP 1 Score: 50.4 bits (119), Expect = 1.3e-06
Identity = 41/125 (32.80%), Postives = 64/125 (51.20%), Query Frame = 0


Query: 16  QEHPKIVLRVEFLISSIIAVCLDVLFFYIYNIDNQ-KNCIVVDRKIKNVALRARSVTDFI 75
           Q+   +V    F+IS I+AV +D LFFY+  +DN   +CI +D K+       R++ D  
Sbjct: 65  QDKTLLVWNRLFVISCILAVSVDPLFFYLPIVDNSGSSCIGIDTKLAVTTTTLRTIVDVF 124

Query: 76  LLLEVAYKVCPSSILELCPNSKTNAATLTFFGR------LADVSKRVPWMDVLVDFLALL 134
            L  +A +   + I    P+S+        FGR       A +++R      +VDFLA+L
Sbjct: 125 YLTRMALQFRTAYI---APSSRV-------FGRGELVIDPAKIAERYLTRYFVVDFLAVL 179

The following BLAST results are available for this feature:

BLAST of MELO.jh010066.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016900693.1	1.71e-78	97.78	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X2 [Cucumis melo] ...	[more]
XP_008449547.1	1.88e-78	97.78	PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo]	[more]
KAA0061693.1	1.93e-78	97.78	cyclic nucleotide-gated ion channel 1-like isoform X1 [Cucumis melo var. makuwa]	[more]
XP_011651603.1	5.09e-61	80.74	cyclic nucleotide-gated ion channel 1 isoform X1 [Cucumis sativus] >KAE8650813.1...	[more]
XP_038886621.1	4.69e-39	66.13	cyclic nucleotide-gated ion channel 1-like [Benincasa hispida]	[more]

BLAST of MELO.jh010066.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FXH6	8.7e-08	36.28	Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana OX=3702 G...	[more]
O65717	3.3e-07	33.91	Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana OX=3702 GN=CNGC1 P...	[more]
Q9M0A4	1.1e-05	31.30	Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana OX=3702 G...	[more]
Q9LNJ0	1.8e-05	27.61	Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana OX=3702 ...	[more]
Q9S9N5	1.8e-05	32.80	Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of MELO.jh010066.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DCD7	8.27e-79	97.78	Cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo var. makuw...	[more]
A0A1S4DXJ0	8.27e-79	97.78	cyclic nucleotide-gated ion channel 1-like isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
A0A1S3BLM4	9.11e-79	97.78	cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo OX=3656 GN...	[more]
A0A5A7V0L3	9.34e-79	97.78	Cyclic nucleotide-gated ion channel 1-like isoform X1 OS=Cucumis melo var. makuw...	[more]
A0A0A0L8V1	9.82e-64	80.74	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G606620 PE=4 SV=1	[more]

BLAST of MELO.jh010066.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G19780.1	6.2e-09	36.28	cyclic nucleotide gated channel 8	[more]
AT5G53130.1	2.3e-08	33.91	cyclic nucleotide gated channel 1	[more]
AT4G30560.1	7.5e-07	31.30	cyclic nucleotide gated channel 9	[more]
AT4G30560.2	7.5e-07	31.30	cyclic nucleotide gated channel 9	[more]
AT1G15990.1	1.3e-06	32.80	cyclic nucleotide gated channel 7	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR45651:SF65	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 1-LIKE	coord: 19..134
None	No IPR available	PANTHER	PTHR45651	CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED	coord: 19..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh010066.1.t1	MELO.jh010066.1.t1	mRNA