MELO.jh009661.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh009661.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionSteroid 5-alpha-reductase
Locationchr04: 33512790 .. 33513629 (+)
RNA-Seq ExpressionMELO.jh009661.1
SyntenyMELO.jh009661.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CCCAGCCCAGCCACTCCATAATCTCTCCCAAATAGTTAGGACAACTCACCAACTCAAACCACCCTCCCTTCGGCACCTTATAACCGCCGCCGCTCCTCTTCAGTCCGACCAGAACACCATCCGACCATATATTCACCGCCATCCCCATCACAAAAACCACTCCTCCACCAAAAAACCGCCACCAAAACCACCCATCTCCCTCGTACTTCACGTAATGAGACACAGATCTGGTCTGCACGTAAGCATTGAGCAAGTTGAATCCGAATGCCATGATAGCCACAATCACCGGAAAACCGGCGGTGGCATTCCGTCGAGTCCCACTCCAGAGAAGACGAATTGGGTAGAAGCAGGTGCGATTGAGGTAGTGAAGGAGGAAGGGGGAGATGAGAAGGAGAGCCTTGGAATCGGAGGAGTGATCGCCGGATGGAAAGAGGAGGAGGGTCAACCATAAGGTGGGACTTTCCATCAGGAACCAGGCCAATGGAGCCGACATGGTTGGACCCCACCCGGGTCGGATGTGCTTCCCGTACGGCGCCTGGAGAAACCTCAGGGAGACGACGGTCGGTGGTCCAATGAGGTACAGGGCGAGAAGACTGTTGCGGAACAGAGCCTGATCCCAACCCATCACGGTAGGCGATGGATTCGAGGATTCCGGTTGTAGGTTTGAATCAAGTTGAGAAATTTGTGGCTGATCTGTTTTCAAATTTGTAACATATCTCATTAAAATCCAGATCTACATACCTAAAAGGAAGAAGCTGACAGAGGGAAGGAAGCCTATTGAATCTCATAGTGAAGTCACCTTCTCCACTATGGTAATAGACTTGGGACACTTTTTGGTGA

mRNA sequence

CCCAGCCCAGCCACTCCATAATCTCTCCCAAATAGTTAGGACAACTCACCAACTCAAACCACCCTCCCTTCGGCACCTTATAACCGCCGCCGCTCCTCTTCAGTCCGACCAGAACACCATCCGACCATATATTCACCGCCATCCCCATCACAAAAACCACTCCTCCACCAAAAAACCGCCACCAAAACCACCCATCTCCCTCGTACTTCACGTAATGAGACACAGATCTGGTCTGCACGTAAGCATTGAGCAAGTTGAATCCGAATGCCATGATAGCCACAATCACCGGAAAACCGGCGGTGGCATTCCGTCGAGTCCCACTCCAGAGAAGACGAATTGGGTAGAAGCAGGTGCGATTGAGGTAGTGAAGGAGGAAGGGGGAGATGAGAAGGAGAGCCTTGGAATCGGAGGAGTGATCGCCGGATGGAAAGAGGAGGAGGGTCAACCATAAGGTGGGACTTTCCATCAGGAACCAGGCCAATGGAGCCGACATGGTTGGACCCCACCCGGGTCGGATGTGCTTCCCGTACGGCGCCTGGAGAAACCTCAGGGAGACGACGGTCGGTGGTCCAATGAGGTACAGGGCGAGAAGACTGTTGCGGAACAGAGCCTGATCCCAACCCATCACGGTAGGCGATGGATTCGAGGATTCCGGTTGTAGGTTTGAATCAAGTTGAGAAATTTGTGGCTGATCTGTTTTCAAATTTGTAACATATCTCATTAAAATCCAGATCTACATACCTAAAAGGAAGAAGCTGACAGAGGGAAGGAAGCCTATTGAATCTCATAGTGAAGTCACCTTCTCCACTATGGTAATAGACTTGGGACACTTTTTGGTGA

Coding sequence (CDS)

ATGAGACACAGATCTGGTCTGCACGTAAGCATTGAGCAAGTTGAATCCGAATGCCATGATAGCCACAATCACCGGAAAACCGGCGGTGGCATTCCGTCGAGTCCCACTCCAGAGAAGACGAATTGGGTAGAAGCAGGTGCGATTGAGGTAGTGAAGGAGGAAGGGGGAGATGAGAAGGAGAGCCTTGGAATCGGAGGAGTGATCGCCGGATGGAAAGAGGAGGAGGGTCAACCATAA

Protein sequence

MRHRSGLHVSIEQVESECHDSHNHRKTGGGIPSSPTPEKTNWVEAGAIEVVKEEGGDEKESLGIGGVIAGWKEEEGQP
Homology
BLAST of MELO.jh009661.1 vs. NCBI nr
Match: PSS34627.1 (Steroid 5-alpha-reductase [Actinidia chinensis var. chinensis])

HSP 1 Score: 61.2 bits (147), Expect = 6.36e-09
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 4   RSGLHVSIEQVESECHDSHNHRKTGGGIPSSPTPEKTNWVEAGAIEVVKEEGGDEKESLG 63
           RS L V + +VE E       R+TG G P++   E    VE GA+EVV+EEGGDE+    
Sbjct: 103 RSRLQVGVPEVEEEGQCGDGDRETGRGFPAAVEAE---GVEDGAVEVVEEEGGDEELGFW 162

Query: 64  IGGVIAGWKEEEGQP 78
            G V A W+EEEG+P
Sbjct: 163 AGPVTAHWEEEEGEP 174

BLAST of MELO.jh009661.1 vs. NCBI nr
Match: PON36926.1 (hypothetical protein PanWU01x14_324790, partial [Parasponia andersonii])

HSP 1 Score: 56.6 bits (135), Expect = 1.44e-07
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0

Query: 1   MRHRSGLHVSIEQVESECHDSHNHRKTGGG-IPSSPTPEKTNWVEAGAIEVVKEEGGDEK 60
           +R  SGL V I++VESE  + H   +TGG  +   PT E     EA ++EVV++E  DE 
Sbjct: 89  VRDPSGLQVGIQEVESEGQNRHGDWETGGDFLMGGPTVEAKR-EEASSVEVVEKEDTDES 148

Query: 61  ESLGIGGVIAGWKEEEGQP 78
           E  GIG V +  +EEEG+P
Sbjct: 149 EGFGIGAVDSKGEEEEGEP 166

BLAST of MELO.jh009661.1 vs. NCBI nr
Match: PON36912.1 (hypothetical protein PanWU01x14_324650 [Parasponia andersonii])

HSP 1 Score: 54.7 bits (130), Expect = 1.31e-06
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 0

Query: 1   MRHRSGLHVSIEQVESECHDSHNHRKTGGGIPSSPTPEKTNWVEAGAIEVVKEEGGDEKE 60
           +R  SGL V I++VESE  + H +R+  GG P      +    +AG +++++EE GDE E
Sbjct: 84  VRDPSGLQVGIQEVESEGQNYHGNREIRGGFPIGDLAMEVEQEQAGLVKLMEEEVGDESE 143

Query: 61  SLGIGGVIAGWKEEEGQP 78
              I  + +  +EEEG+P
Sbjct: 144 GFRIRAMDSQGEEEEGEP 161

BLAST of MELO.jh009661.1 vs. NCBI nr
Match: GER55828.1 (hypothetical protein STAS_33529 [Striga asiatica])

HSP 1 Score: 55.1 bits (131), Expect = 1.64e-06
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 1   MRHRSGLHVSIEQVESECHDSHNHRKTGGGIPSSPTPE-KTNWVEAGAIEVVKEEGGDEK 60
           +RH   L V ++QVE E H     R+ G    ++   E +   V+ GA+EVV+EEGGDE 
Sbjct: 256 LRHPPRLQVGVQQVEHERHRRDAGREPGSAAAAAAGLEVEAEGVDEGAVEVVEEEGGDEG 315

Query: 61  ESLGIGGVIAGWKEEEGQP 78
           E  G+  V A  +EE+G+P
Sbjct: 316 EGAGVAAVPAVGEEEKGEP 334

BLAST of MELO.jh009661.1 vs. ExPASy TrEMBL
Match: A0A2R6RX83 (Steroid 5-alpha-reductase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc01731 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 3.08e-09
Identity = 35/75 (46.67%), Postives = 45/75 (60.00%), Query Frame = 0

Query: 4   RSGLHVSIEQVESECHDSHNHRKTGGGIPSSPTPEKTNWVEAGAIEVVKEEGGDEKESLG 63
           RS L V + +VE E       R+TG G P++   E    VE GA+EVV+EEGGDE+    
Sbjct: 103 RSRLQVGVPEVEEEGQCGDGDRETGRGFPAAVEAE---GVEDGAVEVVEEEGGDEELGFW 162

Query: 64  IGGVIAGWKEEEGQP 78
            G V A W+EEEG+P
Sbjct: 163 AGPVTAHWEEEEGEP 174

BLAST of MELO.jh009661.1 vs. ExPASy TrEMBL
Match: A0A2P5AK47 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_324790 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 6.96e-08
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = 0

Query: 1   MRHRSGLHVSIEQVESECHDSHNHRKTGGG-IPSSPTPEKTNWVEAGAIEVVKEEGGDEK 60
           +R  SGL V I++VESE  + H   +TGG  +   PT E     EA ++EVV++E  DE 
Sbjct: 89  VRDPSGLQVGIQEVESEGQNRHGDWETGGDFLMGGPTVEAKR-EEASSVEVVEKEDTDES 148

Query: 61  ESLGIGGVIAGWKEEEGQP 78
           E  GIG V +  +EEEG+P
Sbjct: 149 EGFGIGAVDSKGEEEEGEP 166

BLAST of MELO.jh009661.1 vs. ExPASy TrEMBL
Match: A0A2P5AK40 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_324650 PE=4 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 6.36e-07
Identity = 29/78 (37.18%), Postives = 46/78 (58.97%), Query Frame = 0

Query: 1   MRHRSGLHVSIEQVESECHDSHNHRKTGGGIPSSPTPEKTNWVEAGAIEVVKEEGGDEKE 60
           +R  SGL V I++VESE  + H +R+  GG P      +    +AG +++++EE GDE E
Sbjct: 84  VRDPSGLQVGIQEVESEGQNYHGNREIRGGFPIGDLAMEVEQEQAGLVKLMEEEVGDESE 143

Query: 61  SLGIGGVIAGWKEEEGQP 78
              I  + +  +EEEG+P
Sbjct: 144 GFRIRAMDSQGEEEEGEP 161

BLAST of MELO.jh009661.1 vs. ExPASy TrEMBL
Match: A0A5A7RF70 (Uncharacterized protein OS=Striga asiatica OX=4170 GN=STAS_33529 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 7.96e-07
Identity = 32/79 (40.51%), Postives = 46/79 (58.23%), Query Frame = 0

Query: 1   MRHRSGLHVSIEQVESECHDSHNHRKTGGGIPSSPTPE-KTNWVEAGAIEVVKEEGGDEK 60
           +RH   L V ++QVE E H     R+ G    ++   E +   V+ GA+EVV+EEGGDE 
Sbjct: 256 LRHPPRLQVGVQQVEHERHRRDAGREPGSAAAAAAGLEVEAEGVDEGAVEVVEEEGGDEG 315

Query: 61  ESLGIGGVIAGWKEEEGQP 78
           E  G+  V A  +EE+G+P
Sbjct: 316 EGAGVAAVPAVGEEEKGEP 334

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PSS34627.16.36e-0946.67Steroid 5-alpha-reductase [Actinidia chinensis var. chinensis][more]
PON36926.11.44e-0744.30hypothetical protein PanWU01x14_324790, partial [Parasponia andersonii][more]
PON36912.11.31e-0637.18hypothetical protein PanWU01x14_324650 [Parasponia andersonii][more]
GER55828.11.64e-0640.51hypothetical protein STAS_33529 [Striga asiatica][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2R6RX833.08e-0946.67Steroid 5-alpha-reductase OS=Actinidia chinensis var. chinensis OX=1590841 GN=CE... [more]
A0A2P5AK476.96e-0844.30Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5AK406.36e-0737.18Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_324650 PE... [more]
A0A5A7RF707.96e-0740.51Uncharacterized protein OS=Striga asiatica OX=4170 GN=STAS_33529 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 54..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..41

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh009661.1.t1MELO.jh009661.1.t1mRNA