MELO.jh009507.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh009507.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr04: 32649479 .. 32652082 (-)
RNA-Seq ExpressionMELO.jh009507.1
SyntenyMELO.jh009507.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
CATGCCGTTGAGATCGGACACGCTGTCTTGTAGAGTGAGAAGCAAATGAGCGGTACTGAAGCTCGTTGACGGTTTAGACCGAGGCACGATCGGAATCTCCGAATCACCGATTAACATTTGCACTACGCCTCTCATTGTGGGTCGGGTCATTGGATCCGGGTGAGAACAAGCTAACCCAACTAACAAAACTTTCCTCATTTCTGATTCCTCAAACTCGCCGCCCAGTCTTCCGTCAGCTGCCGTCAACAACCGTCCTTCCCGGTGTAAACTCCAAACCCAGTCCACCAAATTACTGTTGGCACCAAATTTTCCGCCGCCGCCAACTGCGGTGGTCTCTTTCTCAATCGGCCGTCTGCCACTAGCCACTTCGAGAACGACGGCGCCAAAGCTAAACACGTCGGTTTTTTCCGTAGCTCGTCCGGTGAGGAGATATTCCGGCGCTAGGTAACCCATTGTGCCAGCCGCGACGGTGGCGTCTGGGGATTTATCGTGCTCTACTTGTCGGGCTAATCCGAAATCGCCTAATCGGGCATTGAATCCTTCATCCAACATTATGTTGCTGGTTTTAACGTCCCTGTGAATGACTTGATTTTCACATTCTTGATGCAAATAGGCTAAAGCGGAAGCGACGCCCAGAAGGATTTTTCTCCGGTGAGGCCACGGCAGCGGTGTTCTAGCCTCGAATAGAGCTTTATCTAAACTCCCATTTGGCATTAAATCGTAAACGAGTAAAATTTCGCCTTTCTCGTGACACCATCCTTGAAGACGGACTAAATTCCGGTGGCGGAGAGTTCCGATGATTGAAAGTTCAGATAGGAATTCATTTTTCCCTTGTGTACTATGGCTACACCGTTTCACCGCCACAATGTCGCCGGTTTCCGGAAGAATCCCTTTATAAACAGTCCCAAAAGCTCCATGGCCGATGATTCTGTTCGAATTGAAGCATTTGGTGGCGATTTTGAGCTCCTTGTAAGTGAATTCCTTAGGCATTTTGATGATTTCTGAAGCGAGGGAATCCGATTTTTTAACCCGCTTGATCTTTTTGGAATATACCCAAATTAACGCGCCGGCGAATAATGCTAGAACAAATGCCCCCGCCGTCACAACTCCGACCACCGCGCCAGCGCCTTGCTTGCAGAGCCCATTGTGGCAGGACGTGGACTTGGAGTTCTTTTGCGTGATGGAATCTGAACCGGATGGCGGTTGCGACGGCGGCGGTGAACGAACGACATTTGCCGTTGGGTTCATCAGCGTCGTCGTTGGCGGCGGCGGAACCGACCCTGATGACGAATCTGAGTCAAATGACGACGTAAAGCTCCACCAGTCCACACTGTGAACTTCCGTACTCCCCTGTGTCGAACCGGAAAATCCAACGTACATAAAATCGTTCAAATACGGATCAAGGTCGAGATTGAACGACATTAGAGGTTCTGTCGGTTTCAAATTCGAATAAGAAACAAATACTTCGAAGATCCGAGCCGACCCGTCGTATTTAATCCATGAATTCACCGTATCGCCGCTTTTAAGATCGACTCCAATTCCCTGAAGATCTTCAACCTCTAACGAAACCATTTCGTTCAGATCCAATCCCACATGGTTTCCATTAATGTCCTTAAATTCCACGTCCATTAACGTATCAAATTCCACCGCCACGAATCCCAATCCCCTCTCGTCAGCCAACCCCAACAACCCACCAGCGCCGCCGAGCGTTTCAGCGTCCGGGGATATAACAAACGCCAAACCACCGCCGATCGACGACGGGTTGAGATTAGTAATGGAGAATGAGAAAAATGTGGAGAAACTAGCGAGGTAATTAATCCCCGGCTGTCGGAATCTGATAGGTTTAGCGTAAAGGACTCTACCGGAGCCGGAATTTGGGACCGCAAGGTCCCGAGTGAGCCTCACGCTCCCGTTGTTCAAGTGGGCATCGCCGAGTAGCTTCAAACTACTGAGTTCAACAGTGCCGAAGTCAAATTCGGCCGCGGCAGCGACGGTGGCGATGAAATCGACAATGACAGTATTGGAAATGGAAAATAGAAGTAATGTGAAGGTAATTGATGAGAATATTGTAGAGAAATTCAACATCATTGATATCAAACTCTGTTCTTCAAACCCATCTCTGGTTTTTCCTTCGCCGGTGAATTGAGGAAGACGATGATGAAATCACGGGGAAGAGAGAGAAAACGAAGAGAGGGAGAATAATGGAATTTTCTTTGGCTTAAAAACGGACTAAACCTCAGCATACAAACAAGGAATACTGAAGAGAATCCAAAGAGAAGAGTGAAGGGGACAAGTGGACTACCGTTCTGACACGTGGCCATCCACAACGGTAAATTTTTCGATGATAAAGCAAACTTTGTTTTTCTTTATATTTTTTTCTTCGTTTCACACCTTTTACAGAGTGGACGGTTTTGTCGCACGTGGCTTTCCTACAGCGCGTGACTTCCACGCTTTAACCTTTTGTGTATACTTAACCACAATGTTAAGCAGATTTTTATCCTTCATTTTGTGGTTAATATTTTTCTGACAATATACCTTGGGATAATCTGATTTTTATTTGATTCTTAGATTCCAAAATAATATATTCATAAATAAGTTTGATTT

mRNA sequence

CATGCCGTTGAGATCGGACACGCTGTCTTGTAGAGTGAGAAGCAAATGAGCGGTACTGAAGCTCGTTGACGGTTTAGACCGAGGCACGATCGGAATCTCCGAATCACCGATTAACATTTGCACTACGCCTCTCATTGTGGGTCGGGTCATTGGATCCGGGTGAGAACAAGCTAACCCAACTAACAAAACTTTCCTCATTTCTGATTCCTCAAACTCGCCGCCCAGTCTTCCGTCAGCTGCCGTCAACAACCGTCCTTCCCGGTGTAAACTCCAAACCCAGTCCACCAAATTACTGTTGGCACCAAATTTTCCGCCGCCGCCAACTGCGGTGGTCTCTTTCTCAATCGGCCGTCTGCCACTAGCCACTTCGAGAACGACGGCGCCAAAGCTAAACACGTCGGTTTTTTCCGTAGCTCGTCCGGTGAGGAGATATTCCGGCGCTAGGTAACCCATTGTGCCAGCCGCGACGGTGGCGTCTGGGGATTTATCGTGCTCTACTTGTCGGGCTAATCCGAAATCGCCTAATCGGGCATTGAATCCTTCATCCAACATTATGTTGCTGGTTTTAACGTCCCTGTGAATGACTTGATTTTCACATTCTTGATGCAAATAGGCTAAAGCGGAAGCGACGCCCAGAAGGATTTTTCTCCGGTGAGGCCACGGCAGCGGTGTTCTAGCCTCGAATAGAGCTTTATCTAAACTCCCATTTGGCATTAAATCGTAAACGAGTAAAATTTCGCCTTTCTCGTGACACCATCCTTGAAGACGGACTAAATTCCGGTGGCGGAGAGTTCCGATGATTGAAAGTTCAGATAGGAATTCATTTTTCCCTTGTGTACTATGGCTACACCGTTTCACCGCCACAATGTCGCCGGTTTCCGGAAGAATCCCTTTATAAACAGTCCCAAAAGCTCCATGGCCGATGATTCTGTTCGAATTGAAGCATTTGGTGGCGATTTTGAGCTCCTTGTAAGTGAATTCCTTAGGCATTTTGATGATTTCTGAAGCGAGGGAATCCGATTTTTTAACCCGCTTGATCTTTTTGGAATATACCCAAATTAACGCGCCGGCGAATAATGCTAGAACAAATGCCCCCGCCGTCACAACTCCGACCACCGCGCCAGCGCCTTGCTTGCAGAGCCCATTGTGGCAGGACGTGGACTTGGAGTTCTTTTGCGTGATGGAATCTGAACCGGATGGCGGTTGCGACGGCGGCGGTGAACGAACGACATTTGCCGTTGGGTTCATCAGCGTCGTCGTTGGCGGCGGCGGAACCGACCCTGATGACGAATCTGAGTCAAATGACGACGTAAAGCTCCACCAGTCCACACTGTGAACTTCCGTACTCCCCTGTGTCGAACCGGAAAATCCAACGTACATAAAATCGTTCAAATACGGATCAAGGTCGAGATTGAACGACATTAGAGGTTCTGTCGGTTTCAAATTCGAATAAGAAACAAATACTTCGAAGATCCGAGCCGACCCGTCGTATTTAATCCATGAATTCACCGTATCGCCGCTTTTAAGATCGACTCCAATTCCCTGAAGATCTTCAACCTCTAACGAAACCATTTCGTTCAGATCCAATCCCACATGGTTTCCATTAATGTCCTTAAATTCCACGTCCATTAACGTATCAAATTCCACCGCCACGAATCCCAATCCCCTCTCGTCAGCCAACCCCAACAACCCACCAGCGCCGCCGAGCGTTTCAGCGTCCGGGGATATAACAAACGCCAAACCACCGCCGATCGACGACGGGTTGAGATTAGTAATGGAGAATGAGAAAAATGTGGAGAAACTAGCGAGGTAATTAATCCCCGGCTGTCGGAATCTGATAGGTTTAGCGTAAAGGACTCTACCGGAGCCGGAATTTGGGACCGCAAGGTCCCGAGTGAGCCTCACGCTCCCGTTGTTCAAGTGGGCATCGCCGAGTAGCTTCAAACTACTGAGTTCAACAGTGCCGAAGTCAAATTCGGCCGCGGCAGCGACGGTGGCGATGAAATCGACAATGACAGTATTGGAAATGGAAAATAGAAGTAATGTGAAGGTAATTGATGAGAATATTGTAGAGAAATTCAACATCATTGATATCAAACTCTGTTCTTCAAACCCATCTCTGGTTTTTCCTTCGCCGGTGAATTGAGGAAGACGATGATGAAATCACGGGGAAGAGAGAGAAAACGAAGAGAGGGAGAATAATGGAATTTTCTTTGGCTTAAAAACGGACTAAACCTCAGCATACAAACAAGGAATACTGAAGAGAATCCAAAGAGAAGAGTGAAGGGGACAAGTGGACTACCGTTCTGACACGTGGCCATCCACAACGGTAAATTTTTCGATGATAAAGCAAACTTTGTTTTTCTTTATATTTTTTTCTTCGTTTCACACCTTTTACAGAGTGGACGGTTTTGTCGCACGTGGCTTTCCTACAGCGCGTGACTTCCACGCTTTAACCTTTTGTGTATACTTAACCACAATGTTAAGCAGATTTTTATCCTTCATTTTGTGGTTAATATTTTTCTGACAATATACCTTGGGATAATCTGATTTTTATTTGATTCTTAGATTCCAAAATAATATATTCATAAATAAGTTTGATTT

Coding sequence (CDS)

ATGATTTCTGAAGCGAGGGAATCCGATTTTTTAACCCGCTTGATCTTTTTGGAATATACCCAAATTAACGCGCCGGCGAATAATGCTAGAACAAATGCCCCCGCCGTCACAACTCCGACCACCGCGCCAGCGCCTTGCTTGCAGAGCCCATTGTGGCAGGACGTGGACTTGGAGTTCTTTTGCGTGATGGAATCTGAACCGGATGGCGGTTGCGACGGCGGCGGTGAACGAACGACATTTGCCGTTGGGTTCATCAGCGTCGTCGTTGGCGGCGGCGGAACCGACCCTGATGACGAATCTGAGTCAAATGACGACGTAAAGCTCCACCAGTCCACACTGTGA

Protein sequence

MISEARESDFLTRLIFLEYTQINAPANNARTNAPAVTTPTTAPAPCLQSPLWQDVDLEFFCVMESEPDGGCDGGGERTTFAVGFISVVVGGGGTDPDDESESNDDVKLHQSTL
Homology
[Close]
BLAST of MELO.jh009507.1 vs. NCBI nr
Match: RXH92890.1 (hypothetical protein DVH24_011914 [Malus domestica])

HSP 1 Score: 63.2 bits (152), Expect = 2.43e-09
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0 

Query: 22  INAPANNARTNAPAVTTPTTAPAPCLQSPLWQDVDLEFFC---VMESEPDGGCDGGGERT 81
           I  PAN A+T A AVTTP TAP   LQS LWQ+ D   F    ++E +P    +GGG+ T
Sbjct: 33  IKTPANRAKTKAKAVTTPATAPELSLQSWLWQEKDDLVFLPLTLLEEDPLNSIEGGGDFT 92

Query: 82  TFAVGFISVVV 89
             AVGFI VV+
Sbjct: 93  ELAVGFIKVVL 103

[Close]
BLAST of MELO.jh009507.1 vs. ExPASy TrEMBL
Match: A0A498JBM4 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011914 PE=4 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 1.18e-09
Identity = 36/71 (50.70%), Postives = 44/71 (61.97%), Query Frame = 0 

Query: 22  INAPANNARTNAPAVTTPTTAPAPCLQSPLWQDVDLEFFC---VMESEPDGGCDGGGERT 81
           I  PAN A+T A AVTTP TAP   LQS LWQ+ D   F    ++E +P    +GGG+ T
Sbjct: 33  IKTPANRAKTKAKAVTTPATAPELSLQSWLWQEKDDLVFLPLTLLEEDPLNSIEGGGDFT 92

Query: 82  TFAVGFISVVV 89
             AVGFI VV+
Sbjct: 93  ELAVGFIKVVL 103

The following BLAST results are available for this feature:
BLAST of MELO.jh009507.1 vs. NCBI nr
Match NameE-valueIdentityDescription
RXH92890.12.43e-0950.70hypothetical protein DVH24_011914 [Malus domestica][more]
BLAST of MELO.jh009507.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh009507.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A498JBM41.18e-0950.70Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_011914 PE=4 SV=1[more]
BLAST of MELO.jh009507.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 91..113

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh009507.1.t1MELO.jh009507.1.t1mRNA