MELO.jh006729.1 (gene) Melon (Harukei-3) v1.41

Overview
NameMELO.jh006729.1
Typegene
OrganismCucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
DescriptionUnknown protein
Locationchr03: 28724398 .. 28724970 (+)
RNA-Seq ExpressionMELO.jh006729.1
SyntenyMELO.jh006729.1
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
AAACATATATTTACTTTTTAACTAATAGTGTATTTACGAGTTTTGGCGTACTTAATTAGCTTCCCCATCTCATCCATGCTGATGACACCATCCCCGTTGGTATCGGCGGCACGTAGGGCTTCTTCGACCCGGAAGTTGCTGAAGCGTGAGCCGAGATATTCAAAGGCTTGCTTCAACTCCTCCTTCGTCAGATTCCCATCCCCGTCTCGATCGTGGTTCTTGAAAACGTTGGCCAGTTGCTCCTCTGAGAAAGGAACTAGAACTCGTTTGTAAGTTTTGCTTTTGGAGTTCCCCATCAAAGCAAAGAAAGAAGAAGCCCCAATAGTTGAAAGAAAGGAAATAAGATTCAAAAAATATATATATATATATATATATTTCTTTTTAACTTGTTTTGTTGCGTTTGAAACTAAAAGCCTTAGTGGGCTTTTATAGCGAGGGAAAGCATCCTATGTATTAAAATTAATTTTAAGTATTTTAACTATCTCTAATTAGCATGTGAATGTGTAGATTCAAATAATTCTTATCTTTAACCAAATGTTAATAATAATATGTGTCTTGATCTTAATATTTTAA

mRNA sequence

AAACATATATTTACTTTTTAACTAATAGTGTATTTACGAGTTTTGGCGTACTTAATTAGCTTCCCCATCTCATCCATGCTGATGACACCATCCCCGTTGGTATCGGCGGCACGTAGGGCTTCTTCGACCCGGAAGTTGCTGAAGCGTGAGCCGAGATATTCAAAGGCTTGCTTCAACTCCTCCTTCGTCAGATTCCCATCCCCGTCTCGATCGTGGTTCTTGAAAACGTTGGCCAGTTGCTCCTCTGAGAAAGGAACTAGAACTCGTTTGTAAGTTTTGCTTTTGGAGTTCCCCATCAAAGCAAAGAAAGAAGAAGCCCCAATAGTTGAAAGAAAGGAAATAAGATTCAAAAAATATATATATATATATATATATTTCTTTTTAACTTGTTTTGTTGCGTTTGAAACTAAAAGCCTTAGTGGGCTTTTATAGCGAGGGAAAGCATCCTATGTATTAAAATTAATTTTAAGTATTTTAACTATCTCTAATTAGCATGTGAATGTGTAGATTCAAATAATTCTTATCTTTAACCAAATGTTAATAATAATATGTGTCTTGATCTTAATATTTTAA

Coding sequence (CDS)

ATGCTGATGACACCATCCCCGTTGGTATCGGCGGCACGTAGGGCTTCTTCGACCCGGAAGTTGCTGAAGCGTGAGCCGAGATATTCAAAGGCTTGCTTCAACTCCTCCTTCGTCAGATTCCCATCCCCGTCTCGATCGTGGTTCTTGAAAACGTTGGCCAGTTGCTCCTCTGAGAAAGGAACTAGAACTCGTTTGTAA

Protein sequence

MLMTPSPLVSAARRASSTRKLLKREPRYSKACFNSSFVRFPSPSRSWFLKTLASCSSEKGTRTRL
Homology
[Close]
BLAST of MELO.jh006729.1 vs. NCBI nr
Match: KAB2076126.1 (hypothetical protein ES319_A06G019700v1 [Gossypium barbadense] >TYJ28711.1 hypothetical protein E1A91_A06G019100v1 [Gossypium mustelinum])

HSP 1 Score: 47.8 bits (112), Expect = 4.60e-05
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 2  LMTPSPLVSAARRASSTRKLLKREPRYSKACFNSSFVRFPSPSRSWFLKTLASCSS 57
          LM PSPL SA  +   TR+L  R+P   K   NSS +R PSP  S FLKT  +CSS
Sbjct: 19 LMVPSPLPSAWCKDRRTRQLGFRDPSSRKTFINSSLLRQPSPLTSCFLKTAFNCSS 74

[Close]
BLAST of MELO.jh006729.1 vs. ExPASy TrEMBL
Match: A0A5J5V916 (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A06G019700v1 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.23e-05
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 2  LMTPSPLVSAARRASSTRKLLKREPRYSKACFNSSFVRFPSPSRSWFLKTLASCSS 57
          LM PSPL SA  +   TR+L  R+P   K   NSS +R PSP  S FLKT  +CSS
Sbjct: 19 LMVPSPLPSAWCKDRRTRQLGFRDPSSRKTFINSSLLRQPSPLTSCFLKTAFNCSS 74

[Close]
BLAST of MELO.jh006729.1 vs. ExPASy TrEMBL
Match: A0A5D2YUA6 (Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A06G019100v1 PE=4 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 2.23e-05
Identity = 29/56 (51.79%), Postives = 34/56 (60.71%), Query Frame = 0 

Query: 2  LMTPSPLVSAARRASSTRKLLKREPRYSKACFNSSFVRFPSPSRSWFLKTLASCSS 57
          LM PSPL SA  +   TR+L  R+P   K   NSS +R PSP  S FLKT  +CSS
Sbjct: 19 LMVPSPLPSAWCKDRRTRQLGFRDPSSRKTFINSSLLRQPSPLTSCFLKTAFNCSS 74

The following BLAST results are available for this feature:
BLAST of MELO.jh006729.1 vs. NCBI nr
Match NameE-valueIdentityDescription
KAB2076126.14.60e-0551.79hypothetical protein ES319_A06G019700v1 [Gossypium barbadense] >TYJ28711.1 hypot... [more]
BLAST of MELO.jh006729.1 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MELO.jh006729.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5J5V9162.23e-0551.79Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=ES319_A06G019700v1 PE... [more]
A0A5D2YUA62.23e-0551.79Uncharacterized protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A06G019100v1 P... [more]
BLAST of MELO.jh006729.1 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MELO.jh006729.1.t1MELO.jh006729.1.t1mRNA