MELO.jh005262.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh005262.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	zinc finger BED domain-containing protein RICESLEEPER 2-like
Location	chr03: 7892616 .. 7894696 (+)
RNA-Seq Expression	MELO.jh005262.1
Synteny	MELO.jh005262.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGATGGAGCAATTAAGTGTCAAAAGACTTTTGAAAGATTGGAGGAGCATGACCCTAGTTATTTGCCAAAGGATGATATTCCTACTACTGAAGATTGGGATAATGCAAAAGTGTTTGTAAAGTTCCTAAAGACTTTTTCAGAGGTAACAATGAAGTTTTCTGCATCTATGTCTGTGACTTCAAACATATTTTTCATGAACTTTGTTTGATCCAAGAAATAATTCGTGAATTCTCATCGTATGAGAATGCATTATTGAGTCAAATGACATTAAGCATGCAGACAAAATTCAACAAGTATTGGGGTATAACTACAAGTGAGAAGACCAATTTATTATTGTATGTTTCTGTAGTTCTTGACCCTAGGTACAAGCTAGCTTATGTGAATTATTGTTTTAATGAATTTTTTGAGGAAGATTGTGCAAAAATATGGACGAATAAGGTTGAAGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCTATCTCATCTAGTGGATCTTATAAGGCACGTGCTACTGTTCATGATAGATTTAAACAAAGTAGCAAAACATGTCTAGATGATGCTAAAACAGAGGTGACTCGTTATCTGGATGAGGCTCGTATAGATTGTATGGGCGATGAATATTTAGATTTGCTAACTTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAGTAGCTAGGGACATTTACAGTATTCCTATATCAACTGTGCCTTTTGAGCCCGCCTTTAGCATTGGAGGACGGGTGTTAGATGCTTTTTGAAGTTCTTTAACTCCTCAAACTGCAGAGACACTCATTTCTGCTCAGAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGGTAATATTCTTTTTGAAGTACGCATTTAAAATTTTCAATTATCCCATATAAGCTAACTGTTTGTCATTTTGATCTAGAATTCATAAACATAGGAAAGGAGATGGAAACTGCATTTGAGAATTTGAATAATGACTCTATGGTTTAAATCCCTACTCTCAAATCTTTATTTACATTTTTTTAAAATTGTTAACTTGTTAAATATCGAATCTTGTTTTTTTAGAGTCTTGAAGCTCAGTGATGGAAGCACTTTGGGTTATACGAACAATGTGGTCTCGTGAAGATGTTCATTAATTCATACCTTCACAATTGTAAACTCTGTTCATTTTAAGATAATAGTTGGATCTTTGTGATTGATTCTAATGTTTCAGGATTATTTTGAACCCTCGAGTCAAATGAGATTTAATGAACTTCTGTTTGCACTTTGCAGTATTATTTTCATTTATCTATTTAGTGCCTTAAAGCTAGTGACATGCTAAACATTAAACTATTGCAGTTGAGTATGTAATCATATATGTAAGCTCTTTTCAATTCATTTCCAGCATATCTATTTAAGATAAGTGCTAAGAAGGAGGAAAAAAAACCCGACCCGACCCGACCCATTCGGCCCAACCCGAATGTGGGTCGGGTCGGGTTGGGTTTCAGAATAAATCCGTACATTTCGGGTCGGGTCGGTTTTGAAGAAAACCCGACCCGAACCGACCCAATTACACCCCTAGTGTATATGAGTGGTCCGATGGGGTCACTTACAGCCCGATTGTCTTAAGTGTTCCTTCGGGTTCACTGAAGACTAGTTTGTTCTAAGTGTTCCTGTGAGTTCATCAAAAAAAAGTTTTGTCCTAGGTGTTCCTTTAGGATTACCAAAGACCAGAGATGTTCCTACGGGATCATTAGATTGTGTGTGTTCAGGAACGTGCCAGTTTAGGGGTATTTCTTTACAGGACCCAAACGAGAAGTTAGCAGACACCTAGCGAGACTAATAGTAGGTCCCTTACTAAGCATATGTTTATACTCACTTTTTCTATGTTTAATTTTCAGGCAAATCTTCAGGCAAAGTTAGAGGTAGAGATAGGGGTAGAAGAAAGCTGGCGAATGACAAGAAGTGA

mRNA sequence

ATGTTGGATGGAGCAATTAAGTGTCAAAAGACTTTTGAAAGATTGGAGGAGCATGACCCTAGTTATTTGCCAAAGGATGATATTCCTACTACTGAAGATTGGGATAATGCAAAAGTGTTTGTAAAGTTCCTAAAGACTTTTTCAGAGGTAACAATGAAGTTTTCTGCATCTATGTCTGTGACTTCAAACATATTTTTCATGAACTTTGTTTGATCCAAGAAATAATTCGTGAATTCTCATCGTATGAGAATGCATTATTGAGTCAAATGACATTAAGCATGCAGACAAAATTCAACAAGTATTGGGGTATAACTACAAGTGAGAAGACCAATTTATTATTGTATGTTTCTGTAGTTCTTGACCCTAGGTACAAGCTAGCTTATGTGAATTATTGTTTTAATGAATTTTTTGAGGAAGATTGTGCAAAAATATGGACGAATAAGGTTGAAGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCTATCTCATCTAGTGGATCTTATAAGGCACGTGCTACTGTTCATGATAGATTTAAACAAAGTAGCAAAACATGTCTAGATGATGCTAAAACAGAGGTGACTCGTTATCTGGATGAGGCTCGTATAGATTGTATGGGCGATGAATATTTAGATTTGCTAACTTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAGTAGCTAGGGACATTTACAGTATTCCTATATCAACTGTGCCTTTTGAGCCCGCCTTTAGCATTGGAGGACGGGTGTTAGATGCTTTTTGAAGTTCTTTAACTCCTCAAACTGCAGAGACACTCATTTCTGCTCAGAATTGGATTCAGTCTAAACCTTTGGATGACATGACTGAAGAAATTGACGGGGCTGAAGAAATTGATGAAGAATTCATAAACATAGGAAAGGAGATGGAAACTGCATTTGAGAATTTGAATAATGACTCTATGATAAGTGCTAAGAAGGAGGAAAAAAAACCCGACCCGACCCGACCCATTCGGCCCAACCCGAATGTGGGTCGGGTCGGGTTGGGTTTCAGAATAAATCCGTACATTTCGGGTCGGGTCGGTTTTGAAGAAAACCCGACCCGAACCGACCCAATTACACCCCTAGTGTATATGAGTGGTCCGATGGGGTCACTTACAGCCCGATTGTCTTAAGTGTTCCTTCGGGTTCACTGAAGACTAGTTTGTTCTAAGTGTTCCTGTGAGTTCATCAAAAAAAAGTTTTGTCCTAGGTGTTCCTTTAGGATTACCAAAGACCAGAGATGTTCCTACGGGATCATTAGATTGTGTGTGTTCAGGAACGTGCCAGTTTAGGGGCAAATCTTCAGGCAAAGTTAGAGGTAGAGATAGGGGTAGAAGAAAGCTGGCGAATGACAAGAAGTGA

Coding sequence (CDS)

ATGACATTAAGCATGCAGACAAAATTCAACAAGTATTGGGGTATAACTACAAGTGAGAAGACCAATTTATTATTGTATGTTTCTGTAGTTCTTGACCCTAGGTACAAGCTAGCTTATGTGAATTATTGTTTTAATGAATTTTTTGAGGAAGATTGTGCAAAAATATGGACGAATAAGGTTGAAGAAGCATTTCGTCGATTGTGTGATGATTATTATATGAGAATGTCAAAAGAAAAATATTCACAAACACAATCATGTACACCTATCGAAGGATTTGGCTTTCAAAGTCAAAGTGAAATACCTTCTATCTCATCTAGTGGATCTTATAAGGCACGTGCTACTGTTCATGATAGATTTAAACAAAGTAGCAAAACATGTCTAGATGATGCTAAAACAGAGGTGACTCGTTATCTGGATGAGGCTCGTATAGATTGTATGGGCGATGAATATTTAGATTTGCTAACTTGGTGGAAGGTGAATTCCTCTCGATTTAAGATCATTAGCCAAGTAGCTAGGGACATTTACAGTATTCCTATATCAACTGTGCCTTTTGAGCCCGCCTTTAGCATTGGAGGACGGGTGTTAGATGCTTTTTGA

Protein sequence

MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKVEEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFKQSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPISTVPFEPAFSIGGRVLDAF

Homology

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BLAST of MELO.jh005262.1 vs. NCBI nr
Match: ADN33674.1 (transposase [Cucumis melo subsp. melo])

HSP 1 Score: 395 bits (1014), Expect = 2.92e-136
Identity = 191/198 (96.46%), Postives = 194/198 (97.98%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEF EEDCAKIWTNKV
Sbjct: 102 MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKV 161

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK
Sbjct: 162 EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 221

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVN+SRFKIISQVARDIYSIPIS
Sbjct: 222 QSNKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPIS 281

Query: 181 TVPFEPAFSIGGRVLDAF 198
           TVP E AFS GGRVLD+F
Sbjct: 282 TVPSESAFSTGGRVLDSF 299

[Close]

BLAST of MELO.jh005262.1 vs. NCBI nr
Match: ACX85638.1 (putative transposase [Cucumis melo])

HSP 1 Score: 395 bits (1014), Expect = 1.04e-131
Identity = 191/198 (96.46%), Postives = 194/198 (97.98%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEF EEDCAKIWTNKV
Sbjct: 435 MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKV 494

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK
Sbjct: 495 EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 554

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVN+SRFKIISQVARDIYSIPIS
Sbjct: 555 QSNKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPIS 614

Query: 181 TVPFEPAFSIGGRVLDAF 198
           TVP E AFS GGRVLD+F
Sbjct: 615 TVPSESAFSTGGRVLDSF 632

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BLAST of MELO.jh005262.1 vs. NCBI nr
Match: XP_016899474.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 [Cucumis melo])

HSP 1 Score: 344 bits (882), Expect = 2.62e-116
Identity = 169/198 (85.35%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTL+MQTKFNKYWG+TTSEKTNLLLYV VVLD RYKLAYVNYCFNEF E+DC K+WTNK+
Sbjct: 39  MTLNMQTKFNKYWGMTTSEKTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKI 98

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAF RLCDDYYMRMSKEKYSQTQSCTPIEGF FQSQSEIPSISSSGSYK R  VHDRFK
Sbjct: 99  EEAFGRLCDDYYMRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFK 158

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEA I    DEYLDLL WWKVNSSRFKIISQV RD+YSIPIS
Sbjct: 159 QSNKTCLDDAKTEVTRYLDEAHIK---DEYLDLLNWWKVNSSRFKIISQVVRDMYSIPIS 218

Query: 181 TVPFEPAFSIGGRVLDAF 198
            VP E AFS GGRVL +F
Sbjct: 219 IVPSEFAFSTGGRVLTSF 233

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BLAST of MELO.jh005262.1 vs. NCBI nr
Match: XP_016899473.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 [Cucumis melo])

HSP 1 Score: 344 bits (882), Expect = 5.46e-116
Identity = 169/198 (85.35%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTL+MQTKFNKYWG+TTSEKTNLLLYV VVLD RYKLAYVNYCFNEF E+DC K+WTNK+
Sbjct: 102 MTLNMQTKFNKYWGMTTSEKTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKI 161

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAF RLCDDYYMRMSKEKYSQTQSCTPIEGF FQSQSEIPSISSSGSYK R  VHDRFK
Sbjct: 162 EEAFGRLCDDYYMRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFK 221

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEA I    DEYLDLL WWKVNSSRFKIISQV RD+YSIPIS
Sbjct: 222 QSNKTCLDDAKTEVTRYLDEAHIK---DEYLDLLNWWKVNSSRFKIISQVVRDMYSIPIS 281

Query: 181 TVPFEPAFSIGGRVLDAF 198
            VP E AFS GGRVL +F
Sbjct: 282 IVPSEFAFSTGGRVLTSF 296

[Close]

BLAST of MELO.jh005262.1 vs. NCBI nr
Match: XP_016899471.1 (PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo] >XP_016899472.1 PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 [Cucumis melo])

HSP 1 Score: 344 bits (882), Expect = 2.09e-115
Identity = 169/198 (85.35%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTL+MQTKFNKYWG+TTSEKTNLLLYV VVLD RYKLAYVNYCFNEF E+DC K+WTNK+
Sbjct: 102 MTLNMQTKFNKYWGMTTSEKTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKI 161

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAF RLCDDYYMRMSKEKYSQTQSCTPIEGF FQSQSEIPSISSSGSYK R  VHDRFK
Sbjct: 162 EEAFGRLCDDYYMRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFK 221

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEA I    DEYLDLL WWKVNSSRFKIISQV RD+YSIPIS
Sbjct: 222 QSNKTCLDDAKTEVTRYLDEAHIK---DEYLDLLNWWKVNSSRFKIISQVVRDMYSIPIS 281

Query: 181 TVPFEPAFSIGGRVLDAF 198
            VP E AFS GGRVL +F
Sbjct: 282 IVPSEFAFSTGGRVLTSF 296

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-14
Identity = 55/205 (26.83%), Postives = 96/205 (46.83%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           M ++M  KF KYW +     +N+ L V+  LDPRYK   + + + + F  D  K+     
Sbjct: 558 MAVAMSEKFEKYWKV-----SNIALAVACFLDPRYKKILIEF-YMKKFHGDSYKVHV--- 617

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
                    D ++R+ ++ Y    SC+P            P   ++ +     T+ +   
Sbjct: 618 ---------DDFVRVIRKLYQFYSSCSP----------SAPKTKTTTNDSMDDTLMENED 677

Query: 121 QSSKTCLDDAK-------TEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARD 180
              +  L + K        E+ +Y+ E  +   G    D+L+WW+   + + I++Q+ARD
Sbjct: 678 DEFQNYLHELKDYDQVESNELDKYMSEPLLKHSGQ--FDILSWWRGRVAEYPILTQIARD 732

Query: 181 IYSIPISTVPFEPAFSIGGRVLDAF 199
           + +I +STV  E AFS GGRV+D +
Sbjct: 738 VLAIQVSTVASESAFSAGGRVVDPY 732

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 6.9e-14
Identity = 55/205 (26.83%), Postives = 96/205 (46.83%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           M ++M  KF KYW +     +N+ L V+  LDPRYK   + + + + F  D  K+     
Sbjct: 527 MAVAMSEKFEKYWKV-----SNIALAVACFLDPRYKKILIEF-YMKKFHGDSYKVHV--- 586

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
                    D ++R+ ++ Y    SC+P            P   ++ +     T+ +   
Sbjct: 587 ---------DDFVRVIRKLYQFYSSCSP----------SAPKTKTTTNDSMDDTLMENED 646

Query: 121 QSSKTCLDDAK-------TEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARD 180
              +  L + K        E+ +Y+ E  +   G    D+L+WW+   + + I++Q+ARD
Sbjct: 647 DEFQNYLHELKDYDQVESNELDKYMSEPLLKHSGQ--FDILSWWRGRVAEYPILTQIARD 701

Query: 181 IYSIPISTVPFEPAFSIGGRVLDAF 199
           + +I +STV  E AFS GGRV+D +
Sbjct: 707 VLAIQVSTVASESAFSAGGRVVDPY 701

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13
Identity = 55/195 (28.21%), Postives = 93/195 (47.69%), Query Frame = 0


Query: 4   SMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKVEEA 63
           +MQ K +KYW        +L+L ++VV+DPR+K+  V + F++ F ED  K     V++ 
Sbjct: 494 TMQEKVDKYW-----RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKN-IKTVDDG 553

Query: 64  FRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFKQSS 123
              L  +Y    S +        T  EG       +   +S   +Y              
Sbjct: 554 IHELFTEYMALPSPQN-------TTSEG------GKADGLSDFDTY------------IM 613

Query: 124 KTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPISTVP 183
           +T   + K+E+ +YLDE  +  +  +  D+L WWK N  ++  +S++ARDI SIP+S   
Sbjct: 614 ETTGQNLKSELDQYLDETLLPRV--QEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAA 655

Query: 184 FEPAFSIGGRVLDAF 199
           F+  F +  R +D +
Sbjct: 674 FDYVFDMEPREMDEY 655

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy Swiss-Prot
Match: Q6AVI0 (Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0733400 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-12
Identity = 50/181 (27.62%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 5   MQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKVEEAF 64
           M  +F+KYW     +  NL+L ++VV+DPR+K+  V + +++ +  + AK         +
Sbjct: 500 MHERFDKYW-----KDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAK---------Y 559

Query: 65  RRLCDDYYMRMSKEKYSQTQSCTPI---EGFGFQSQSEIPSISSSGSYKARATVHDRFKQ 124
            ++ DD    + KE  +Q    TP    +G G  + +      ++        V      
Sbjct: 560 VKVVDDAVHELYKEYVAQPLPLTPAYVEQGDGNNAPASENGTQATAPSTGDGLVDFDMYL 619

Query: 125 SSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIST 183
           S        K+E+ +YLDE+    +  +  D+L WWK+N+ +F  +S++ARDI +IP+S 
Sbjct: 620 SEIATSQPTKSELEQYLDESLTPRI--QEFDILNWWKLNTLKFPTLSRMARDILAIPMSM 664

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy Swiss-Prot
Match: B9FJG3 (Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0239150 PE=3 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 4.9e-12
Identity = 49/181 (27.07%), Postives = 90/181 (49.72%), Query Frame = 0


Query: 5   MQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKVEEAF 64
           M  +F+KYW     +  NL+L ++VV+DPR+K+  V + +++ +  + AK         +
Sbjct: 500 MHERFDKYW-----KDCNLVLAIAVVMDPRFKMKLVEFSYSKIYGVEAAK---------Y 559

Query: 65  RRLCDDYYMRMSKEKYSQTQSCTPI---EGFGFQSQSEIPSISSSGSYKARATVHDRFKQ 124
            ++ DD    +  E  +Q    TP    +G G  + +   S  ++        V      
Sbjct: 560 VKVVDDAVHELYNEYVAQPLPLTPAYVEQGGGNNAPASENSTQATAPSTGDGLVDFDMYL 619

Query: 125 SSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIST 183
           S        K+E+ +YLDE+    +  +  D+L WWK+N+ ++  +S++ARDI +IP+S 
Sbjct: 620 SEIATSQPTKSELEQYLDESLTPRI--QEFDILNWWKLNTLKYPTLSKMARDILAIPMSM 664

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy TrEMBL
Match: E5GB32 (Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 1.41e-136
Identity = 191/198 (96.46%), Postives = 194/198 (97.98%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEF EEDCAKIWTNKV
Sbjct: 102 MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKV 161

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK
Sbjct: 162 EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 221

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVN+SRFKIISQVARDIYSIPIS
Sbjct: 222 QSNKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPIS 281

Query: 181 TVPFEPAFSIGGRVLDAF 198
           TVP E AFS GGRVLD+F
Sbjct: 282 TVPSESAFSTGGRVLDSF 299

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy TrEMBL
Match: D0UIX2 (Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1)

HSP 1 Score: 395 bits (1014), Expect = 5.02e-132
Identity = 191/198 (96.46%), Postives = 194/198 (97.98%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEF EEDCAKIWTNKV
Sbjct: 435 MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFLEEDCAKIWTNKV 494

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK
Sbjct: 495 EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 554

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVN+SRFKIISQVARDIYSIPIS
Sbjct: 555 QSNKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNASRFKIISQVARDIYSIPIS 614

Query: 181 TVPFEPAFSIGGRVLDAF 198
           TVP E AFS GGRVLD+F
Sbjct: 615 TVPSESAFSTGGRVLDSF 632

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy TrEMBL
Match: A0A1S4DU09 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 1.27e-116
Identity = 169/198 (85.35%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTL+MQTKFNKYWG+TTSEKTNLLLYV VVLD RYKLAYVNYCFNEF E+DC K+WTNK+
Sbjct: 39  MTLNMQTKFNKYWGMTTSEKTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKI 98

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAF RLCDDYYMRMSKEKYSQTQSCTPIEGF FQSQSEIPSISSSGSYK R  VHDRFK
Sbjct: 99  EEAFGRLCDDYYMRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFK 158

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEA I    DEYLDLL WWKVNSSRFKIISQV RD+YSIPIS
Sbjct: 159 QSNKTCLDDAKTEVTRYLDEAHIK---DEYLDLLNWWKVNSSRFKIISQVVRDMYSIPIS 218

Query: 181 TVPFEPAFSIGGRVLDAF 198
            VP E AFS GGRVL +F
Sbjct: 219 IVPSEFAFSTGGRVLTSF 233

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy TrEMBL
Match: A0A1S4DU44 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 2.65e-116
Identity = 169/198 (85.35%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTL+MQTKFNKYWG+TTSEKTNLLLYV VVLD RYKLAYVNYCFNEF E+DC K+WTNK+
Sbjct: 102 MTLNMQTKFNKYWGMTTSEKTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKI 161

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAF RLCDDYYMRMSKEKYSQTQSCTPIEGF FQSQSEIPSISSSGSYK R  VHDRFK
Sbjct: 162 EEAFGRLCDDYYMRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFK 221

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEA I    DEYLDLL WWKVNSSRFKIISQV RD+YSIPIS
Sbjct: 222 QSNKTCLDDAKTEVTRYLDEAHIK---DEYLDLLNWWKVNSSRFKIISQVVRDMYSIPIS 281

Query: 181 TVPFEPAFSIGGRVLDAF 198
            VP E AFS GGRVL +F
Sbjct: 282 IVPSEFAFSTGGRVLTSF 296

[Close]

BLAST of MELO.jh005262.1 vs. ExPASy TrEMBL
Match: A0A1S4DU07 (zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC107990533 PE=4 SV=1)

HSP 1 Score: 344 bits (882), Expect = 1.01e-115
Identity = 169/198 (85.35%), Postives = 177/198 (89.39%), Query Frame = 0


Query: 1   MTLSMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKV 60
           MTL+MQTKFNKYWG+TTSEKTNLLLYV VVLD RYKLAYVNYCFNEF E+DC K+WTNK+
Sbjct: 102 MTLNMQTKFNKYWGMTTSEKTNLLLYVYVVLDRRYKLAYVNYCFNEFLEKDCTKLWTNKI 161

Query: 61  EEAFRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFK 120
           EEAF RLCDDYYMRMSKEKYSQTQSCTPIEGF FQSQSEIPSISSSGSYK R  VHDRFK
Sbjct: 162 EEAFGRLCDDYYMRMSKEKYSQTQSCTPIEGFDFQSQSEIPSISSSGSYKERVVVHDRFK 221

Query: 121 QSSKTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPIS 180
           QS+KTCLDDAKTEVTRYLDEA I    DEYLDLL WWKVNSSRFKIISQV RD+YSIPIS
Sbjct: 222 QSNKTCLDDAKTEVTRYLDEAHIK---DEYLDLLNWWKVNSSRFKIISQVVRDMYSIPIS 281

Query: 181 TVPFEPAFSIGGRVLDAF 198
            VP E AFS GGRVL +F
Sbjct: 282 IVPSEFAFSTGGRVLTSF 296

[Close]

BLAST of MELO.jh005262.1 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 77.4 bits (189), Expect = 1.4e-14
Identity = 55/195 (28.21%), Postives = 93/195 (47.69%), Query Frame = 0


Query: 4   SMQTKFNKYWGITTSEKTNLLLYVSVVLDPRYKLAYVNYCFNEFFEEDCAKIWTNKVEEA 63
           +MQ K +KYW        +L+L ++VV+DPR+K+  V + F++ F ED  K     V++ 
Sbjct: 494 TMQEKVDKYW-----RDCSLVLAMAVVMDPRFKMKLVEFSFSKIFGEDAGKN-IKTVDDG 553

Query: 64  FRRLCDDYYMRMSKEKYSQTQSCTPIEGFGFQSQSEIPSISSSGSYKARATVHDRFKQSS 123
              L  +Y    S +        T  EG       +   +S   +Y              
Sbjct: 554 IHELFTEYMALPSPQN-------TTSEG------GKADGLSDFDTY------------IM 613

Query: 124 KTCLDDAKTEVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPISTVP 183
           +T   + K+E+ +YLDE  +  +  +  D+L WWK N  ++  +S++ARDI SIP+S   
Sbjct: 614 ETTGQNLKSELDQYLDETLLPRV--QEFDVLDWWKQNKLKYPTLSKMARDILSIPVSAAA 655

Query: 184 FEPAFSIGGRVLDAF 199
           F+  F +  R +D +
Sbjct: 674 FDYVFDMEPREMDEY 655

[Close]

BLAST of MELO.jh005262.1 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 44.7 bits (104), Expect = 1.0e-04
Identity = 22/64 (34.38%), Postives = 35/64 (54.69%), Query Frame = 0


Query: 133 EVTRYLDEARIDCMGDEYLDLLTWWKVNSSRFKIISQVARDIYSIPISTVPFEPAFSIGG 192
           E+T+YL E+ +        D+L WWKVNS R+  +S +ARD  ++  ++   E  F   G
Sbjct: 569 ELTQYLSESIVPMQ----TDVLDWWKVNSGRYPRLSNMARDFLAVQATSAAPEEIFCGKG 628

Query: 193 RVLD 197
             +D
Sbjct: 629 EEID 628

The following BLAST results are available for this feature:

BLAST of MELO.jh005262.1 vs. NCBI nr


Match Name	E-value	Identity	Description
ADN33674.1	2.92e-136	96.46	transposase [Cucumis melo subsp. melo]	[more]
ACX85638.1	1.04e-131	96.46	putative transposase [Cucumis melo]	[more]
XP_016899474.1	2.62e-116	85.35	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]
XP_016899473.1	5.46e-116	85.35	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]
XP_016899471.1	2.09e-115	85.35	PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like isoform ...	[more]

BLAST of MELO.jh005262.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08770	6.9e-14	26.83	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	6.9e-14	26.83	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q9M2N5	2.0e-13	28.21	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
Q6AVI0	1.7e-12	27.62	Zinc finger BED domain-containing protein RICESLEEPER 2 OS=Oryza sativa subsp. j...	[more]
B9FJG3	4.9e-12	27.07	Zinc finger BED domain-containing protein RICESLEEPER 1 OS=Oryza sativa subsp. j...	[more]

BLAST of MELO.jh005262.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
E5GB32	1.41e-136	96.46	Transposase OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
D0UIX2	5.02e-132	96.46	Putative transposase OS=Cucumis melo OX=3656 PE=4 SV=1	[more]
A0A1S4DU09	1.27e-116	85.35	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X3 OS=Cucum...	[more]
A0A1S4DU44	2.65e-116	85.35	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X2 OS=Cucum...	[more]
A0A1S4DU07	1.01e-115	85.35	zinc finger BED domain-containing protein RICESLEEPER 2-like isoform X1 OS=Cucum...	[more]

BLAST of MELO.jh005262.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	1.4e-14	28.21	BED zinc finger ;hAT family dimerisation domain	[more]
AT1G18560.1	1.0e-04	34.38	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025525	hAT-like transposase, RNase-H fold	PFAM	PF14372	DUF4413	coord: 1..71 e-value: 4.1E-16 score: 59.1
IPR008906	HAT, C-terminal dimerisation domain	PFAM	PF05699	Dimer_Tnp_hAT	coord: 134..196 e-value: 4.6E-15 score: 55.2
None	No IPR available	PANTHER	PTHR23272:SF137	ZINC FINGER BED DOMAIN-CONTAINING PROTEIN DAYSLEEPER-LIKE	coord: 1..197
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 1..197
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 5..195

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh005262.1.t1	MELO.jh005262.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0046983	protein dimerization activity