MELO.jh004995.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh004995.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	Unknown protein
Location	chr03: 2520006 .. 2521516 (+)
RNA-Seq Expression	MELO.jh004995.1
Synteny	MELO.jh004995.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TCGTCAGAAGTAAGGAGAGCTCTCAATGCTATTTTTGGTGCGTCAGGAATGGCGTCGAGAATGGCATCGAGAGTAATGCGAGATTTCGATGCCATTAGTTATTCGTTAGGAACGACGTCGGGAGTAAGAGGATCTCTCGATATTTTCGTACTGCTCGGGAGTTTCCCTTTAAACTAGATGTTTCAGTTCTGTGAAACACAGAACCAAAATGAAAGAGAGAAAAAGGAGGAGATGTCGGTGATCGAAGAGAAGAGAGTGCCTAGCCGTCACCGCCGTTGGCGTCATCCCTCTCCCGTCGTCTGCCAACCGCACGTTCCTAGTTGAGGTAAGTTTAAAATCCTAAATCTTAAAAAATATTAGTTTAGGTTAGGTTTATTTAAATAGTTTTTATTTTTTTAAATTAGTTTTAGGATTTTAATGATGAATTAGTTGTAGAATATTTTTTAGGAATAAATTTTGGTTTTTGAAATGGTAATTTTGAATGTGGGTTGGGGGAATATTTGAGAAAATTGATTTGGAGAATTGAAAATTTAAATGTGTGGGTGGAATTGAAAATTTGAATGTGTGGGTTGAATTGAAAATTTGAAGAAGAGGGGAGGATTATGGTTAATTATGATTTCAACTTTCAATATGCATAAGAAATATAGAATATAATTGTTTTCATGCAGGGCAATCATGGACGAACAAGGCTGCTAGACAGAAGCAGCTTTACAATCATAGTAGGGGTTAAAGTCGTTTCTACAACGACAGTAGAAGCTCGCTGAGTAAAGAGGGGAACAGGTCGACCGTGTGGATTTGTTCTAGCAAACACATGTTCGAGATGAGACGTTCATCTCCCAAGTTGCGAAGGATGCACATATAAGTTATCCAACCAACACTTCTGCTTTTATTTGTCCTTTTTAATATATAATATATTTTTTACTTACTAAGATAGTTTCTAAATTTTTTGCAGCATCAAATGCTATAACTCCAGTCCTAGCCTACCCTAGAGGGTAGTCAACCACTCTCTGGGGATGAGATATGCGAGACGGTGTTGGGTAGACGACTGGGCTACTTAAAAGGTCTTGGTTGGGGACCCAAGCCGAAGACCCGCAAGACGATGAGTGCAAGCAGTTCCACGACGTCATGTCCATAGTTCGTTCTAGAGCTTCAATTATAGGCTAAGCTTGATCAAGCTATGCAACGAATTAAAGAACAGACAAGAAATCATGAAGCATTAGTTTCAAAAGTGGAACGAATGCGGTAGTTGATAGAAGACATGACTCGGGCACAACAAGGACCACCACATGATCCCTAGCTTTGCAGTACGTATATATGTTTCCATTATTCTTAAGATTTTGAAATGACAGTATACAGTGATGATATGCATATATATGTACTAAACTTAGCCACTTTTATATCATTGTAGGACCTCCGGTGTAGAATGGCGTATGAGGCTTGTTATGAGACGTAAAACTTTCTTTACGCTTTTTTGTATTATGAACATTAAAATTTTTGTATTATGAACACTA

mRNA sequence

TCGTCAGAAGTAAGGAGAGCTCTCAATGCTATTTTTGGTGCGTCAGGAATGGCGTCGAGAATGGCATCGAGAGTAATGCGAGATTTCGATGCCATTAGTTATTCGTTAGGAACGACGTCGGGAAGAGAAAAAGGAGGAGATGTCGGTGATCGAAGAGAAGAGAGTGCCTAGCCGTCACCGCCGTTGGCGTCATCCCTCTCCCGTCGTCTGCCAACCGCACGTTCCTAGTTGAGGGCAATCATGGACGAACAAGGCTGCTAGACAGAAGCAGCTTTACAATCATAGTAGGGGACCTCCGGTGTAGAATGGCGTATGAGGCTTGTTATGAGACGTAAAACTTTCTTTACGCTTTTTTGTATTATGAACATTAAAATTTTTGTATTATGAACACTA

Coding sequence (CDS)

ATGGCGTCGAGAATGGCATCGAGAGTAATGCGAGATTTCGATGCCATTAGTTATTCGTTAGGAACGACGTCGGGAAGAGAAAAAGGAGGAGATGTCGGTGATCGAAGAGAAGAGAGTGCCTAG

Protein sequence

MASRMASRVMRDFDAISYSLGTTSGREKGGDVGDRREESA

Homology

The following BLAST results are available for this feature:

BLAST of MELO.jh004995.1 vs.


Match Name	E-value	Identity	Description

BLAST of MELO.jh004995.1 vs.


Match Name	E-value	Identity	Description

BLAST of MELO.jh004995.1 vs.


Match Name	E-value	Identity	Description

BLAST of MELO.jh004995.1 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..40

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh004995.1.t1	MELO.jh004995.1.t1	mRNA