MELO.jh000229.1 (gene) Melon (Harukei-3) v1.41

Overview


Name	MELO.jh000229.1
Type	gene
Organism	Cucumis melo var. reticulatus cv. Harukei-3 (Melon (Harukei-3) v1.41)
Description	60S ribosomal protein L30
Location	chr01: 1579886 .. 1580547 (+)
RNA-Seq Expression	MELO.jh000229.1
Synteny	MELO.jh000229.1

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonstart_codonCDSpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGCCGTTCAGTTGGTGAGTACAGCTTCGAATCTTCAATCATGGTGGCAGCAAAGAAGACAAAGAAGACCCATGAGAGCATCAACAACACTCACTCTCGTCATGAACAGTGGGAAATACACCTTGGGATACAAAACTGTCCTCAAGACCTTGAGGAACTCCAAAGGTAAGCTGATCATCGTTGCCAACAACTGCCCTCCACTCCAAAAGTCCAAGATAAAATACTATGCAATATTGGCCAAGGTTGGAGTTCACCATTACAATGGAAGCAATGTTGACCTTGGAACCGCTTGTGCAAATACTACAAGTATGCTGCCACAGCATTATCAATCCCGGTGATTCGGATATTATCAAAAGCATGCCTGAAAGTTAGGTTGCACTTCGTTTTAAGATCATAGACTTTTGTTTCAGAGTTTCTTCTTGATTTTGTGTTGAACGTAGTGATGTGTTTTGCTTGTGAGGCATGATATTATTGAACAATGGTTTCATTATAAACCCTTTTTTTATGTTAAAAAAATAATAATCAACTAAGATGACCAAAATACCTCAACTTACCCTAATCCTACTACATCACAAATTCAGATAAACTAAACTAGGTCAAATATCTTGTCTTTTTAATTTTTAAATAAACTAATTTTAATATATATTTTTAGGATTATTTAA

mRNA sequence

TAGCCGTTCAGTTGGTGAGTACAGCTTCGAATCTTCAATCATGGTGGCAGCAAAGAAGACAAAGAAGACCCATGAGAGCATCAACAACACTCACTCTCGTCATGAACAGTGGGAAATACACCTTGGGATACAAAACTGTCCTCAAGACCTTGAGGAACTCCAAAGGTAAGCTGATCATCGTTGCCAACAACTGCCCTCCACTCCAAAAGTCCAAGATAAAATACTATGCAATATTGGCCAAGGTTGGAGTTCACCATTACAATGGAAGCAATGTTGACCTTGGAACCGCTTGTGCAAATACTACAAGTATGCTGCCACAGCATTATCAATCCCGGTGATTCGGATATTATCAAAAGCATGCCTGAAAGTTAGGTTGCACTTCGTTTTAAGATCATAGACTTTTGTTTCAGAGTTTCTTCTTGATTTTGTGTTGAACGTAGTGATGTGTTTTGCTTGTGAGGCATGATATTATTGAACAATGGTTTCATTATAAACCCTTTTTTTATGTTAAAAAAATAATAATCAACTAAGATGACCAAAATACCTCAACTTACCCTAATCCTACTACATCACAAATTCAGATAAACTAAACTAGGTCAAATATCTTGTCTTTTTAATTTTTAAATAAACTAATTTTAATATATATTTTTAGGATTATTTAA

Coding sequence (CDS)

ATGAGAGCATCAACAACACTCACTCTCGTCATGAACAGTGGGAAATACACCTTGGGATACAAAACTGTCCTCAAGACCTTGAGGAACTCCAAAGGTAAGCTGATCATCGTTGCCAACAACTGCCCTCCACTCCAAAAGTCCAAGATAAAATACTATGCAATATTGGCCAAGGTTGGAGTTCACCATTACAATGGAAGCAATGTTGACCTTGGAACCGCTTGTGCAAATACTACAAGTATGCTGCCACAGCATTATCAATCCCGGTGA

Protein sequence

MRASTTLTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGSNVDLGTACANTTSMLPQHYQSR

Homology

[Close]

BLAST of MELO.jh000229.1 vs. NCBI nr
Match: XP_008451087.1 (PREDICTED: 60S ribosomal protein L30 [Cucumis melo] >KAA0055665.1 60S ribosomal protein L30 [Cucumis melo var. makuwa] >TYK09919.1 60S ribosomal protein L30 [Cucumis melo var. makuwa])

HSP 1 Score: 128 bits (321), Expect = 4.04e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. NCBI nr
Match: XP_022960585.1 (60S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosomal protein L30-like [Cucurbita maxima] >XP_023515547.1 60S ribosomal protein L30-like [Cucurbita pepo subsp. pepo] >KAG7022349.1 60S ribosomal protein L30 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 128 bits (321), Expect = 4.16e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. NCBI nr
Match: XP_038878626.1 (60S ribosomal protein L30 [Benincasa hispida])

HSP 1 Score: 128 bits (321), Expect = 4.16e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. NCBI nr
Match: XP_022157366.1 (60S ribosomal protein L30 [Momordica charantia])

HSP 1 Score: 128 bits (321), Expect = 8.53e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. NCBI nr
Match: PHT34863.1 (60S ribosomal protein L30 [Capsicum baccatum] >TMW91021.1 hypothetical protein EJD97_014913 [Solanum chilense])

HSP 1 Score: 127 bits (318), Expect = 1.03e-35
Identity = 60/68 (88.24%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNG+
Sbjct: 13 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGN 72

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 73 NVDLGTAC 80

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy Swiss-Prot
Match: O49884 (60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 8.3e-28
Identity = 58/68 (85.29%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLK+LR+SKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNG+
Sbjct: 18 LALVMKSGKYTLGYKTVLKSLRSSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGN 77

Query: 67 NVDLGTAC 75
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy Swiss-Prot
Match: Q9M5M6 (60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 1.6e-26
Identity = 55/71 (77.46%), Postives = 68/71 (95.77%), Query Frame = 0


Query: 4  STTLTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHY 63
          ++ L LVM SGK+TLGYKTVL++LR++KGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHY
Sbjct: 15 NSRLALVMKSGKFTLGYKTVLESLRSNKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHY 74

Query: 64 NGSNVDLGTAC 75
          NG+NVDLGTAC
Sbjct: 75 NGNNVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy Swiss-Prot
Match: Q8VZ19 (60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-25
Identity = 53/71 (74.65%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 4  STTLTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHY 63
          ++ L LVM SGKYTLGYK+VLK+LR SKGKLI+++ NCPPL++S+I+YYA+LAKVGVHHY
Sbjct: 15 NSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHY 74

Query: 64 NGSNVDLGTAC 75
          NG+NVDLGTAC
Sbjct: 75 NGNNVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy Swiss-Prot
Match: O48558 (60S ribosomal protein L30 OS=Zea mays OX=4577 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 1.3e-25
Identity = 54/68 (79.41%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVL+TLRNSK KL+I+ANNCPPL+KS+I+YYA+LAKV VHH++G+
Sbjct: 18 LQLVMKSGKYTLGYKTVLRTLRNSKSKLVIIANNCPPLRKSEIEYYAMLAKVTVHHFHGN 77

Query: 67 NVDLGTAC 75
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy Swiss-Prot
Match: Q9SDG6 (60S ribosomal protein L30 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL30 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 3.0e-25
Identity = 53/68 (77.94%), Postives = 64/68 (94.12%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVL+TLRNSK KL+I++NNCPPL+KS+I+YYA+LAKV VHH++G+
Sbjct: 18 LQLVMKSGKYTLGYKTVLRTLRNSKAKLVIISNNCPPLRKSEIEYYAMLAKVTVHHFHGN 77

Query: 67 NVDLGTAC 75
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy TrEMBL
Match: A0A0A0K2L6 (Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G064045 PE=3 SV=1)

HSP 1 Score: 133 bits (334), Expect = 1.47e-38
Identity = 64/74 (86.49%), Postives = 69/74 (93.24%), Query Frame = 0


Query: 1  MRASTTLTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGV 60
          MRASTTLTL+M SGKY LGYKTVLKTL NSKGK II+ANNCPP++KS+IKYYAILAKVGV
Sbjct: 1  MRASTTLTLIMKSGKYALGYKTVLKTLMNSKGKQIIIANNCPPVRKSEIKYYAILAKVGV 60

Query: 61 HHYNGSNVDLGTAC 74
          HHYNGSNVDLGT C
Sbjct: 61 HHYNGSNVDLGTVC 74

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy TrEMBL
Match: A0A5D3CI16 (60S ribosomal protein L30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G00350 PE=3 SV=1)

HSP 1 Score: 128 bits (321), Expect = 1.95e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy TrEMBL
Match: A0A1S3BQS6 (60S ribosomal protein L30 OS=Cucumis melo OX=3656 GN=LOC103492467 PE=3 SV=1)

HSP 1 Score: 128 bits (321), Expect = 1.95e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy TrEMBL
Match: A0A6J1JJ11 (60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111485536 PE=3 SV=1)

HSP 1 Score: 128 bits (321), Expect = 2.01e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. ExPASy TrEMBL
Match: A0A6J1H9H7 (60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111461321 PE=3 SV=1)

HSP 1 Score: 128 bits (321), Expect = 2.01e-36
Identity = 61/68 (89.71%), Postives = 66/68 (97.06%), Query Frame = 0


Query: 7  LTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHYNGS 66
          L LVM SGKYTLGYKTVLKTLRNSKGKLII+ANNCPPL+KS+I+YYA+LAKVGVHHYNGS
Sbjct: 18 LALVMKSGKYTLGYKTVLKTLRNSKGKLIIIANNCPPLRKSEIEYYAMLAKVGVHHYNGS 77

Query: 67 NVDLGTAC 74
          NVDLGTAC
Sbjct: 78 NVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. TAIR 10
Match: AT1G77940.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 116.7 bits (291), Expect = 9.4e-27
Identity = 53/71 (74.65%), Postives = 66/71 (92.96%), Query Frame = 0


Query: 4  STTLTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHY 63
          ++ L LVM SGKYTLGYK+VLK+LR SKGKLI+++ NCPPL++S+I+YYA+LAKVGVHHY
Sbjct: 15 NSRLALVMKSGKYTLGYKSVLKSLRGSKGKLILISTNCPPLRRSEIEYYAMLAKVGVHHY 74

Query: 64 NGSNVDLGTAC 75
          NG+NVDLGTAC
Sbjct: 75 NGNNVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. TAIR 10
Match: AT1G36240.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 114.4 bits (285), Expect = 4.7e-26
Identity = 52/71 (73.24%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 4  STTLTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHY 63
          ++ L LVM SGKYTLGYK+VLK+LR+SKGKLI++++NCPPL++S+I+YYA+LAKVGVHHY
Sbjct: 15 NSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHHY 74

Query: 64 NGSNVDLGTAC 75
          N +NVDLGTAC
Sbjct: 75 NRNNVDLGTAC 85

[Close]

BLAST of MELO.jh000229.1 vs. TAIR 10
Match: AT3G18740.1 (Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein )

HSP 1 Score: 114.4 bits (285), Expect = 4.7e-26
Identity = 52/71 (73.24%), Postives = 67/71 (94.37%), Query Frame = 0


Query: 4  STTLTLVMNSGKYTLGYKTVLKTLRNSKGKLIIVANNCPPLQKSKIKYYAILAKVGVHHY 63
          ++ L LVM SGKYTLGYK+VLK+LR+SKGKLI++++NCPPL++S+I+YYA+LAKVGVH Y
Sbjct: 15 NSRLALVMKSGKYTLGYKSVLKSLRSSKGKLILISSNCPPLRRSEIEYYAMLAKVGVHRY 74

Query: 64 NGSNVDLGTAC 75
          NG+NVDLGTAC
Sbjct: 75 NGNNVDLGTAC 85

The following BLAST results are available for this feature:

BLAST of MELO.jh000229.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451087.1	4.04e-36	89.71	PREDICTED: 60S ribosomal protein L30 [Cucumis melo] >KAA0055665.1 60S ribosomal ...	[more]
XP_022960585.1	4.16e-36	89.71	60S ribosomal protein L30-like [Cucurbita moschata] >XP_022988235.1 60S ribosoma...	[more]
XP_038878626.1	4.16e-36	89.71	60S ribosomal protein L30 [Benincasa hispida]	[more]
XP_022157366.1	8.53e-36	89.71	60S ribosomal protein L30 [Momordica charantia]	[more]
PHT34863.1	1.03e-35	88.24	60S ribosomal protein L30 [Capsicum baccatum] >TMW91021.1 hypothetical protein E...	[more]

BLAST of MELO.jh000229.1 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49884	8.3e-28	85.29	60S ribosomal protein L30 OS=Lupinus luteus OX=3873 GN=RPL30 PE=3 SV=1	[more]
Q9M5M6	1.6e-26	77.46	60S ribosomal protein L30 OS=Euphorbia esula OX=3993 GN=RPL30 PE=3 SV=1	[more]
Q8VZ19	1.3e-25	74.65	60S ribosomal protein L30-2 OS=Arabidopsis thaliana OX=3702 GN=RPL30B PE=3 SV=1	[more]
O48558	1.3e-25	79.41	60S ribosomal protein L30 OS=Zea mays OX=4577 GN=RPL30 PE=3 SV=1	[more]
Q9SDG6	3.0e-25	77.94	60S ribosomal protein L30 OS=Oryza sativa subsp. japonica OX=39947 GN=RPL30 PE=3...	[more]

BLAST of MELO.jh000229.1 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2L6	1.47e-38	86.49	Ribosomal_L7Ae domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G064...	[more]
A0A5D3CI16	1.95e-36	89.71	60S ribosomal protein L30 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3BQS6	1.95e-36	89.71	60S ribosomal protein L30 OS=Cucumis melo OX=3656 GN=LOC103492467 PE=3 SV=1	[more]
A0A6J1JJ11	2.01e-36	89.71	60S ribosomal protein L30-like OS=Cucurbita maxima OX=3661 GN=LOC111485536 PE=3 ...	[more]
A0A6J1H9H7	2.01e-36	89.71	60S ribosomal protein L30-like OS=Cucurbita moschata OX=3662 GN=LOC111461321 PE=...	[more]

BLAST of MELO.jh000229.1 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77940.1	9.4e-27	74.65	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT1G36240.1	4.7e-26	73.24	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]
AT3G18740.1	4.7e-26	73.24	Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Melon (Harukei-3) v1.41
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004038	Ribosomal protein L7Ae/L30e/S12e/Gadd45	PFAM	PF01248	Ribosomal_L7Ae	coord: 4..77 e-value: 7.7E-17 score: 60.8
IPR029064	50S ribosomal protein L30e-like	GENE3D	3.30.1330.30		coord: 2..81 e-value: 3.0E-31 score: 109.2
IPR029064	50S ribosomal protein L30e-like	SUPERFAMILY	55315	L30e-like	coord: 3..76
None	No IPR available	PANTHER	PTHR11449:SF21	RIBOSOMAL PROTEIN L30E-RELATED	coord: 4..76
IPR039109	Ribosomal protein L30/YlxQ	PANTHER	PTHR11449	RIBOSOMAL PROTEIN L30	coord: 4..76
IPR022991	Ribosomal protein L30e, conserved site	PROSITE	PS00709	RIBOSOMAL_L30E_1	coord: 13..37

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MELO.jh000229.1.t1	MELO.jh000229.1.t1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003723	RNA binding