MC11g_new0273 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g_new0273
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionFAS1 domain-containing protein
LocationMC11: 11274115 .. 11275078 (+)
RNA-Seq ExpressionMC11g_new0273
SyntenyMC11g_new0273
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATAATCAAGGAACTGAAAGCTATATAAAGGCCTTGGAGGGTTCAGTTCAAAACCAGAACAAAAAAGAAAACCCATTTATAAGCAAAGATGGGTTCTTCTTCTTTAATGGCCTCCCTTGTTTTTGCAGTTTTGGTGGCAGCTCTAAGCTTCCCATCCACAACCTCCCAAGGCTATGACGATGGCTCTCCTCCACCACCCGTTTATTATTCTACTCCACCGTCACCAAGGAGGTCTCCGAGGGTACCGCTACCAGGACCCCGAGTGCCGCTACCAGGACCTCGGGTGCCGCTACCAGACCCTAGAGTGCCGCTACCAGGACCGAGGGTACCACTACCAGGACCCCGAGTGCCGCTACCAGGACCTCGGGTGCCGCTACCAGACCCCAGAGTGCCGCTACCAGGACCGAGGGTGCCGCTACCAGGACCGAGGGTACCGCTGCCAGGACCGAGGGTACCACTGCCAGGACCTCGAGTGCCACTGCCAGGACCGAGGGTACCGTTGCCAGGACCCCGAGTGCCGCTACCAGGACCAAGGAGGTCGCCTCCTCCCCCGCCATCTCCCTACTTCTATTAGGTCAATATGCCTTATACTAAGTAAAGGTCAGCTTGTTACTTAAAAGAGATACAAAACTGAATATATATGTCGGTTTTGCAGGTAAAAGTCATAATAAAGCAAAAGAAGATTCACATGGATCATTTGCTATCGTTATTAAAGAAAGACCTCCTTCATCTGTTTCAGAATTTCTATGACTTCCTAGTTGTTTCAACGTGTGGTTTTCATTTAGTGTGTCGTTCATCAATAATATCAAACGTAACCTTTTGTGTTTCTTCGTAGAAAAGCTCGAAATCTTCATATTGTGAGACAAAAAGGAAATATTATTTAAATGTGGCTGTATTTGAAACAATATATTAAAAGGATTAATTAACTTCTAGCGAATTAATTTAAGTTTTTATATATCATCA

mRNA sequence

ATGACGATGGCTCTCCTCCACCACCCGTTTATTATTCTACTCCACCGTCACCAAGGAGGTCTCCGAGGGTACCGCTACCAGGACCCCGAGTGCCGCTACCAGGACCTCGGGTGCCGCTACCAGACCCTAGAGTGCCGCTACCAGGACCGAGGGTACCACTACCAGGACCCCGAGTGCCGCTACCAGGACCTCGGGTGCCGCTACCAGACCCCAGAGTGCCGCTACCAGGACCGAGGGTGCCGCTACCAGGACCGAGGGTACCGCTGCCAGGACCGAGGGTACCACTGCCAGGACCTCGAGTGCCACTGCCAGGACCGAGGGTACCGTTGCCAGGACCCCGAGTGCCGCTACCAGGACCAAGGAGGTCGCCTCCTCCCCCGCCATCTCCCTACTTCTATTAGGTAA

Coding sequence (CDS)

ATGACGATGGCTCTCCTCCACCACCCGTTTATTATTCTACTCCACCGTCACCAAGGAGGTCTCCGAGGGTACCGCTACCAGGACCCCGAGTGCCGCTACCAGGACCTCGGGTGCCGCTACCAGACCCTAGAGTGCCGCTACCAGGACCGAGGGTACCACTACCAGGACCCCGAGTGCCGCTACCAGGACCTCGGGTGCCGCTACCAGACCCCAGAGTGCCGCTACCAGGACCGAGGGTGCCGCTACCAGGACCGAGGGTACCGCTGCCAGGACCGAGGGTACCACTGCCAGGACCTCGAGTGCCACTGCCAGGACCGAGGGTACCGTTGCCAGGACCCCGAGTGCCGCTACCAGGACCAAGGAGGTCGCCTCCTCCCCCGCCATCTCCCTACTTCTATTAGGTAA

Protein sequence

MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECRYQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQGGRLLPRHLPTSIR
Homology
[Close]
BLAST of MC11g_new0273 vs. NCBI nr
Match: XP_022143676.1 (uncharacterized protein LOC111013520 isoform X2 [Momordica charantia])

HSP 1 Score: 306 bits (784), Expect = 1.39e-105
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60
           MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR
Sbjct: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60

Query: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120
           YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ
Sbjct: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120

Query: 121 GGRLLPRHLPTSIR 134
           GGRLLPRHLPTSIR
Sbjct: 121 GGRLLPRHLPTSIR 134

[Close]
BLAST of MC11g_new0273 vs. NCBI nr
Match: XP_022143675.1 (uncharacterized protein LOC111013520 isoform X1 [Momordica charantia])

HSP 1 Score: 281 bits (719), Expect = 2.13e-95
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0 

Query: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60
           MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR
Sbjct: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60

Query: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120
           YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ
Sbjct: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120

Query: 121 GGR 123
           GG+
Sbjct: 121 GGK 123

[Close]
BLAST of MC11g_new0273 vs. NCBI nr
Match: MBM3135681.1 (hypothetical protein [Chloroflexi bacterium])

HSP 1 Score: 88.6 bits (218), Expect = 8.21e-20
Identity = 46/95 (48.42%), Postives = 49/95 (51.58%), Query Frame = 0 

Query: 27  QDPECRYQDLGCRYQTLECRYQDRGYHYQDPECRYQDLGCRYQTPECRYQDRGCRYQDRG 86
           QD  CR QD GCR Q   CR QD G   QD   R QD GC+ Q    R QD  CR QD G
Sbjct: 2   QDARCRIQDAGCRMQDARCRMQDAGCKMQDARRRMQDAGCKMQDARRRMQDARCRMQDAG 61

Query: 87  YRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQG 121
            + QD     QD  C  QD G + QD  CR QD G
Sbjct: 62  CKMQDARCRMQDAGCKMQDAGCKMQDARCRMQDAG 96

[Close]
BLAST of MC11g_new0273 vs. NCBI nr
Match: MBM3135201.1 (hypothetical protein [Chloroflexi bacterium])

HSP 1 Score: 88.2 bits (217), Expect = 4.69e-19
Identity = 48/98 (48.98%), Postives = 52/98 (53.06%), Query Frame = 0 

Query: 27  QDPECRYQDLGCRYQTLECRYQDRGYHYQDPECRYQDLGCRYQTPECRYQDRGCRYQDRG 86
           QD  CR QD GCR Q   CR QD G       CR QD GC+ Q   C+ QD GCR Q+  
Sbjct: 2   QDAGCRTQDAGCRMQDAGCRKQDAG-------CRMQDAGCKKQDAGCKKQDAGCRMQEAR 61

Query: 87  YRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQGGRL 124
            R QD G   QD  C  QD G R QD  CR QD G R+
Sbjct: 62  CRMQDAGCKKQDAGCKKQDAGCRMQDAGCRMQDAGSRV 92

[Close]
BLAST of MC11g_new0273 vs. NCBI nr
Match: WP_202951377.1 (hypothetical protein [Paenibacillus sp. A9])

HSP 1 Score: 87.4 bits (215), Expect = 5.35e-19
Identity = 52/102 (50.98%), Postives = 53/102 (51.96%), Query Frame = 0 

Query: 23  GYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECRYQDLGCRYQTPECRYQDRGCRY 82
           GYR QD   R QD G R Q    R QD GY  QD   R QD G R Q    R QD G R 
Sbjct: 6   GYRIQDTGYRIQDTGYRIQDTGYRIQDTGYRIQDTGYRIQDTGYRIQDTGYRIQDTGYRI 65

Query: 83  QDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQGGRL 124
           QD GYR QD GY  QD     QD GYR QD   R QD G R+
Sbjct: 66  QDTGYRIQDTGYRIQDTGYRIQDTGYRIQDTGYRIQDTGYRI 107

[Close]
BLAST of MC11g_new0273 vs. ExPASy TrEMBL
Match: A0A6J1CR02 (uncharacterized protein LOC111013520 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013520 PE=4 SV=1)

HSP 1 Score: 306 bits (784), Expect = 6.75e-106
Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 

Query: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60
           MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR
Sbjct: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60

Query: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120
           YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ
Sbjct: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120

Query: 121 GGRLLPRHLPTSIR 134
           GGRLLPRHLPTSIR
Sbjct: 121 GGRLLPRHLPTSIR 134

[Close]
BLAST of MC11g_new0273 vs. ExPASy TrEMBL
Match: A0A6J1CPF6 (uncharacterized protein LOC111013520 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013520 PE=4 SV=1)

HSP 1 Score: 281 bits (719), Expect = 1.03e-95
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0 

Query: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60
           MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR
Sbjct: 1   MTMALLHHPFIILLHRHQGGLRGYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECR 60

Query: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120
           YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ
Sbjct: 61  YQDLGCRYQTPECRYQDRGCRYQDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQ 120

Query: 121 GGR 123
           GG+
Sbjct: 121 GGK 123

[Close]
BLAST of MC11g_new0273 vs. ExPASy TrEMBL
Match: A0A3B3RJN4 (Uncharacterized protein OS=Paramormyrops kingsleyae OX=1676925 PE=4 SV=1)

HSP 1 Score: 77.8 bits (190), Expect = 1.62e-15
Identity = 42/93 (45.16%), Postives = 45/93 (48.39%), Query Frame = 0 

Query: 26  YQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECRYQDLGCRYQTPECRYQDRGCRYQDR 85
           Y  P CRYQ   CRYQ+  CRYQ     YQ P CRYQ   CRY +P  RYQ   CRYQ  
Sbjct: 6   YPSPACRYQSPACRYQSPACRYQSPACRYQSPACRYQLPACRYHSPAFRYQSPACRYQLP 65

Query: 86  GYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQ 118
             R     YH            +R Q P CRYQ
Sbjct: 66  ACR-----YH---------SPAFRYQSPACRYQ 84

[Close]
BLAST of MC11g_new0273 vs. ExPASy TrEMBL
Match: A0A1S3QEQ3 (uncharacterized protein LOC106591781 OS=Salmo salar OX=8030 GN=LOC106591781 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.10e-10
Identity = 37/99 (37.37%), Postives = 52/99 (52.53%), Query Frame = 0 

Query: 23  GYRYQDPECRYQDLGCRYQTLECRYQDRGYHYQDPECRYQDLGCRYQTPECRYQDRGCRY 82
           GYR +D   R +D G R +    R +D GY  +D   R +D G R +    R +D G R 
Sbjct: 6   GYRAEDKGYRAEDTGYRAEDTGYRAEDTGYRAEDTGYRAEDTGYRAEDKGYRAEDTGYRA 65

Query: 83  QDRGYRCQDRGYHCQDLECHCQDRGYRCQDPECRYQDQG 121
           QD GYR +D GY  ++     +D+GYR +D   R +D G
Sbjct: 66  QDTGYRAKDTGYMAENTGYRAEDKGYRAEDTGYRAEDTG 104

[Close]
BLAST of MC11g_new0273 vs. ExPASy TrEMBL
Match: A0A1D9G9S2 (Uncharacterized protein OS=Moorea producens JHB OX=1454205 GN=BJP36_35250 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 2.43e-10
Identity = 32/75 (42.67%), Postives = 41/75 (54.67%), Query Frame = 0 

Query: 27  QDPECRYQDLGCRYQTLECRYQDRGYHYQDPECRYQDLGCRYQTPECRYQDRGCRYQDRG 86
           Q+ ECR Q+  CR Q  ECR Q+     Q+ ECR Q+  CR Q  ECR Q+  CR Q+  
Sbjct: 2   QNAECRMQNAECRMQNAECRMQNAECRMQNAECRMQNAECRMQNAECRMQNAECRMQNAE 61

Query: 87  YRCQDRGYHCQDLEC 101
            R Q+     Q+ EC
Sbjct: 62  CRMQNAECRMQNAEC 76

The following BLAST results are available for this feature:
BLAST of MC11g_new0273 vs.
Match NameE-valueIdentityDescription
BLAST of MC11g_new0273 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022143676.11.39e-105100.00uncharacterized protein LOC111013520 isoform X2 [Momordica charantia][more]
XP_022143675.12.13e-9599.19uncharacterized protein LOC111013520 isoform X1 [Momordica charantia][more]
MBM3135681.18.21e-2048.42hypothetical protein [Chloroflexi bacterium][more]
MBM3135201.14.69e-1948.98hypothetical protein [Chloroflexi bacterium][more]
WP_202951377.15.35e-1950.98hypothetical protein [Paenibacillus sp. A9][more]
BLAST of MC11g_new0273 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CR026.75e-106100.00uncharacterized protein LOC111013520 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CPF61.03e-9599.19uncharacterized protein LOC111013520 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A3B3RJN41.62e-1545.16Uncharacterized protein OS=Paramormyrops kingsleyae OX=1676925 PE=4 SV=1[more]
A0A1S3QEQ31.10e-1037.37uncharacterized protein LOC106591781 OS=Salmo salar OX=8030 GN=LOC106591781 PE=4... [more]
A0A1D9G9S22.43e-1042.67Uncharacterized protein OS=Moorea producens JHB OX=1454205 GN=BJP36_35250 PE=4 S... [more]
BLAST of MC11g_new0273 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g_new0273.1MC11g_new0273.1mRNA