MC11g_new0217 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0217
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	F-box domain-containing protein
Location	MC11: 8878907 .. 8880212 (+)
RNA-Seq Expression	MC11g_new0217
Synteny	MC11g_new0217

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAATATGAGAATCATTTGGTGGGGAAAAGAGTGAAAAAGGAAGAAAAATTTCCTCATCCACGATCCGTCGGCGGCAGCCACGGGCGACGACCTGCAGCATCGGATACGGCGGCTGTAAACCCGAGAGTCCCTCCGGCGGCCGTTCCTTGGACAGTGATAGATACATGGATTTGTTGCCAGAAAGAGTGCATTGTGAACATTCTGTCGTTCATGGCCACGGCGGAGGAGGTTTGCCGATTGGCGGCTGTTTCTCGGACTTTCCGATCAGGCGTTAATAGCGACGTTGTGTGGCTAAACTTTCTTCCGGTGGATTGGGAGCTCATGGTTTCTTCTATAAGGTCTTCGGAGGTGCCTTCGTGGTTGGTCTTCACGGCTGTACTGAAGAAGGATCTCTTTTATCTACTATGTCGTCAGTATGTACATCTCCATCCTCCTATATTTCCAGATCATTACACATCTTCCGTGTACGATAACCTGGAGAGTGTAAAGGTTAGTGGCTTTAAATTTCTCCAACCAGCCCATCTCATTATTCTAAGTAGTGGGTTGGATTAGTGGTTATTTACTTTTCCTATAATTATAATAGTTTTCTCTTGATTTGACTTTGTTGCTGAATCGAATTTTCAATTTTGTTTCTACTTCTTTTTCATCCGAAGGTCATATTTGTCACTTGTTCCAATGACGCCTTTCGAATATCGTACAATACTGACGTTGGGAACTACGTATGCAGTCTACTTGGTGTTCAAGTTCAAGTCAGTTGAACCCGCATCAAACCCGGTTCGATTATGCTTGTACCTTACACTTGGAATTGATATGGAAGTGCCAAAACAGTTTGTAGCCTTAAATCGTGTCCAAGGAATGATGAAAAGTTTTGAAGAAAGACCAGACGGGTGGATGGAAGTTGAAATTACCAAATTTACCCCACCTAAAGATACTATTGAATTTTCCTTCGGAGTGGACGAAGTCCCTCCTTACGACTACCCAATGGGATCGAAGTGAGGCCTAAAAATGTTTAATTTCGTTTCTTATTGCTTCCTCTTCCTCTTCCTCTTGCTTTGCTATATTTTTATGTTTATGGATTTGTTTTCTATTCGTGATAATGGCCATAAAAGGTTCATTAAGGTTTAATTATGTTTTGTGATTATGTTCTTATCATCCCCTCCTTTGAATTTCTTATTTTTTCCTTGCATTCAATTTTTTTCAAGCATCATCTCTGGCCATATTTGTTCACTCTTTCCAGAGTCCTTTATAATTTCTTGGTTCGCATTGAATCTCAATTACCAATAGTAATTTAAGATAATCCATCC

mRNA sequence

ATGGCCACGGCGGAGGAGGTTTGCCGATTGGCGGCTGTTTCTCGGACTTTCCGATCAGGCGTTAATAGCGACGTTGTGTGGCTAAACTTTCTTCCGGTGGATTGGGAGCTCATGGTTTCTTCTATAAGGTCTTCGGAGGTGCCTTCGTGGTTGGTCTTCACGGCTGTACTGAAGAAGGATCTCTTTTATCTACTATGTCGTCAGTATGTACATCTCCATCCTCCTATATTTCCAGATCATTACACATCTTCCGTGTACGATAACCTGGAGAGTGTAAAGTCTACTTGGTGTTCAAGTTCAAGTCAGTTGAACCCGCATCAAACCCGGTTCGATTATGCTTGTACCTTACACTTGGAATTGATATGGAAGTGCCAAAACAGTTTGTAG

Coding sequence (CDS)

ATGGCCACGGCGGAGGAGGTTTGCCGATTGGCGGCTGTTTCTCGGACTTTCCGATCAGGCGTTAATAGCGACGTTGTGTGGCTAAACTTTCTTCCGGTGGATTGGGAGCTCATGGTTTCTTCTATAAGGTCTTCGGAGGTGCCTTCGTGGTTGGTCTTCACGGCTGTACTGAAGAAGGATCTCTTTTATCTACTATGTCGTCAGTATGTACATCTCCATCCTCCTATATTTCCAGATCATTACACATCTTCCGTGTACGATAACCTGGAGAGTGTAAAGTCTACTTGGTGTTCAAGTTCAAGTCAGTTGAACCCGCATCAAACCCGGTTCGATTATGCTTGTACCTTACACTTGGAATTGATATGGAAGTGCCAAAACAGTTTGTAG

Protein sequence

MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKSTWCSSSSQLNPHQTRFDYACTLHLELIWKCQNSL

Homology

[Close]

BLAST of MC11g_new0217 vs. ExPASy Swiss-Prot
Match: Q9ZVQ8 (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 5.8e-06
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 5   EEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYL 64
           ++ C LA+VS+TF S V SD+VW  F+P ++E ++S  R+        F  + KK+L++ 
Sbjct: 54  QDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRA--------FKFLSKKELYFA 111

Query: 65  LCRQYV 71
           LC + V
Sbjct: 114 LCDKSV 111

[Close]

BLAST of MC11g_new0217 vs. ExPASy Swiss-Prot
Match: Q9ZVQ6 (F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.9e-05
Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 6   EVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLL 65
           + C  A VS+TF S V SD++W  FLP D+E        S +P   VF++  KK+L++ L
Sbjct: 33  DACVAATVSKTFESTVKSDIIWEKFLPADYE--------SLIPPSRVFSS--KKELYFSL 92

Query: 66  CRQYVHLHPPIFPDHYTSSVYDNLESVKSTWCSSSSQLN 105
           C      + P+  D    SV+  LE      C   S +N
Sbjct: 93  C------NDPVLFDDDKKSVW--LEKASGKRCLMLSAMN 113

[Close]

BLAST of MC11g_new0217 vs. ExPASy Swiss-Prot
Match: Q9FV02 (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 2.9e-05
Identity = 26/62 (41.94%), Postives = 38/62 (61.29%), Query Frame = 0


Query: 5  EEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYL 64
          E+ C  AAVS+ F S V SD+VW  FLP D+E +++  R        VF++  KK+L++ 
Sbjct: 42 EDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLITPSR--------VFSS--KKELYFS 93

Query: 65 LC 67
          LC
Sbjct: 102 LC 93

[Close]

BLAST of MC11g_new0217 vs. ExPASy Swiss-Prot
Match: Q9ZVQ9 (F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 8.4e-05
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 6   EVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLL 65
           + C  A VS+TF S V SD+VW  F+P ++E ++S  RS    S        KK+LF+ L
Sbjct: 59  DACVFALVSKTFESAVQSDIVWEKFIPPEYESLLS--RSQHFSS--------KKELFFAL 113

Query: 66  CRQYV 71
           C + V
Sbjct: 119 CDESV 113

[Close]

BLAST of MC11g_new0217 vs. ExPASy Swiss-Prot
Match: Q9ZVR5 (Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2)

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-04
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 6   EVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLL 65
           + C  A+VS+TF S VNSD VW  FLP D+        SS VP   VF++  KK+L++ +
Sbjct: 66  DACVAASVSKTFESAVNSDSVWDKFLPSDY--------SSLVPPSRVFSS--KKELYFAI 116

Query: 66  C 67
           C
Sbjct: 126 C 116

[Close]

BLAST of MC11g_new0217 vs. NCBI nr
Match: XP_022139660.1 (F-box protein PP2-B10-like [Momordica charantia])

HSP 1 Score: 195 bits (495), Expect = 1.03e-61
Identity = 99/119 (83.19%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
           MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD
Sbjct: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60

Query: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKSTW--CSSSSQLNPHQTRF-DYACTL 116
           LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVK  +  CS+ +    + T   +Y C+L
Sbjct: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKVIFVTCSNDAFRISYNTDVGNYVCSL 119

[Close]

BLAST of MC11g_new0217 vs. NCBI nr
Match: KDO39392.1 (hypothetical protein CISIN_1g042480mg [Citrus sinensis])

HSP 1 Score: 62.8 bits (151), Expect = 8.13e-09
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
           + T  + CRLAAVS  F+S  +SD+VW  FLP D++L++S+  SS   S    T++ KKD
Sbjct: 18  LTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS----TSLPKKD 77

Query: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKSTW 96
           L++ LC      H P+F ++ T S     E+ K  +
Sbjct: 78  LYFHLC------HYPVFINNCTMSFALEKETGKKCY 103

[Close]

BLAST of MC11g_new0217 vs. NCBI nr
Match: KDO49394.1 (hypothetical protein CISIN_1g046155mg, partial [Citrus sinensis])

HSP 1 Score: 59.3 bits (142), Expect = 1.30e-08
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 1  MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
          + T  + CRLA VS  F+S  +SDVVW  FLP D++L++    SS V +  + T++ KKD
Sbjct: 18 LTTPRDACRLAVVSPAFKSAADSDVVWEKFLPSDYKLII----SSSVSASSLITSLSKKD 77

Query: 61 LFYLLCRQ 68
          L++ LC  
Sbjct: 78 LYFHLCHH 81

[Close]

BLAST of MC11g_new0217 vs. NCBI nr
Match: XP_024035476.1 (F-box protein PP2-B3 [Citrus clementina])

HSP 1 Score: 59.3 bits (142), Expect = 1.36e-08
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 1  MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
          + T  + CRLA VS  F+S  +SDVVW  FLP D++L++    SS V +  + T++ KKD
Sbjct: 18 LTTPRDACRLAVVSPAFKSAADSDVVWEKFLPSDYKLII----SSSVSASSLITSLSKKD 77

Query: 61 LFYLLCRQ 68
          L++ LC  
Sbjct: 78 LYFHLCHH 81

[Close]

BLAST of MC11g_new0217 vs. NCBI nr
Match: XP_024958398.1 (F-box protein At2g02240-like [Citrus sinensis])

HSP 1 Score: 59.3 bits (142), Expect = 3.23e-08
Identity = 29/68 (42.65%), Postives = 44/68 (64.71%), Query Frame = 0


Query: 1  MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
          + T  + CRLA VS  F+S  +SD+VW  FLP  ++L++    S+ V S  + T++ KKD
Sbjct: 18 LTTPRDACRLAVVSPIFKSAADSDLVWEKFLPTAYKLVI----SNSVSSSSLITSLSKKD 77

Query: 61 LFYLLCRQ 68
          L++ LCRQ
Sbjct: 78 LYFHLCRQ 81

[Close]

BLAST of MC11g_new0217 vs. ExPASy TrEMBL
Match: A0A6J1CCX5 (F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111010509 PE=4 SV=1)

HSP 1 Score: 195 bits (495), Expect = 4.99e-62
Identity = 99/119 (83.19%), Postives = 105/119 (88.24%), Query Frame = 0


Query: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
           MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD
Sbjct: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60

Query: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKSTW--CSSSSQLNPHQTRF-DYACTL 116
           LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVK  +  CS+ +    + T   +Y C+L
Sbjct: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKVIFVTCSNDAFRISYNTDVGNYVCSL 119

[Close]

BLAST of MC11g_new0217 vs. ExPASy TrEMBL
Match: A0A067DK39 (F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042480mg PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 3.94e-09
Identity = 37/96 (38.54%), Postives = 56/96 (58.33%), Query Frame = 0


Query: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
           + T  + CRLAAVS  F+S  +SD+VW  FLP D++L++S+  SS   S    T++ KKD
Sbjct: 18  LTTPRDACRLAAVSHIFKSAADSDLVWEKFLPSDYKLIISNSVSSSSLS----TSLPKKD 77

Query: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKSTW 96
           L++ LC      H P+F ++ T S     E+ K  +
Sbjct: 78  LYFHLC------HYPVFINNCTMSFALEKETGKKCY 103

[Close]

BLAST of MC11g_new0217 vs. ExPASy TrEMBL
Match: A0A067E2D9 (F-box domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1g046155mg PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.29e-09
Identity = 29/68 (42.65%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 1  MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
          + T  + CRLA VS  F+S  +SDVVW  FLP D++L++    SS V +  + T++ KKD
Sbjct: 18 LTTPRDACRLAVVSPAFKSAADSDVVWEKFLPSDYKLII----SSSVSASSLITSLSKKD 77

Query: 61 LFYLLCRQ 68
          L++ LC  
Sbjct: 78 LYFHLCHH 81

[Close]

BLAST of MC11g_new0217 vs. ExPASy TrEMBL
Match: A0A067DH50 (F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g041394mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.68e-08
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
           + T  + CRLA VS  F+S  +SD+VW  FLP D++L++    S+ V S  + T++ KKD
Sbjct: 18  LTTPRDACRLAVVSPIFKSAADSDLVWEKFLPSDYKLII----SNSVSSSSLITSLSKKD 77

Query: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKSTWCSSSSQL 103
           L++ LC      H PIF ++ T S     E+ K  +   +  L
Sbjct: 78  LYFHLC------HYPIFINNGTMSFELEKETGKKCYMVGARDL 110

[Close]

BLAST of MC11g_new0217 vs. ExPASy TrEMBL
Match: V4S1D8 (F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10005646mg PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.68e-08
Identity = 37/103 (35.92%), Postives = 57/103 (55.34%), Query Frame = 0


Query: 1   MATAEEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKD 60
           + T  + CRLA VS  F+S  +SD+VW  FLP D++L++    S+ V S  + T++ KKD
Sbjct: 18  LTTPRDACRLAVVSPIFKSAADSDLVWEKFLPSDYKLII----SNSVSSSSLITSLSKKD 77

Query: 61  LFYLLCRQYVHLHPPIFPDHYTSSVYDNLESVKSTWCSSSSQL 103
           L++ LC      H PIF ++ T S     E+ K  +   +  L
Sbjct: 78  LYFHLC------HYPIFINNGTMSFELEKETGKKCYMVGARDL 110

[Close]

BLAST of MC11g_new0217 vs. TAIR 10
Match: AT2G02340.1 (phloem protein 2-B8 )

HSP 1 Score: 52.0 bits (123), Expect = 4.2e-07
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 5   EEVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYL 64
           ++ C LA+VS+TF S V SD+VW  F+P ++E ++S  R+        F  + KK+L++ 
Sbjct: 54  QDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRA--------FKFLSKKELYFA 111

Query: 65  LCRQYV 71
           LC + V
Sbjct: 114 LCDKSV 111

[Close]

BLAST of MC11g_new0217 vs. TAIR 10
Match: AT2G02360.1 (phloem protein 2-B10 )

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-06
Identity = 34/99 (34.34%), Postives = 49/99 (49.49%), Query Frame = 0


Query: 6   EVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLL 65
           + C  A VS+TF S V SD++W  FLP D+E        S +P   VF++  KK+L++ L
Sbjct: 33  DACVAATVSKTFESTVKSDIIWEKFLPADYE--------SLIPPSRVFSS--KKELYFSL 92

Query: 66  CRQYVHLHPPIFPDHYTSSVYDNLESVKSTWCSSSSQLN 105
           C      + P+  D    SV+  LE      C   S +N
Sbjct: 93  C------NDPVLFDDDKKSVW--LEKASGKRCLMLSAMN 113

[Close]

BLAST of MC11g_new0217 vs. TAIR 10
Match: AT2G02320.1 (phloem protein 2-B7 )

HSP 1 Score: 48.1 bits (113), Expect = 6.0e-06
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 0


Query: 6   EVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLL 65
           + C  A VS+TF S V SD+VW  F+P ++E ++S  RS    S        KK+LF+ L
Sbjct: 59  DACVFALVSKTFESAVQSDIVWEKFIPPEYESLLS--RSQHFSS--------KKELFFAL 113

Query: 66  CRQYV 71
           C + V
Sbjct: 119 CDESV 113

[Close]

BLAST of MC11g_new0217 vs. TAIR 10
Match: AT2G02250.1 (phloem protein 2-B2 )

HSP 1 Score: 47.8 bits (112), Expect = 7.8e-06
Identity = 27/61 (44.26%), Postives = 37/61 (60.66%), Query Frame = 0


Query: 6   EVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLL 65
           + C  A+VS+TF S VNSD VW  FLP D+        SS VP   VF++  KK+L++ +
Sbjct: 66  DACVAASVSKTFESAVNSDSVWDKFLPSDY--------SSLVPPSRVFSS--KKELYFAI 116

Query: 66  C 67
           C
Sbjct: 126 C 116

[Close]

BLAST of MC11g_new0217 vs. TAIR 10
Match: AT2G02240.1 (F-box family protein )

HSP 1 Score: 47.4 bits (111), Expect = 1.0e-05
Identity = 34/98 (34.69%), Postives = 49/98 (50.00%), Query Frame = 0


Query: 6   EVCRLAAVSRTFRSGVNSDVVWLNFLPVDWELMVSSIRSSEVPSWLVFTAVLKKDLFYLL 65
           + C  A+VS+TF S V+SD VW  FLP ++E +VS  R        VF +  KK+L++ L
Sbjct: 80  DACVAASVSKTFESAVSSDCVWDKFLPPEYESLVSRSR--------VFAS--KKELYFAL 139

Query: 66  CRQYVHLHPPIFPDHYTSSVYDNLESVKSTWCSSSSQL 104
           C      H P+  +    S +    S K     SS +L
Sbjct: 140 C------HNPVLIEDGKKSFWLEKASGKRCIMLSSKEL 161

The following BLAST results are available for this feature:

BLAST of MC11g_new0217 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZVQ8	5.8e-06	37.88	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
Q9ZVQ6	2.9e-05	34.34	F-box protein PP2-B10 OS=Arabidopsis thaliana OX=3702 GN=PP2B10 PE=1 SV=1	[more]
Q9FV02	2.9e-05	41.94	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]
Q9ZVQ9	8.4e-05	40.00	F-box protein PP2-B7 OS=Arabidopsis thaliana OX=3702 GN=PP2B7 PE=2 SV=1	[more]
Q9ZVR5	1.1e-04	44.26	Putative F-box protein PP2-B2 OS=Arabidopsis thaliana OX=3702 GN=PP2B2 PE=4 SV=2	[more]

BLAST of MC11g_new0217 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139660.1	1.03e-61	83.19	F-box protein PP2-B10-like [Momordica charantia]	[more]
KDO39392.1	8.13e-09	38.54	hypothetical protein CISIN_1g042480mg [Citrus sinensis]	[more]
KDO49394.1	1.30e-08	42.65	hypothetical protein CISIN_1g046155mg, partial [Citrus sinensis]	[more]
XP_024035476.1	1.36e-08	42.65	F-box protein PP2-B3 [Citrus clementina]	[more]
XP_024958398.1	3.23e-08	42.65	F-box protein At2g02240-like [Citrus sinensis]	[more]

BLAST of MC11g_new0217 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCX5	4.99e-62	83.19	F-box protein PP2-B10-like OS=Momordica charantia OX=3673 GN=LOC111010509 PE=4 S...	[more]
A0A067DK39	3.94e-09	38.54	F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g042480mg P...	[more]
A0A067E2D9	6.29e-09	42.65	F-box domain-containing protein (Fragment) OS=Citrus sinensis OX=2711 GN=CISIN_1...	[more]
A0A067DH50	2.68e-08	35.92	F-box domain-containing protein OS=Citrus sinensis OX=2711 GN=CISIN_1g041394mg P...	[more]
V4S1D8	2.68e-08	35.92	F-box domain-containing protein OS=Citrus clementina OX=85681 GN=CICLE_v10005646...	[more]

BLAST of MC11g_new0217 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02340.1	4.2e-07	37.88	phloem protein 2-B8	[more]
AT2G02360.1	2.1e-06	34.34	phloem protein 2-B10	[more]
AT2G02320.1	6.0e-06	40.00	phloem protein 2-B7	[more]
AT2G02250.1	7.8e-06	44.26	phloem protein 2-B2	[more]
AT2G02240.1	1.0e-05	34.69	F-box family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036047	F-box-like domain superfamily	SUPERFAMILY	81383	F-box domain	coord: 4..36

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0217.1	MC11g_new0217.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding