MC11g_new0200 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0200
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	organic cation/carnitine transporter 4-like
Location	MC11: 7997950 .. 7999064 (-)
RNA-Seq Expression	MC11g_new0200
Synteny	MC11g_new0200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAACGACGATGTTTTGCAGCAAGCGATCAGGAAGAAGGAAACTACGACGTTAAGTAACCTAATCGATGTGATGATCCACTCGCCTGTAGCGCGTGGGCGTCTGTTTCTTGCATCTGGCATGAGCTTCATGTGTGCCATCATGTACTACGGCCTAAGCTTGAATGTTGTCAACTTAAGGACAAATCTCTACCTCACTGTTGTCCTCAATGCCATTGCCGAGGTACAGCACAGTATCGATTTGTAGTTATATATTTGTTAGTTCTATGGTTTTTATTACTTTCATATTTCTTTTACCTCATATTAAGTAGACATAAATATGGATTAATATGTTTTATTGTCATATTTTGTTCATTCATTTATTTATTCTTTTCACGGATTTTAGTAAAGTATTCAAGCTTTCGATTTTATGGACTAGATTCATATAACTTTCAAAAAGTCCACATGACTTTAGAAGATTTGAACTTTCGAAAGTATAATAATTAGATAGACACAATCTTCGAGAGTGACACTTATAATTTAAAATTATTATAGTTTAGTAATTAATATTAACATGCTTAATTATATGAATTTATACCCCTTAGATACCAGCAGCGTTGCTTAACATTTTGGGAAGAAAAGGGGTGGGGATATTGACGTTTTGGTTCAGCGGTTTTTTCTGCTTGGTTGGAAGCTTGATGAGTAGTGATGGCGGTTGGAAAACGACAAAGACGATTTGTGGGATATTGGGAATGTTTGGCATGGCTGGAAACTACAGTCTACTATATTTGTATTGTGCAGAATTGTTTCCGACTGAGGTACTATTAAATCATCGCATAACTCAAAAGTTTATATTAGTAGATGTGTAGAAAACCTTCTAACTCTAAAAAAAACTATGTCTTTCGATTATATTTTTAATAGGTACGAAATACGATGGTGGGGATGACGATGCAGGCAATTGAAGTGGGAGCCATTGTAGCACCATTTTTGGTGCTTTTGGGGGAGAGCTTGCCGCTAATGGCGTTTGCCGTTTGTGGGATCGCCGGTGGAGTGATCGTAATTTTCACACCGGAGACGTTGAATAAGCCTTTATATGATACAATCCTCGGAATGGAGCGAGGAGAAGCTTGA

mRNA sequence

ATGGAAGGAAACGACGATGTTTTGCAGCAAGCGATCAGGAAGAAGGAAACTACGACGTTAAGTAACCTAATCGATGTGATGATCCACTCGCCTGTAGCGCGTGGGCGTCTGTTTCTTGCATCTGGCATGAGCTTCATGTGTGCCATCATGTACTACGGCCTAAGCTTGAATGTTGTCAACTTAAGGACAAATCTCTACCTCACTGTTGTCCTCAATGCCATTGCCGAGATACCAGCAGCGTTGCTTAACATTTTGGGAAGAAAAGGGGTGGGGATATTGACGTTTTGGTTCAGCGGTTTTTTCTGCTTGGTTGGAAGCTTGATGAGTAGTGATGGCGGTTGGAAAACGACAAAGACGATTTGTGGGATATTGGGAATGTTTGGCATGGCTGGAAACTACAGTCTACTATATTTGTATTGTGCAGAATTGTTTCCGACTGAGGTACGAAATACGATGGTGGGGATGACGATGCAGGCAATTGAAGTGGGAGCCATTGTAGCACCATTTTTGGTGCTTTTGGGGGAGAGCTTGCCGCTAATGGCGTTTGCCGTTTGTGGGATCGCCGGTGGAGTGATCGTAATTTTCACACCGGAGACGTTGAATAAGCCTTTATATGATACAATCCTCGGAATGGAGCGAGGAGAAGCTTGA

Coding sequence (CDS)

ATGGAAGGAAACGACGATGTTTTGCAGCAAGCGATCAGGAAGAAGGAAACTACGACGTTAAGTAACCTAATCGATGTGATGATCCACTCGCCTGTAGCGCGTGGGCGTCTGTTTCTTGCATCTGGCATGAGCTTCATGTGTGCCATCATGTACTACGGCCTAAGCTTGAATGTTGTCAACTTAAGGACAAATCTCTACCTCACTGTTGTCCTCAATGCCATTGCCGAGATACCAGCAGCGTTGCTTAACATTTTGGGAAGAAAAGGGGTGGGGATATTGACGTTTTGGTTCAGCGGTTTTTTCTGCTTGGTTGGAAGCTTGATGAGTAGTGATGGCGGTTGGAAAACGACAAAGACGATTTGTGGGATATTGGGAATGTTTGGCATGGCTGGAAACTACAGTCTACTATATTTGTATTGTGCAGAATTGTTTCCGACTGAGGTACGAAATACGATGGTGGGGATGACGATGCAGGCAATTGAAGTGGGAGCCATTGTAGCACCATTTTTGGTGCTTTTGGGGGAGAGCTTGCCGCTAATGGCGTTTGCCGTTTGTGGGATCGCCGGTGGAGTGATCGTAATTTTCACACCGGAGACGTTGAATAAGCCTTTATATGATACAATCCTCGGAATGGAGCGAGGAGAAGCTTGA

Protein sequence

MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLNAIAEIPAALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA

Homology

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BLAST of MC11g_new0200 vs. ExPASy Swiss-Prot
Match: Q9LHQ6 (Organic cation/carnitine transporter 4 OS=Arabidopsis thaliana OX=3702 GN=OCT4 PE=2 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-52
Identity = 110/217 (50.69%), Postives = 150/217 (69.12%), Query Frame = 0


Query: 5   DDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTN 64
           DD ++    ++ T    +L DV++ SP+ R RL ++  +SF  +I+YYGLSLNV NL+TN
Sbjct: 300 DDDVENNNGERNTAVEGSLKDVIL-SPLMRMRLVISVAISFTVSIVYYGLSLNVGNLKTN 359

Query: 65  LYLTVVLNAIAEIP-----AALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKT 124
           LYL V +NA++E+P     A LL+  GRK + I T WFS  FCLVG  +   G WK+ + 
Sbjct: 360 LYLNVFVNAVSEMPAFAITAVLLDKYGRKPLSIGTQWFSCVFCLVGFSVWGAGPWKSVRM 419

Query: 125 ICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPL 184
           + G+LG+FGMAG Y+LL++Y AELFPT VRN  +G   QA ++GAI+APF+V+LGE LP 
Sbjct: 420 VSGVLGIFGMAGTYNLLFIYIAELFPTVVRNAALGCATQAAQMGAILAPFVVVLGEELPF 479

Query: 185 MAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 217
             FAVCG+ GG +  + PETLNKPLYDT+ GM   E+
Sbjct: 480 GVFAVCGLVGGGLAFYLPETLNKPLYDTMFGMHEAES 515

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BLAST of MC11g_new0200 vs. ExPASy Swiss-Prot
Match: Q9CAT6 (Organic cation/carnitine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=OCT1 PE=2 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.0e-23
Identity = 69/194 (35.57%), Postives = 104/194 (53.61%), Query Frame = 0


Query: 36  RLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLNAIAEIPAA-----LLNILGRKGV 95
           R+ +     F    +YYG+ LN  NL  NLYLTV +NA+ E PA      LL ++ R+ +
Sbjct: 336 RIIMVMMAGFGSGFVYYGIQLNAENLNFNLYLTVAVNALMEFPAVFIGSFLLGVMNRRPL 395

Query: 96  GILTFWFSGFFCLVGSLMS------SDGGWKTTKTICGILGMFGMAGNYSLLYLYCAELF 155
              + + +GF CL+ +++S      +    K  +     +G    +  Y +LY+YC ELF
Sbjct: 396 FSNSSYLAGFACLLCAVLSIHRVIRAISVAKWLQLAVEAVGFMASSTAYDVLYVYCVELF 455

Query: 156 PTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFAVCGIA---GGVIVIFTPETLN 215
           PT VRNT V +  QA  +GA  AP LV LG    +M+F V G+A    G++ ++  ET N
Sbjct: 456 PTNVRNTAVSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWLRETRN 515

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BLAST of MC11g_new0200 vs. ExPASy Swiss-Prot
Match: Q28ES4 (Solute carrier family 22 member 15-like OS=Xenopus tropicalis OX=8364 GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 2.6e-22
Identity = 61/187 (32.62%), Postives = 102/187 (54.55%), Query Frame = 0


Query: 32  VARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLNAIAEIPAALLNIL------ 91
           V R R  L   + ++C+++YYGL+LN   L+ NLYL V L  + E+PA  L +       
Sbjct: 280 VLRWRTILLMYIWYVCSLVYYGLTLNAGELKGNLYLNVALYGLVEVPAFPLCLYFIEKSW 339

Query: 92  -GRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTICGILGMFGMAGNYSLLYLYCAELF 151
            GR+        F+GF C+    +    G     T+  + G   ++  ++++Y+Y +EL+
Sbjct: 340 SGRRKATAGFLGFAGFACIFTIFLPETNGDLLNPTVLALFGKLSVSAAFNVVYIYTSELY 399

Query: 152 PTEVRNTMVGMTMQAIEVGAIVAPFLVL---LGESLPLMAFAVCGIAGGVIVIFTPETLN 209
           PT VRN  +G+   A   G I++PF+     L  S+P +AF + GI+ G++ +  PET N
Sbjct: 400 PTVVRNAGLGVCAMACRFGGILSPFIPTMKSLNPSMPFVAFGISGISAGILSLLLPETRN 459

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BLAST of MC11g_new0200 vs. ExPASy Swiss-Prot
Match: Q7ZX53 (Solute carrier family 22 member 15-like OS=Xenopus laevis OX=8355 GN=slc22a15b PE=2 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 4.4e-22
Identity = 66/222 (29.73%), Postives = 115/222 (51.80%), Query Frame = 0


Query: 1   MEGNDDVLQQAIRKKE----TTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSL 60
           M   + V +  +R K     T   ++ +  ++   V R R  L   + ++C+++YYGL+L
Sbjct: 245 MAAGNGVERPVVRLKSCPGTTANSAHSVFDLVKYGVLRWRTILLMYIWYVCSLVYYGLTL 304

Query: 61  NVVNLRTNLYLTVVLNAIAEIPAALLNIL-------GRKGVGILTFWFSGFFCLVGSLMS 120
           N   L+ NLYL V L  + E+PA  L +        GR+        F+GF C+    + 
Sbjct: 305 NAGELKGNLYLNVALYGLVEVPAFPLCLYFIEKSWSGRRRATAGFLVFAGFACIFTIFVP 364

Query: 121 SDGGWKTTKTICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPF 180
              G     T+  + G   ++  ++++Y+Y +EL+PT VRN  +G+   A   G I++PF
Sbjct: 365 ETNGDFINPTVLALFGKLSVSAAFNVVYIYTSELYPTVVRNAGLGVCAMACRFGGILSPF 424

Query: 181 LVLL---GESLPLMAFAVCGIAGGVIVIFTPETLNKPLYDTI 209
           +  +     S+P +AF + GI+ G++ +  PET NKP+ +TI
Sbjct: 425 IPAMKSFNPSMPFVAFGISGISAGILSLLLPETRNKPIAETI 466

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BLAST of MC11g_new0200 vs. ExPASy Swiss-Prot
Match: Q6NUB3 (Solute carrier family 22 member 15 OS=Xenopus laevis OX=8355 GN=slc22a15 PE=2 SV=2)

HSP 1 Score: 99.4 bits (246), Expect = 5.4e-20
Identity = 65/210 (30.95%), Postives = 120/210 (57.14%), Query Frame = 0


Query: 13  RKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLN 72
           R+K++T  +N+I +  +S + R R  +   + F+C+++YYGL+L+  +L  ++YL + L+
Sbjct: 274 RQKDSTHSANIITIYSNS-ILRHRTLVMMWVWFVCSLVYYGLTLSSGDLGGDIYLNLALS 333

Query: 73  AIAEIPA--ALLNILGRKGVG----ILTFWF-SGFFCLVGSLMSSDGGWKTTKTI----C 132
            +AE+PA    + ++  K VG    +  F F  G  CL+  L+    G      +     
Sbjct: 334 GLAELPAYPLCMYLINHKRVGRRRSLAGFLFLGGGSCLLIMLVPVKEGSGPLSVLNSQTL 393

Query: 133 GILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGE---SLP 192
            +LG   ++ +++++Y+Y +EL+PT VRN  +G+      +G I+APF+  L     +LP
Sbjct: 394 SLLGKLNISASFNIVYIYSSELYPTCVRNLGMGVCSMFSRIGGIIAPFIPALRSVHWALP 453

Query: 193 LMAFAVCGIAGGVIVIFTPETLNKPLYDTI 209
            + F   G++ G++ +F PETLN PL +T+
Sbjct: 454 FIVFGAAGVSAGLLSLFLPETLNVPLPETL 482

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BLAST of MC11g_new0200 vs. NCBI nr
Match: XP_022139620.1 (organic cation/carnitine transporter 4-like [Momordica charantia] >XP_022139621.1 organic cation/carnitine transporter 4-like [Momordica charantia])

HSP 1 Score: 419 bits (1078), Expect = 2.20e-143
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN 60
           MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN
Sbjct: 289 MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN 348

Query: 61  LRTNLYLTVVLNAIAEIPAALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTI 120
           LRTNLYLTVVLNAIAEIPAALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTI
Sbjct: 349 LRTNLYLTVVLNAIAEIPAALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTI 408

Query: 121 CGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLM 180
           CGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLM
Sbjct: 409 CGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLM 468

Query: 181 AFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 216
           AFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA
Sbjct: 469 AFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 504

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BLAST of MC11g_new0200 vs. NCBI nr
Match: XP_022139675.1 (organic cation/carnitine transporter 4-like [Momordica charantia])

HSP 1 Score: 370 bits (950), Expect = 7.37e-124
Identity = 188/221 (85.07%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN 60
           ME NDDVLQQA  KKETTTLSNL+DVMIHSP  RGRLFLAS MSFMCA++YYGLSLNVVN
Sbjct: 292 MEANDDVLQQARGKKETTTLSNLMDVMIHSPGVRGRLFLASSMSFMCAVVYYGLSLNVVN 351

Query: 61  LRTNLYLTVVLNAIAEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWK 120
           L+TNLYLTVVLNAI E+PA      L+NILGRKGVGILTFWFSGFFCLVGS +SSDGGWK
Sbjct: 352 LKTNLYLTVVLNAIVEVPAFVVTAVLVNILGRKGVGILTFWFSGFFCLVGSSLSSDGGWK 411

Query: 121 TTKTICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGE 180
           TTKT+CG+LGMFGMAGNYSLL+LYCAELFPTEVRNTMVG+TMQAIE+GAI+APFLVLLGE
Sbjct: 412 TTKTVCGVLGMFGMAGNYSLLFLYCAELFPTEVRNTMVGLTMQAIELGAILAPFLVLLGE 471

Query: 181 SLPLMAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 216
            LPLM FAV GI GGVIVIFTPET+NKPLYDTI+GMERGEA
Sbjct: 472 RLPLMVFAVSGIVGGVIVIFTPETMNKPLYDTIVGMERGEA 512

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BLAST of MC11g_new0200 vs. NCBI nr
Match: XP_022142755.1 (organic cation/carnitine transporter 4-like, partial [Momordica charantia])

HSP 1 Score: 239 bits (611), Expect = 2.82e-74
Identity = 124/217 (57.14%), Postives = 158/217 (72.81%), Query Frame = 0


Query: 4   NDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRT 63
           +DD+ +Q+ + +ET    +LIDV I SP+ R RL LA  ++FMCA++YYGLSLNVVNL T
Sbjct: 167 DDDISKQSTQIEETAQSGSLIDV-IRSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDT 226

Query: 64  NLYLTVVLNAIAEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTK 123
           N+YLTV +NA+AE+PA      LL++ GRK + I T WFSG FCL GSLM   G WK  +
Sbjct: 227 NIYLTVAVNAVAEMPAFLFTAVLLDLCGRKPLAIGTMWFSGGFCLAGSLMKGAGNWKIVR 286

Query: 124 TICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLP 183
             CG+LG+FGMAG Y+LLY+Y AELFPT VRN  +G   QA ++GAI+APF+V+LG  LP
Sbjct: 287 MGCGVLGIFGMAGTYNLLYIYTAELFPTVVRNAALGSATQASQMGAILAPFVVVLGGGLP 346

Query: 184 LMAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGE 215
              FA CGI GG +  + PETLNKPLYDT+ G+E GE
Sbjct: 347 FAVFAGCGIVGGALAFYLPETLNKPLYDTMGGLEDGE 382

[Close]

BLAST of MC11g_new0200 vs. NCBI nr
Match: XP_023546283.1 (organic cation/carnitine transporter 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 232 bits (592), Expect = 2.58e-73
Identity = 120/206 (58.25%), Postives = 152/206 (73.79%), Query Frame = 0


Query: 15  KETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLNAI 74
           ++TT   +L+DVM  SP+ R RL LA  ++FMCA++YYGLSLNVVNL TN+YLTV LNA+
Sbjct: 34  QQTTQSGSLLDVM-RSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDTNIYLTVALNAV 93

Query: 75  AEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTICGILGMFGM 134
           AE+PA      LL++ GRK + I T WFSG FCL GSLM   G WK  + +CG+LG+FGM
Sbjct: 94  AEMPAFLITALLLDVCGRKPLAIGTLWFSGVFCLCGSLMKGVGMWKIVRMVCGMLGIFGM 153

Query: 135 AGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFAVCGIAG 194
           AG Y+LLY+Y AELFPT VRN  +G   QA ++GAI+APF+V++G  LP   FA CGI G
Sbjct: 154 AGTYNLLYIYTAELFPTVVRNAALGCGTQASQMGAILAPFVVVMGGGLPFAVFAGCGIMG 213

Query: 195 GVIVIFTPETLNKPLYDTILGMERGE 215
           G +  + PETLNKPLYDT+ G+E GE
Sbjct: 214 GALAFYLPETLNKPLYDTMGGIEDGE 238

[Close]

BLAST of MC11g_new0200 vs. NCBI nr
Match: XP_002530918.1 (organic cation/carnitine transporter 4 [Ricinus communis] >EEF31467.1 Organic cation transporter, putative [Ricinus communis])

HSP 1 Score: 239 bits (610), Expect = 1.42e-72
Identity = 127/213 (59.62%), Postives = 157/213 (73.71%), Query Frame = 0


Query: 9   QQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLT 68
           ++ I KKE     +LIDV I SPV R RLFL   +SF+C+++YYGLSLNVVNL TNLYLT
Sbjct: 312 KEKIAKKEAIA-GSLIDV-IQSPVTRVRLFLTVAISFLCSVVYYGLSLNVVNLDTNLYLT 371

Query: 69  VVLNAIAEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTICGI 128
           V+LNA+AE+PA      LLN  GRK + + T WFSG FCL GSLM S G WK T+ ICG+
Sbjct: 372 VLLNAVAEMPAFTITAILLNKFGRKPLAVGTQWFSGLFCLTGSLMGSVGIWKVTRMICGL 431

Query: 129 LGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFA 188
           LG+FGMAG Y+LL++Y AELFPT VRN  +G   QA ++GAI+AP +V+LG  LP   FA
Sbjct: 432 LGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVLGGGLPFAVFA 491

Query: 189 VCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 216
           VCGI GG +  + PETLN+PLYDT+ GME GE+
Sbjct: 492 VCGIMGGFLAFYLPETLNRPLYDTMTGMEDGES 522

[Close]

BLAST of MC11g_new0200 vs. ExPASy TrEMBL
Match: A0A6J1CCT7 (organic cation/carnitine transporter 4-like OS=Momordica charantia OX=3673 GN=LOC111010478 PE=4 SV=1)

HSP 1 Score: 419 bits (1078), Expect = 1.07e-143
Identity = 216/216 (100.00%), Postives = 216/216 (100.00%), Query Frame = 0


Query: 1   MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN 60
           MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN
Sbjct: 289 MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN 348

Query: 61  LRTNLYLTVVLNAIAEIPAALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTI 120
           LRTNLYLTVVLNAIAEIPAALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTI
Sbjct: 349 LRTNLYLTVVLNAIAEIPAALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTI 408

Query: 121 CGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLM 180
           CGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLM
Sbjct: 409 CGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLM 468

Query: 181 AFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 216
           AFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA
Sbjct: 469 AFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 504

[Close]

BLAST of MC11g_new0200 vs. ExPASy TrEMBL
Match: A0A6J1CCZ1 (organic cation/carnitine transporter 4-like OS=Momordica charantia OX=3673 GN=LOC111010523 PE=4 SV=1)

HSP 1 Score: 370 bits (950), Expect = 3.57e-124
Identity = 188/221 (85.07%), Postives = 203/221 (91.86%), Query Frame = 0


Query: 1   MEGNDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVN 60
           ME NDDVLQQA  KKETTTLSNL+DVMIHSP  RGRLFLAS MSFMCA++YYGLSLNVVN
Sbjct: 292 MEANDDVLQQARGKKETTTLSNLMDVMIHSPGVRGRLFLASSMSFMCAVVYYGLSLNVVN 351

Query: 61  LRTNLYLTVVLNAIAEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWK 120
           L+TNLYLTVVLNAI E+PA      L+NILGRKGVGILTFWFSGFFCLVGS +SSDGGWK
Sbjct: 352 LKTNLYLTVVLNAIVEVPAFVVTAVLVNILGRKGVGILTFWFSGFFCLVGSSLSSDGGWK 411

Query: 121 TTKTICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGE 180
           TTKT+CG+LGMFGMAGNYSLL+LYCAELFPTEVRNTMVG+TMQAIE+GAI+APFLVLLGE
Sbjct: 412 TTKTVCGVLGMFGMAGNYSLLFLYCAELFPTEVRNTMVGLTMQAIELGAILAPFLVLLGE 471

Query: 181 SLPLMAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 216
            LPLM FAV GI GGVIVIFTPET+NKPLYDTI+GMERGEA
Sbjct: 472 RLPLMVFAVSGIVGGVIVIFTPETMNKPLYDTIVGMERGEA 512

[Close]

BLAST of MC11g_new0200 vs. ExPASy TrEMBL
Match: A0A6J1CLU1 (organic cation/carnitine transporter 4-like OS=Momordica charantia OX=3673 GN=LOC111012795 PE=4 SV=1)

HSP 1 Score: 239 bits (611), Expect = 1.36e-74
Identity = 124/217 (57.14%), Postives = 158/217 (72.81%), Query Frame = 0


Query: 4   NDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRT 63
           +DD+ +Q+ + +ET    +LIDV I SP+ R RL LA  ++FMCA++YYGLSLNVVNL T
Sbjct: 167 DDDISKQSTQIEETAQSGSLIDV-IRSPITRIRLILAVAINFMCAVVYYGLSLNVVNLDT 226

Query: 64  NLYLTVVLNAIAEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTK 123
           N+YLTV +NA+AE+PA      LL++ GRK + I T WFSG FCL GSLM   G WK  +
Sbjct: 227 NIYLTVAVNAVAEMPAFLFTAVLLDLCGRKPLAIGTMWFSGGFCLAGSLMKGAGNWKIVR 286

Query: 124 TICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLP 183
             CG+LG+FGMAG Y+LLY+Y AELFPT VRN  +G   QA ++GAI+APF+V+LG  LP
Sbjct: 287 MGCGVLGIFGMAGTYNLLYIYTAELFPTVVRNAALGSATQASQMGAILAPFVVVLGGGLP 346

Query: 184 LMAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGE 215
              FA CGI GG +  + PETLNKPLYDT+ G+E GE
Sbjct: 347 FAVFAGCGIVGGALAFYLPETLNKPLYDTMGGLEDGE 382

[Close]

BLAST of MC11g_new0200 vs. ExPASy TrEMBL
Match: U7DZ61 (MFS domain-containing protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR_0489s002101g PE=4 SV=1)

HSP 1 Score: 232 bits (592), Expect = 6.84e-73
Identity = 123/217 (56.68%), Postives = 155/217 (71.43%), Query Frame = 0


Query: 4   NDDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRT 63
           ND   +Q    KE  T  ++IDV I SPV R RLFLA  ++FMC+++YYGLSLNVVNL T
Sbjct: 79  NDQSDKQGFATKEAIT-GSVIDV-IRSPVTRVRLFLAVAINFMCSVVYYGLSLNVVNLDT 138

Query: 64  NLYLTVVLNAIAEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTK 123
           NL+L VVLNA+AE+PA      LL+  GRK + I T WFSGFFC  G LM   G WK  +
Sbjct: 139 NLHLNVVLNAVAEMPAFTITALLLDKFGRKPLTIGTLWFSGFFCFAGCLMGGVGIWKVVR 198

Query: 124 TICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLP 183
            ICGILG+FGMAG Y+LL++Y AELFPT VRN  +G   Q+ ++GAI+APF+V++G +LP
Sbjct: 199 MICGILGIFGMAGTYNLLFIYTAELFPTVVRNVALGCATQSAQMGAILAPFIVVMGGALP 258

Query: 184 LMAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGE 215
              FA CG  GG++  + PETLN+PLYDTI GM+ GE
Sbjct: 259 FAVFASCGFVGGLLAFYLPETLNRPLYDTITGMKEGE 293

[Close]

BLAST of MC11g_new0200 vs. ExPASy TrEMBL
Match: B9SY49 (Organic cation transporter, putative OS=Ricinus communis OX=3988 GN=RCOM_0987060 PE=4 SV=1)

HSP 1 Score: 239 bits (610), Expect = 6.86e-73
Identity = 127/213 (59.62%), Postives = 157/213 (73.71%), Query Frame = 0


Query: 9   QQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLT 68
           ++ I KKE     +LIDV I SPV R RLFL   +SF+C+++YYGLSLNVVNL TNLYLT
Sbjct: 312 KEKIAKKEAIA-GSLIDV-IQSPVTRVRLFLTVAISFLCSVVYYGLSLNVVNLDTNLYLT 371

Query: 69  VVLNAIAEIPA-----ALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTICGI 128
           V+LNA+AE+PA      LLN  GRK + + T WFSG FCL GSLM S G WK T+ ICG+
Sbjct: 372 VLLNAVAEMPAFTITAILLNKFGRKPLAVGTQWFSGLFCLTGSLMGSVGIWKVTRMICGL 431

Query: 129 LGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFA 188
           LG+FGMAG Y+LL++Y AELFPT VRN  +G   QA ++GAI+AP +V+LG  LP   FA
Sbjct: 432 LGIFGMAGTYNLLFIYTAELFPTVVRNAALGCATQAAQMGAILAPLVVVLGGGLPFAVFA 491

Query: 189 VCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 216
           VCGI GG +  + PETLN+PLYDT+ GME GE+
Sbjct: 492 VCGIMGGFLAFYLPETLNRPLYDTMTGMEDGES 522

[Close]

BLAST of MC11g_new0200 vs. TAIR 10
Match: AT3G20660.1 (organic cation/carnitine transporter4 )

HSP 1 Score: 207.6 bits (527), Expect = 1.0e-53
Identity = 110/217 (50.69%), Postives = 150/217 (69.12%), Query Frame = 0


Query: 5   DDVLQQAIRKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTN 64
           DD ++    ++ T    +L DV++ SP+ R RL ++  +SF  +I+YYGLSLNV NL+TN
Sbjct: 300 DDDVENNNGERNTAVEGSLKDVIL-SPLMRMRLVISVAISFTVSIVYYGLSLNVGNLKTN 359

Query: 65  LYLTVVLNAIAEIP-----AALLNILGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKT 124
           LYL V +NA++E+P     A LL+  GRK + I T WFS  FCLVG  +   G WK+ + 
Sbjct: 360 LYLNVFVNAVSEMPAFAITAVLLDKYGRKPLSIGTQWFSCVFCLVGFSVWGAGPWKSVRM 419

Query: 125 ICGILGMFGMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPL 184
           + G+LG+FGMAG Y+LL++Y AELFPT VRN  +G   QA ++GAI+APF+V+LGE LP 
Sbjct: 420 VSGVLGIFGMAGTYNLLFIYIAELFPTVVRNAALGCATQAAQMGAILAPFVVVLGEELPF 479

Query: 185 MAFAVCGIAGGVIVIFTPETLNKPLYDTILGMERGEA 217
             FAVCG+ GG +  + PETLNKPLYDT+ GM   E+
Sbjct: 480 GVFAVCGLVGGGLAFYLPETLNKPLYDTMFGMHEAES 515

[Close]

BLAST of MC11g_new0200 vs. TAIR 10
Match: AT1G73220.1 (organic cation/carnitine transporter1 )

HSP 1 Score: 111.7 bits (278), Expect = 7.4e-25
Identity = 69/194 (35.57%), Postives = 104/194 (53.61%), Query Frame = 0


Query: 36  RLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLNAIAEIPAA-----LLNILGRKGV 95
           R+ +     F    +YYG+ LN  NL  NLYLTV +NA+ E PA      LL ++ R+ +
Sbjct: 336 RIIMVMMAGFGSGFVYYGIQLNAENLNFNLYLTVAVNALMEFPAVFIGSFLLGVMNRRPL 395

Query: 96  GILTFWFSGFFCLVGSLMS------SDGGWKTTKTICGILGMFGMAGNYSLLYLYCAELF 155
              + + +GF CL+ +++S      +    K  +     +G    +  Y +LY+YC ELF
Sbjct: 396 FSNSSYLAGFACLLCAVLSIHRVIRAISVAKWLQLAVEAVGFMASSTAYDVLYVYCVELF 455

Query: 156 PTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFAVCGIA---GGVIVIFTPETLN 215
           PT VRNT V +  QA  +GA  AP LV LG    +M+F V G+A    G++ ++  ET N
Sbjct: 456 PTNVRNTAVSLLRQAFMLGASAAPLLVALGRESAMMSFIVFGVASVLSGIVSLWLRETRN 515

[Close]

BLAST of MC11g_new0200 vs. TAIR 10
Match: AT1G16390.1 (organic cation/carnitine transporter 3 )

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-13
Identity = 53/204 (25.98%), Postives = 98/204 (48.04%), Query Frame = 0


Query: 13  RKKETTTLSNLIDVMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLN 72
           + K    + + + +++    +  RL  A  + F   ++YYG+ L + NL  NLYL VV N
Sbjct: 302 QSKSNPDVYDALKILVRKSWSFRRLLAAMVVGFGIGMVYYGMPLALTNLNFNLYLGVVFN 361

Query: 73  AIAEIPAALLNI-----LGRKGVGILTFWFSGFFCLVGSLMSSDGGWKTTKTICGILGMF 132
           A++E PA L+       + R+   I     SG    + +++    G  + + +  ++  F
Sbjct: 362 ALSEFPAFLITFFFIDKINRRDALIGFTALSGISSALIAVLGQQLG--SLQIVLELVSFF 421

Query: 133 GMAGNYSLLYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFAVCGI 192
                +++  +Y  E+FPT VRN+ + M  QA+  G + +P +V  G      ++ + G+
Sbjct: 422 SACTAFNMTLIYTIEMFPTCVRNSAISMVRQALVFGGVFSPVMVAAGRENQFWSYGLFGL 481

Query: 193 AGGVIVIFT---PETLNKPLYDTI 209
             G+  +F    PET    L DT+
Sbjct: 482 IIGLCGLFVFGLPETRGSVLCDTM 503

[Close]

BLAST of MC11g_new0200 vs. TAIR 10
Match: AT1G79360.1 (organic cation/carnitine transporter 2 )

HSP 1 Score: 72.0 bits (175), Expect = 6.5e-13
Identity = 54/196 (27.55%), Postives = 93/196 (47.45%), Query Frame = 0


Query: 26  VMIHSPVARGRLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLNAIAEIPAALLNI- 85
           V++    A  RL     ++F   ++YYG+ L + NL  N+YL+   NA+ ++PA L+ + 
Sbjct: 316 VLVEKRWALKRLSAVMAIAFGIGLVYYGMPLALSNLDFNIYLSAAFNALMDLPANLITLF 375

Query: 86  ----LGRKGVGILTFWFSG-----FFCLVGSLMSSDGGWKTTKTICGILGMFGMAGNYSL 145
               L R+   I      G      F L    + + G     +    ++  F     +++
Sbjct: 376 LVDKLSRRNALIGFTALGGVSSVLIFALHNMRIGNHG---ALQLALELISYFSACSAFNM 435

Query: 146 LYLYCAELFPTEVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFAVCGIAGGVIVIF 205
             +Y  ELFPT VRN+ + M  QA+ +G + +P +V  G      +F + G+A G++ +F
Sbjct: 436 EMIYTIELFPTCVRNSAIAMARQALVLGGVFSPIMVAAGRKNAFWSFGLFGLAIGLLGLF 495

Query: 206 T---PETLNKPLYDTI 209
               PET    L DT+
Sbjct: 496 AVGLPETRGSDLCDTM 508

[Close]

BLAST of MC11g_new0200 vs. TAIR 10
Match: AT1G16370.1 (organic cation/carnitine transporter 6 )

HSP 1 Score: 70.9 bits (172), Expect = 1.5e-12
Identity = 59/190 (31.05%), Postives = 92/190 (48.42%), Query Frame = 0


Query: 36  RLFLASGMSFMCAIMYYGLSLNVVNLRTNLYLTVVLNAIAEIPA-----ALLNILGRKG- 95
           R+ +   + F   I YYG+ L   ++  N+YL+  LNA+ E+P       LL    R+  
Sbjct: 326 RILVVMIIMFGLGISYYGVPLAARDIDVNIYLSETLNALVELPTFVITPILLERFNRRSS 385

Query: 96  --VGILTFWFSGFFCLVGSLMSSDGGWKTTKTICGILGMFGMAG-NYSLLYLYCAELFPT 155
             V  L    SG  C V S++      KT       LG F  A   ++L+ ++  E+FPT
Sbjct: 386 VLVNTLLGGASGVLCFVLSILG-----KTEIAFAFELGTFFCARIGFNLMAVFMVEMFPT 445

Query: 156 EVRNTMVGMTMQAIEVGAIVAPFLVLLGESLPLMAFAVCGIAG---GVIVIFTPETLNKP 214
            VR++   M  QA+ VG    P +  +G  +P ++FA+ GIA    G+ V+  PET    
Sbjct: 446 CVRSSATMMFRQALVVGGACCPLIASIGRYIPSVSFAIFGIAMSGLGMFVLILPETKGLS 505

The following BLAST results are available for this feature:

BLAST of MC11g_new0200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHQ6	1.4e-52	50.69	Organic cation/carnitine transporter 4 OS=Arabidopsis thaliana OX=3702 GN=OCT4 P...	[more]
Q9CAT6	1.0e-23	35.57	Organic cation/carnitine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=OCT1 P...	[more]
Q28ES4	2.6e-22	32.62	Solute carrier family 22 member 15-like OS=Xenopus tropicalis OX=8364 GN=slc22a1...	[more]
Q7ZX53	4.4e-22	29.73	Solute carrier family 22 member 15-like OS=Xenopus laevis OX=8355 GN=slc22a15b P...	[more]
Q6NUB3	5.4e-20	30.95	Solute carrier family 22 member 15 OS=Xenopus laevis OX=8355 GN=slc22a15 PE=2 SV...	[more]

BLAST of MC11g_new0200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022139620.1	2.20e-143	100.00	organic cation/carnitine transporter 4-like [Momordica charantia] >XP_022139621....	[more]
XP_022139675.1	7.37e-124	85.07	organic cation/carnitine transporter 4-like [Momordica charantia]	[more]
XP_022142755.1	2.82e-74	57.14	organic cation/carnitine transporter 4-like, partial [Momordica charantia]	[more]
XP_023546283.1	2.58e-73	58.25	organic cation/carnitine transporter 4-like [Cucurbita pepo subsp. pepo]	[more]
XP_002530918.1	1.42e-72	59.62	organic cation/carnitine transporter 4 [Ricinus communis] >EEF31467.1 Organic ca...	[more]

BLAST of MC11g_new0200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CCT7	1.07e-143	100.00	organic cation/carnitine transporter 4-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CCZ1	3.57e-124	85.07	organic cation/carnitine transporter 4-like OS=Momordica charantia OX=3673 GN=LO...	[more]
A0A6J1CLU1	1.36e-74	57.14	organic cation/carnitine transporter 4-like OS=Momordica charantia OX=3673 GN=LO...	[more]
U7DZ61	6.84e-73	56.68	MFS domain-containing protein (Fragment) OS=Populus trichocarpa OX=3694 GN=POPTR...	[more]
B9SY49	6.86e-73	59.62	Organic cation transporter, putative OS=Ricinus communis OX=3988 GN=RCOM_0987060...	[more]

BLAST of MC11g_new0200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G20660.1	1.0e-53	50.69	organic cation/carnitine transporter4	[more]
AT1G73220.1	7.4e-25	35.57	organic cation/carnitine transporter1	[more]
AT1G16390.1	1.3e-13	25.98	organic cation/carnitine transporter 3	[more]
AT1G79360.1	6.5e-13	27.55	organic cation/carnitine transporter 2	[more]
AT1G16370.1	1.5e-12	31.05	organic cation/carnitine transporter 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 5..207 e-value: 1.7E-19 score: 71.9
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 33..204
None	No IPR available	PANTHER	PTHR24064	SOLUTE CARRIER FAMILY 22 MEMBER	coord: 20..216
None	No IPR available	PANTHER	PTHR24064:SF529	ORGANIC CATION/CARNITINE TRANSPORTER 4	coord: 20..216

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0200.1	MC11g_new0200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0022857	transmembrane transporter activity