MC11g_new0198 (gene) Bitter gourd (Dali-11) v1

Overview
NameMC11g_new0198
Typegene
OrganismMomordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
DescriptionUnknown protein
LocationMC11: 7906021 .. 7911047 (+)
RNA-Seq ExpressionMC11g_new0198
SyntenyMC11g_new0198
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
AATTTTTATTGTTCATCCGTGAGTCTTTTCCTGGAGAAAGAAATATGAAGTTTAAATTCTATCTTTAACATTGGTTGCGCATGGGATGGCAAATGAGAGACATTCAAGTAAAAGCAATTGTGTAAGTTTTGTTATTGGCTTTGCATTTCTCTTATTTCTTTCATTTATTTGTTTTCTTCTTTTTTCACCTTCAGGTTTTCCTCTATATGTAGACGTGAAATACTATTAGTGCAAAAGCTTCCAGTGGAAAGTTTCTGGAAGCTTTTTCATATGCATTGTTTTCCATTCTTACTGGTTTTGGTTTCATGTTGGGCTGCATTAAGGCCCATCCCTCAAGCTGAAACTGTAGTCCTGCTGGTATCCTTGTTCTTCTGTTTAATAATTAATTCTTAGAATGAAATGACAATTTCGGATCCAATACTTTGAGATCGTTCAGCCTAATTTTTTTTCTAGAAAGTTGTCCCCTTTGAGGATTAAAGAAATTTCTCTTTTCAATCTCTCAATTTCTGTTCTCCCTTCGGTTTCTTTATAAGAGTCACCGAGTAAGACTGCATATGCTCTAATAGTCTATTTGATGTCCTGTTTCCGAGCAAGAATTGAACAGTGACAATATTTGCTGCCTATAATGAAGTTTCAGTTGCAAGTTGCACATGTTGGAACTTCAAATTCTTTTTAATATTTAAGCGGCTTCTAGTATTATATGAATATTTATCTTTACCACTGTGATTTGAATATCAGTTTTTACTGCCTTAAATTACATTAAATTTTAATGAGATTCTCACAAGACCAAGTGCGCGAGACAATCCATGCAGGAGGAAAGTAAAGGTCTGTTGTACATTTTTCTTCTGCTTTTATTATGTTAACTTTAATTGGATGATGCAGCCTTTGAAAGGATTTAACATTCAATGCTATTATCAGTTCTTTGACATTCTAGTAGTGGTTTTTGCACACGTTAAAAATTCCTGTCTAGGTACTTGTAATCCTTACCTTCCATCAGATGAACGTATGGACGACTCACTTCACCAAAGAAAGAGCGGTGTGGGGTCATTTCTAAGTTGTGCTTAGGTACATCCACATCTTCATGAGATAAATTAGGGAGAGAGGAGGGAGTGGGGGGGCCAAAAGTAGTATGCTTAGGAAGACATAATTATGCAACCCTTTTTCATTCTTTTATGGGGGTTGACAGTAGAGACATGACACACCACTTTCCTCTCTTTTTAGATGCATTTGAAATGGGGCCAACATTCTCTCTCATACCCCATGTCTGTTTGCAACACCTCACCAACCGTGCACGGTTTCAAATATTTATTGGTCAAACACATTACATTGGAAGAAAAAACATGCTTATATCTCCATGTTCTATAACACTTCCAGGCATACTGGTAATACTGTATCAGCACAGAGAAACACTGTTTTCCAGCATATTTTCTTGTGTACATATTTTTTCAACTGCTGCATGAATATGTTCCCCACCATTACCCCCTCTGTATGTCATATAAATCCCTATCCACTGGTCACTCCATTTTCTCAGAAAAGAAATGTGAAAAGTTGAAAGAGGGAGAGAGAGAGAGACAGAAACTCACAAAAAAGGAAGCTTTAATATGCCCCTTGTTCTATATTAGATTTTTATCATGTTCTAAAAGAGATACTTTTCTTGCGTACTTGTGGTCAAGCAGGTGTTCATGCTGTAAGGACCCACTGGCTATCCTATCAAGCGACACGAAGCGATGGGCTGAAAGGTTAAAACCTAAGAAGCCATATTTCTCTTTAGTATTGGACATAAACTTCATGGTCTAATCACTTCGATGCTTTGAATTTTCTTTTGTAGGAACCAGAAACAAATATTATATTAATTCCAAGCACTAAGCTTAGTGATGGAAAATCGTTGCTTTGGAATCACAAAACCCTTTGTTGTCATCTTCATGATTTTTAAATCTCTTTTTGGTCCATCATGTCAGGTATTTCCTTTTTAAATTAATGTTTATCCTTTGCTACATGCTACACCATAATCAAAATGCATGTTATATGCCTCGCCACAAAGTGTTATCTAATCGTGGCCTTCAAAAGTAGCCGACCAACAGAAACTCAAAAACTCATATTATTGGTGATAACATGTGATTTGTGTCCTCAATCGCAGAAACCCATTGGCTGTATTTTCCTTTTTTTCCTTTCCTGTCTTTTTTAATTCTTATGTAAATATTACGAATCAGGGGCAATAACTTGCTAATGGTCTTTTTCTTACCTAATCAGGAAGTGTTCCTTAATAGTTGGTCTTCCGTTTGGTCAATGGAGTCATCATTATAGATCTGGCTTCCATTTTCTTATGTAAGAAACAATGTCATAATATTGGCAAAATGTTCCGTAGACACATCTAATCCGAACCTCACTTAAAATAAGATGTAGTGCTTAGAAGTAACGATATCCTGTAAAGTTAGAGATAAGATGTTTGATTAATGACTCCATTTGTTGGATGAACAAGAAGCTGAGTCCAGCTAGAACCCAGTTCTTAACTACATCATATTATGCTTTTTATTTAAAGCAATTTGATTTGAAATAAGCTTTTAACTCTAATATTCTATCATGTTTTTCACTCTTCTTATATTGTAGTCTGATGTGACAACAATTTGGTCCTATTAAATGTATTCTAGTTTACCTGAAGTTTAATATAATAATGCCTAAGCTCGACTTTTTCATTCTGGCTAAAACGGTCCTTGTGGTGCAAATTAGTGCTTGATGATTTGGATGTTCAGCATTGAATATCAAGTTATCCTATCATAAAAATGTGTAATCCCATTCTTGACAATATCTGGAAGCTTATGTTTCGTTATTCCCCAGCACAGACGCGTGGATAACCCCATGATTGAAAAGATTTAATGTCAATCATAAATCTTTAGGGGTACTTTTGGAAGGGGACTGTGCATTCGCACAAAATGTGGTGTTCCAAATCCGACATGATAGGCACACAGTGAAGCATTCAAAACTTTTTTGTTTCCAATTTTTTATATAGGAGGAATGGCGGAAAGGGAAAAAAAAGTTTAACATAGAGCACCTTATCCCAACTTGTAACATTTTAATTTTCATGGAGGAAGACAGATGTTTCTATTAGTTTATATATTTGCTTTCACCATCTGATTTCCACCCATAAAGGGGAATTTACTTTCTGCAGAAATTTTGTGACACTGTTTCATTTTCTTATCAAGGGGAGGCCGGCCATCATTTTCATTTGTAATGATGCTGATGACGATCCTGTTGTCGGGGAAAAACATGCATGGAATGAACTACGTGTCGATATGAGGGCAAATTAGCTCCGTGGAAATGGAGAGAGATTGGAAAGCATTGCAGAAATTAATCAAGTATGTGATAAGCCTTTATACTTATTTTTTTTGCTTTGTTTATTTATTTATTTTTTAGTTCTTCTAAATTTCCGTCGACAATTTTCTATCTAGATATTTTCATAATTACATCTACATTCATAATTGCATCTACATTTGACAAGGGATGAATCGACATTTTCATAGCATCATAAAAAATCTATAAAATATAATCTCGACATTTCTATCTATATCCACGTTTAAAATTGTTATGTTTAACCACTTTAAATTTCTGTTCATTTGGTTGCGATTGAGACGAACATTTCTTTACTCAGCATACTAAGTCTGAATTCATTGCATAGCACCGAAAGAATTTTAAGATTCCTTTTTGTTTTTTTCCCTTTATGTTATTCGGATTTTGTTGTGTGATTAAATGTGGGTCGAATAATCTAATTTTAATTGAAATAACAAATAGAGCAACCACCACCATTGTTATTTGCTGATTAAATATATGCTTTGGTTCTTAAATTATATACCATTTTTTATTTTCTAGTCTTTAATGTTTAAAAAAACTTCCAACTTAACAATATTATTAGAATTGAATGGACGGAATGATGGTACAAATATTTGAAGCGTCATGTGATATCGGATGGATCTTCTTACTTCTTATTAGGTGAGATAAAATTTGATTCTTAATTCATAAAGAGGTTAGTTTAATTTGACTTTAAATCAGGTTCAAGTAGAGTGAAATAGATGTTTAATATTTTGATTACCATTTACTCATAAAAACAATATTTTTTAAATATCACATTACATACCATTAGCTACTCCATAATCATTATTAAGGATATGATTTAAATTTTTTTAAACATATGTAGGATGAGAAATTGAAACTTTTGAGAACATCGAGGATGAGATGAAAGAATGATATATATATTTAGCCTTCTACTTTTACGTTTTTTATTTTTATTTTTATTTTTTTCTCTTCTACAGGATTTGTTTTGTGATATTATGATGTCTGAAATTTATTTAACCTCATCATGTGTATTCAGAAAGCAACAGTATTTTTACATGTGAAACTTGGCAGTGGCTTATAAAGGAGGATCAGGAACACAACACCTGGGAAGAGATATAGCTGAATTTCACCATATGCTTCAATTTTGTTTTGTGTTTCTGCTTTGAACATGATTGTTTAAGGTCATTAGTCTGTTTTGTTTTCTTGCTTTTGCATTGGATAATAATAATGAAAGTTGCATTGAATTAGCAGGTCAGAAAAAGCTGTGAGAGAGCCTCGAATCTGCCATGAATTGGAAGCTACGCCTTCAATTCCTATGGCCCTGCAGTGTCTCTATAAACTGGAGAAAATGGCTGTGTGAACCCATAATTTTGTGCCCCTTTCCAAGTGGGGAGCTGTGAATCAAACTGTCTATGGAAATAATAATTACCATTCATATTAGGCTAAGTTCAACATTTTGTATATATAAATTATAGGTTAAGTAGATCTCTGGCTTTGTTATAAAGATTGTGTTAGATCTCCTGGTGATGTTTCGAAAATTGTAATCCTCCTTTCGTTATCGGGTTGTGTTGTGTTTTAGCCTCGAGTTTAAGCTGTTGACTATTTTTAAGTAGGATGGTAGTGAGTTGGATATGTTACAAAATTAAAATAGGTTAAAATACTATTTTGGTTTATGTGCTTTCAATATTGGTTCATTTTAG

mRNA sequence

ATGGAAAATCGTTGCTTTGGAATCACAAAACCCTTTGTTGTCATCTTCATGATTTTTAAATCTCTTTTTGGTCCATCATGTCAGGGGAGGCCGGCCATCATTTTCATTTGTAATGATGCTGATGACGATCCTGTTGTCGGGGAAAAACATGCATGGAATGAACTACGTGTCGATATGAGGGCAAATTAG

Coding sequence (CDS)

ATGGAAAATCGTTGCTTTGGAATCACAAAACCCTTTGTTGTCATCTTCATGATTTTTAAATCTCTTTTTGGTCCATCATGTCAGGGGAGGCCGGCCATCATTTTCATTTGTAATGATGCTGATGACGATCCTGTTGTCGGGGAAAAACATGCATGGAATGAACTACGTGTCGATATGAGGGCAAATTAG

Protein sequence

MENRCFGITKPFVVIFMIFKSLFGPSCQGRPAIIFICNDADDDPVVGEKHAWNELRVDMRAN
Homology
[Close]
BLAST of MC11g_new0198 vs. NCBI nr
Match: XP_038896213.1 (uncharacterized protein LOC120084489 [Benincasa hispida])

HSP 1 Score: 90.5 bits (223), Expect = 1.38e-21
Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 0 

Query: 1   MENRCFGITKPFVVIFMIFKSLFGPSCQ-GRPAIIFICNDADDDPVVGEKHAWNELRVDM 59
           MENRCFGITKPF+VIFMIFKSLFGPSCQ G  A      D  DDP VG KHAWNE+RVDM
Sbjct: 50  MENRCFGITKPFLVIFMIFKSLFGPSCQAGHNA------DDVDDPFVGGKHAWNEVRVDM 103

[Close]
BLAST of MC11g_new0198 vs. NCBI nr
Match: KAG7024879.1 (hypothetical protein SDJN02_13698, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 79.0 bits (193), Expect = 4.96e-17
Identity = 42/62 (67.74%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 1   MENRCFGITKPFVVIFMIFKSLFGPSCQ----GRPAIIFICNDADDDPVVGEK-HAWNEL 57
           MENRCFGITK F+VIFMIFKS FGPSCQ    GR AII  CN+ADDDPVV E  H  N +
Sbjct: 59  MENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAII--CNNADDDPVVEENMHGMNYV 118

[Close]
BLAST of MC11g_new0198 vs. NCBI nr
Match: KAG6592004.1 (hypothetical protein SDJN03_14350, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 79.0 bits (193), Expect = 5.09e-17
Identity = 42/62 (67.74%), Postives = 46/62 (74.19%), Query Frame = 0 

Query: 1   MENRCFGITKPFVVIFMIFKSLFGPSCQ----GRPAIIFICNDADDDPVVGEK-HAWNEL 57
           MENRCFGITK F+VIFMIFKS FGPSCQ    GR AII  CN+ADDDPVV E  H  N +
Sbjct: 60  MENRCFGITKHFLVIFMIFKSPFGPSCQVIGKGRQAII--CNNADDDPVVEENMHGMNYV 119

The following BLAST results are available for this feature:
BLAST of MC11g_new0198 vs.
Match NameE-valueIdentityDescription
BLAST of MC11g_new0198 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038896213.11.38e-2175.00uncharacterized protein LOC120084489 [Benincasa hispida][more]
KAG7024879.14.96e-1767.74hypothetical protein SDJN02_13698, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6592004.15.09e-1767.74hypothetical protein SDJN03_14350, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of MC11g_new0198 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MC11g_new0198 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MC11g_new0198.1MC11g_new0198.1mRNA