MC11g_new0014 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g_new0014
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	ATP synthase subunit e, mitochondrial
Location	MC11: 872926 .. 874650 (-)
RNA-Seq Expression	MC11g_new0014
Synteny	MC11g_new0014

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAGAGGTCATTTACCAAAACTGCCCTCCACCGATTTGAGTTCAATATTCGTTGGGGCACGCCTCAGAGTGGTGCAATTGATAGGTGCTTCGGATCCAAAATTCCAGTGGAAATTAGGGTTTTACGATCCAGGTGGGAAAGGTGAACTCATTGACACTCGAAGGAGACGAGTCCAACCATTTCTGTGTAGCGACTGATACATTCATTTACATCTAATGGCGCCCCCTCCTGGCCCTTACTCCGGCACCAGCACTCTTGCTCTGGTATTTGCCTTTTCTTTTACCCCTAATCATCTGCAGAACTATTATCTTCTATATTTTCGATTTTTGTTGACCTCGATCCCTGTCATGTCCCGTGTCCAACTATTTTCTCAAAGGGTTCGGGGTGGTATTTAGATGCATCTAGATCTATCCCTTTTTTTCTCCCCGACCAACTGAATTCTCAACCGCATGGTAATTTGAGCGAATGGAACCTACGATAGGAAATTTTGGCTTTCGTTTTTGTACTAATTTGTCATATTATTTACAATCCTTTCTTGGGAATGAATTGGATCCATTCATTATAGATTCTGAGTTTTTTTCTCCCCTTTTATATCCCAATTTTTTTGGTATCGATTTCCTCAGGTAGCCCGAGCATCAGCATTCACCTTTGGTGTGGTTTACGGAAGCATTAAGCTCAAGGTTCTGAAGGTAAATTTGGATCAACTGCTGATGCCATTGCAGTTAGTAAATTCGTAGCAATGGTTATTTTTATGGGCATGATTTTGATTATATGATGCCTCTGTCTAAATCAACTCCATGTTCATTACAAGGTTGAAAATAATAGCAATCATGTTCTTCACTCATTGATTGACGTGAACGTGAATTCATATTTAACACCAAATTTCGTGTAATCCGATTCTTTAATAGTTTTTACTTGTTTTCTTCCGGAGACGATGGTTCTTCACTGCCTTATTTTGAATTTTCATCGGCATTTCTAATTTAAGAAACAAATCTTGTGGAAACTGTGGAAACTTAAAGCTTAAATATTGTGCAAGTTTATTGGTTTAGACGTGGTTATATAGTTATTTAGAAGCATTTAGCTCCGAAACATTTTTAGTGGATAAGAAAGTTTCTTCTCCTGGTTATGCGAACTTTCATGCTATGTTAATTACAGCACATAAACACGTGATGAAACATAGAGCTTCTGATGTACCTCAGTTCTTTTTTTTTAGTACAACATATAACGACGAAGATTTGAATTTACGACTTTTTAGTCGGAGATAGGTACCTTAACTAGTTGTCAAGTAGTTAGTTAATAGTATAGAATATGAATTTGATTACGGCGTTATCTTTTGGTTGTATTTTTGTACATTTGCCAGGCAAAGGCCAAGTCACATGCGAAAGCTGAAGCCAAGGCCCATCATTGATGGACACATTTACTGATGTAGCTTGTAGCGATGGAAGAGATGGAGAAAAATGTCACATAGGAGATCGACTCTGATCATTGTTTGAGGAAGTTTGATTTTTGGCTTGATAATTCATCAGATTATGCTTTTTACTGCTGAAACAAAAGAAATTTACTTTGTTTAAACAAGGTTGGTATTGCAAGTTCTGTACGGTGTATGCTTAGTTTTTCAGTTCCTATTGGCAAATTCTGCCTATGACAAGGATATCTTAAAATAAATGTGATACACCATCCTTTAAATAAGGCTCGTTTGAGATTTTTTCCCTATCATTGTCACCG

mRNA sequence

ATGGCGCCCCCTCCTGGCCCTTACTCCGGCACCAGCACTCTTGCTCTGGTAGCCCGAGCATCAGCATTCACCTTTGGTGTGGTTTACGGAAGCATTAAGCTCAAGGTTCTGAAGGCAAAGGCCAAGTCACATGCGAAAGCTGAAGCCAAGGCCCATCATTGA

Coding sequence (CDS)

ATGGCGCCCCCTCCTGGCCCTTACTCCGGCACCAGCACTCTTGCTCTGGTAGCCCGAGCATCAGCATTCACCTTTGGTGTGGTTTACGGAAGCATTAAGCTCAAGGTTCTGAAGGCAAAGGCCAAGTCACATGCGAAAGCTGAAGCCAAGGCCCATCATTGA

Protein sequence

MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH

Homology

[Close]

BLAST of MC11g_new0014 vs. NCBI nr
Match: XP_022132454.1 (uncharacterized protein LOC111005275 [Momordica charantia])

HSP 1 Score: 101 bits (251), Expect = 8.75e-27
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. NCBI nr
Match: XP_038898502.1 (uncharacterized protein LOC120086120 [Benincasa hispida])

HSP 1 Score: 97.1 bits (240), Expect = 4.18e-25
Identity = 51/53 (96.23%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MA PPGPYSGTSTLALVARASAFTFG+VYGSIKLKVLKAKAKSHAKAEAKAHH
Sbjct: 1  MATPPGPYSGTSTLALVARASAFTFGLVYGSIKLKVLKAKAKSHAKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. NCBI nr
Match: KAG2689214.1 (hypothetical protein I3760_09G129700 [Carya illinoinensis] >KAG6642297.1 hypothetical protein CIPAW_09G132900 [Carya illinoinensis] >KAG6696106.1 hypothetical protein I3842_09G130800 [Carya illinoinensis] >KAG7963641.1 hypothetical protein I3843_09G128500 [Carya illinoinensis])

HSP 1 Score: 97.1 bits (240), Expect = 4.18e-25
Identity = 49/53 (92.45%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAFTFGVVYGS+KLK+LKAKAKSH KA+AKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSLKLKILKAKAKSHQKAQAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. NCBI nr
Match: XP_008466504.1 (PREDICTED: uncharacterized protein LOC103503894 [Cucumis melo])

HSP 1 Score: 95.9 bits (237), Expect = 1.20e-24
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAFTFG+VYG+IKLKVLKAKAKS AKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. NCBI nr
Match: XP_004147837.1 (uncharacterized protein LOC101217057 [Cucumis sativus])

HSP 1 Score: 95.5 bits (236), Expect = 1.71e-24
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAF+FG+VYGSIKLKVLKAKAKS AKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. ExPASy TrEMBL
Match: A0A6J1BT37 (ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC111005275 PE=3 SV=1)

HSP 1 Score: 101 bits (251), Expect = 4.23e-27
Identity = 53/53 (100.00%), Postives = 53/53 (100.00%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. ExPASy TrEMBL
Match: A0A1S3CRK7 (uncharacterized protein LOC103503894 OS=Cucumis melo OX=3656 GN=LOC103503894 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 5.82e-25
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAFTFG+VYG+IKLKVLKAKAKS AKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGLVYGNIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. ExPASy TrEMBL
Match: A0A0A0LH44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866500 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.27e-25
Identity = 50/53 (94.34%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAF+FG+VYGSIKLKVLKAKAKS AKAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKVLKAKAKSRAKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. ExPASy TrEMBL
Match: A0A2N9G4U9 (ATP synthase subunit e, mitochondrial OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25569 PE=3 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 1.67e-24
Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAF+FG+VYGSIKLK LKAKAKSH KAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFSFGLVYGSIKLKYLKAKAKSHQKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. ExPASy TrEMBL
Match: A0A067H1L4 (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g0354532mg PE=4 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 2.37e-24
Identity = 47/53 (88.68%), Postives = 52/53 (98.11%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 53
          MAPPPGPYSGTSTLALVARASAFTFGVVYG++KLK+LK KAK+H+KAEAKAHH
Sbjct: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGNMKLKILKMKAKTHSKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. TAIR 10
Match: AT3G01130.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 3.8e-15
Identity = 41/53 (77.36%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 54
          MAPPPG YSGTSTLALVARASAF  G++YG+IKLK LK K  S  KAEAKAHH
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKIKKNSQIKAEAKAHH 53

[Close]

BLAST of MC11g_new0014 vs. TAIR 10
Match: AT5G15320.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 67.8 bits (164), Expect = 3.0e-12
Identity = 37/53 (69.81%), Postives = 42/53 (79.25%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 54
          M  PPG YSGTS+LALVARASAF  G+VYG++KLKVLK K+ S  K EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKVLKIKSMSQKKVEATAHH 53

[Close]

BLAST of MC11g_new0014 vs. TAIR 10
Match: AT3G01130.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G15320.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 1.3e-10
Identity = 32/40 (80.00%), Postives = 35/40 (87.50%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAK 41
          MAPPPG YSGTSTLALVARASAF  G++YG+IKLK LK K
Sbjct: 1  MAPPPGLYSGTSTLALVARASAFGLGLIYGNIKLKALKHK 40

[Close]

BLAST of MC11g_new0014 vs. TAIR 10
Match: AT5G15320.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 59.3 bits (142), Expect = 1.1e-09
Identity = 34/53 (64.15%), Postives = 40/53 (75.47%), Query Frame = 0


Query: 1  MAPPPGPYSGTSTLALVARASAFTFGVVYGSIKLKVLKAKAKSHAKAEAKAHH 54
          M  PPG YSGTS+LALVARASAF  G+VYG++KLK+   K+ S  K EA AHH
Sbjct: 1  MTLPPGLYSGTSSLALVARASAFGLGLVYGNMKLKI---KSMSQKKVEATAHH 50

The following BLAST results are available for this feature:

BLAST of MC11g_new0014 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g_new0014 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022132454.1	8.75e-27	100.00	uncharacterized protein LOC111005275 [Momordica charantia]	[more]
XP_038898502.1	4.18e-25	96.23	uncharacterized protein LOC120086120 [Benincasa hispida]	[more]
KAG2689214.1	4.18e-25	92.45	hypothetical protein I3760_09G129700 [Carya illinoinensis] >KAG6642297.1 hypothe...	[more]
XP_008466504.1	1.20e-24	94.34	PREDICTED: uncharacterized protein LOC103503894 [Cucumis melo]	[more]
XP_004147837.1	1.71e-24	94.34	uncharacterized protein LOC101217057 [Cucumis sativus]	[more]

BLAST of MC11g_new0014 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BT37	4.23e-27	100.00	ATP synthase subunit e, mitochondrial OS=Momordica charantia OX=3673 GN=LOC11100...	[more]
A0A1S3CRK7	5.82e-25	94.34	uncharacterized protein LOC103503894 OS=Cucumis melo OX=3656 GN=LOC103503894 PE=...	[more]
A0A0A0LH44	8.27e-25	94.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G866500 PE=4 SV=1	[more]
A0A2N9G4U9	1.67e-24	92.45	ATP synthase subunit e, mitochondrial OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25...	[more]
A0A067H1L4	2.37e-24	88.68	Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g0354532mg PE=4 SV=...	[more]

BLAST of MC11g_new0014 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01130.1	3.8e-15	77.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.1	3.0e-12	69.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G01130.2	1.3e-10	80.00	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G15320.2	1.1e-09	64.15	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008386	ATP synthase, F0 complex, subunit E, mitochondrial	PFAM	PF05680	ATP-synt_E	coord: 12..51 e-value: 1.0E-4 score: 22.6
None	No IPR available	PANTHER	PTHR36028:SF4	SUBFAMILY NOT NAMED	coord: 1..53
None	No IPR available	PANTHER	PTHR36028	OSJNBB0050O03.8 PROTEIN	coord: 1..53

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g_new0014.1	MC11g_new0014.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015986	ATP synthesis coupled proton transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0000276	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o)
molecular_function	GO:0015078	proton transmembrane transporter activity