MC11g1463 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1463
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Domain of unknown function (DUF543)
Location	MC11: 19715828 .. 19716633 (+)
RNA-Seq Expression	MC11g1463
Synteny	MC11g1463

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAGAACAACGGGCGTGATTTGAATGCCAAGTGGGACGCTTGCCTTGATTTGACGCTGCGTCGATTCGTCTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGTAATTCCTCCTCAACATTTTCTCTTTTCTTTTTACTTCTATCTTCTTTTATCTTTTAAAGCTTTCCTGGGTGGTGACCACCCATATGTTAGAAATTTGCCGACTATCGATTCGGAATGCCTGTTTATCTGCAAATGAAACACTTATGTTACGAAATCTGCCAATTTTTATTCTCTGATGAGACGGTAAACTTACCTAATTGAGGTCGTCACAGATGTCTGCGGTTGAGCTTTTTCTCTGCGCTATTTGTGTAACAATTTCTAAGTATCGGGTATAGATCGCGCGGATGCTAGCACAAATATTGGAGTGTACTTTCGGTTTATATTAGATAGGGTGTATTGCATTTTGAATATCAGGATATCCTACATTTGTGTAAAGCAAACTCGTGAATTTGGATCCACTTCACGCCTCTTTGGTTGGTGATATTGAGGCACCTGAATTTATTATAATACCATTGTTTTATCATTTTTCTAGAACTCCAGTTGAATGATGTTAATTAATTTATTAATGAGCACTATATCTTGATTAACTACTAGGGAGTCCTGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGTATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACAGCAAAATTAGCATCTCCAAAACTCACAGAGTCTCACCCCTCACAGGTTTCTTTT

mRNA sequence

ATGGCTGAGAACAACGGGCGTGATTTGAATGCCAAGTGGGACGCTTGCCTTGATTTGACGCTGCGTCGATTCGTCTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGGAGTCCTGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGTATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACAGCAAAATTAGCATCTCCAAAACTCACAGAGTCTCACCCCTCACAGGTTTCTTTT

Coding sequence (CDS)

ATGGCTGAGAACAACGGGCGTGATTTGAATGCCAAGTGGGACGCTTGCCTTGATTTGACGCTGCGTCGATTCGTCTACTCTTCCTTGGCTGGTGCATTTGGCGGCCTCCTTTTCTTCAGGAGTCCTGTGACTCGTTGGGCATCTATAGCTTTTGGTGCTGGATTGGGTATTGGATCAGCATACACAGATTGTAATTCTTTATTTGAAGGTTCCACAGCAAAATTAGCATCTCCAAAACTCACAGAGTCTCACCCCTCACAGGTTTCTTTT

Protein sequence

MAENNGRDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSLFEGSTAKLASPKLTESHPSQVSF

Homology

[Close]

BLAST of MC11g1463 vs. NCBI nr
Match: XP_022155219.1 (uncharacterized protein LOC111022363 [Momordica charantia])

HSP 1 Score: 176 bits (446), Expect = 2.07e-55
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MAENNGRDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSA 60
          MAENNGRDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSA
Sbjct: 1  MAENNGRDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSA 60

Query: 61 YTDCNSLFEGSTAKLASPKLTESHPSQ 87
          YTDCNSLFEGSTAKLASPKLTESHPSQ
Sbjct: 61 YTDCNSLFEGSTAKLASPKLTESHPSQ 87

[Close]

BLAST of MC11g1463 vs. NCBI nr
Match: XP_038890568.1 (uncharacterized protein LOC120080085 isoform X1 [Benincasa hispida])

HSP 1 Score: 160 bits (406), Expect = 3.46e-49
Identity = 82/93 (88.17%), Postives = 84/93 (90.32%), Query Frame = 0


Query: 1  MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAEN G      DLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVLPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQV 88
          GIGSAYTDCNSLFEGSTAK ASPK+TE+ PSQV
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFASPKITEAQPSQV 93

[Close]

BLAST of MC11g1463 vs. NCBI nr
Match: XP_038890569.1 (uncharacterized protein LOC120080085 isoform X2 [Benincasa hispida])

HSP 1 Score: 159 bits (402), Expect = 1.25e-48
Identity = 81/92 (88.04%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAEN G      DLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVLPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQ 87
          GIGSAYTDCNSLFEGSTAK ASPK+TE+ PSQ
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFASPKITEAQPSQ 92

[Close]

BLAST of MC11g1463 vs. NCBI nr
Match: KAA0039215.1 (MICOS complex subunit Mic10 isoform X2 [Cucumis melo var. makuwa] >TYK00403.1 MICOS complex subunit Mic10 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 159 bits (401), Expect = 2.19e-48
Identity = 80/95 (84.21%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 1  MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAEN G      DLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLNAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQVSF 90
          GIGSAYTDCNSLF+GSTAK  SPK+TE+ PSQV F
Sbjct: 61 GIGSAYTDCNSLFQGSTAKFTSPKITEAQPSQVKF 95

[Close]

BLAST of MC11g1463 vs. NCBI nr
Match: XP_011656128.1 (uncharacterized protein LOC101210763 isoform X2 [Cucumis sativus] >KAE8649022.1 hypothetical protein Csa_007941 [Cucumis sativus])

HSP 1 Score: 158 bits (399), Expect = 3.57e-48
Identity = 80/95 (84.21%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 1  MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAEN G      DL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQVSF 90
          GIGSAYTDCNSLFEGSTAK  SPK+TE+ PSQV F
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQVKF 95

[Close]

BLAST of MC11g1463 vs. ExPASy TrEMBL
Match: A0A6J1DPL6 (uncharacterized protein LOC111022363 OS=Momordica charantia OX=3673 GN=LOC111022363 PE=3 SV=1)

HSP 1 Score: 176 bits (446), Expect = 1.00e-55
Identity = 87/87 (100.00%), Postives = 87/87 (100.00%), Query Frame = 0


Query: 1  MAENNGRDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSA 60
          MAENNGRDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSA
Sbjct: 1  MAENNGRDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSA 60

Query: 61 YTDCNSLFEGSTAKLASPKLTESHPSQ 87
          YTDCNSLFEGSTAKLASPKLTESHPSQ
Sbjct: 61 YTDCNSLFEGSTAKLASPKLTESHPSQ 87

[Close]

BLAST of MC11g1463 vs. ExPASy TrEMBL
Match: A0A5D3BKW9 (MICOS complex subunit Mic10 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00020 PE=3 SV=1)

HSP 1 Score: 159 bits (401), Expect = 1.06e-48
Identity = 80/95 (84.21%), Postives = 83/95 (87.37%), Query Frame = 0


Query: 1  MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAEN G      DLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLNAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQVSF 90
          GIGSAYTDCNSLF+GSTAK  SPK+TE+ PSQV F
Sbjct: 61 GIGSAYTDCNSLFQGSTAKFTSPKITEAQPSQVKF 95

[Close]

BLAST of MC11g1463 vs. ExPASy TrEMBL
Match: A0A1S3CAS1 (MICOS complex subunit Mic10 OS=Cucumis melo OX=3656 GN=LOC103498730 PE=3 SV=1)

HSP 1 Score: 155 bits (391), Expect = 2.87e-47
Identity = 78/92 (84.78%), Postives = 81/92 (88.04%), Query Frame = 0


Query: 1  MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAEN G      DLNAKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLNAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQ 87
          GIGSAYTDCNSLF+GSTAK  SPK+TE+ PSQ
Sbjct: 61 GIGSAYTDCNSLFQGSTAKFTSPKITEAQPSQ 92

[Close]

BLAST of MC11g1463 vs. ExPASy TrEMBL
Match: A0A0A0KUY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652290 PE=3 SV=1)

HSP 1 Score: 155 bits (393), Expect = 3.28e-47
Identity = 79/93 (84.95%), Postives = 82/93 (88.17%), Query Frame = 0


Query: 1  MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
          MAEN G      DL+AKWDACLDLTLRRFVYSS AGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 1  MAENKGVVPPPHDLSAKWDACLDLTLRRFVYSSFAGAFGGLLFFRSPVTRWASIAFGAGL 60

Query: 61 GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQV 88
          GIGSAYTDCNSLFEGSTAK  SPK+TE+ PSQV
Sbjct: 61 GIGSAYTDCNSLFEGSTAKFTSPKITEAQPSQV 93

[Close]

BLAST of MC11g1463 vs. ExPASy TrEMBL
Match: A0A6J1I917 (uncharacterized protein LOC111472604 OS=Cucurbita maxima OX=3661 GN=LOC111472604 PE=3 SV=1)

HSP 1 Score: 152 bits (385), Expect = 8.66e-46
Identity = 79/92 (85.87%), Postives = 80/92 (86.96%), Query Frame = 0


Query: 1   MAENNG-----RDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 60
           MAEN        DLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL
Sbjct: 43  MAENKEVVPPPHDLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGL 102

Query: 61  GIGSAYTDCNSLFEGSTAKLASPKLTESHPSQ 87
           GIGSAYTDCNSLFEGSTAK ASPK+T   PSQ
Sbjct: 103 GIGSAYTDCNSLFEGSTAKFASPKITGPQPSQ 134

[Close]

BLAST of MC11g1463 vs. TAIR 10
Match: AT1G22520.2 (Domain of unknown function (DUF543) )

HSP 1 Score: 128.3 bits (321), Expect = 3.2e-30
Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 0


Query: 8  DLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSL 67
          D+NAKWDACLDLT RRFVYSSL GAF GLLFFRSPVTRWASIAFGAG+GIGSAYTDC+ +
Sbjct: 12 DVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRV 71

Query: 68 FEGSTAK----LASPKLTESHPSQVS 90
          F+ S++     LA+PK TE+  SQVS
Sbjct: 72 FDASSSTSATLLAAPKSTETSVSQVS 97

[Close]

BLAST of MC11g1463 vs. TAIR 10
Match: AT1G22520.1 (Domain of unknown function (DUF543) )

HSP 1 Score: 125.6 bits (314), Expect = 2.1e-29
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 8  DLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSL 67
          D+NAKWDACLDLT RRFVYSSL GAF GLLFFRSPVTRWASIAFGAG+GIGSAYTDC+ +
Sbjct: 12 DVNAKWDACLDLTARRFVYSSLGGAFAGLLFFRSPVTRWASIAFGAGIGIGSAYTDCSRV 71

Query: 68 FEGSTAK----LASPKLTESHPSQVS 90
          F+ S++     LA+PK TE+  SQ +
Sbjct: 72 FDASSSTSATLLAAPKSTETSVSQAA 97

[Close]

BLAST of MC11g1463 vs. TAIR 10
Match: AT1G72170.1 (Domain of unknown function (DUF543) )

HSP 1 Score: 120.2 bits (300), Expect = 8.7e-28
Identity = 60/83 (72.29%), Postives = 70/83 (84.34%), Query Frame = 0


Query: 8  DLNAKWDACLDLTLRRFVYSSLAGAFGGLLFFRSPVTRWASIAFGAGLGIGSAYTDCNSL 67
          D+NAKWDACLDLT+RRFVYSSL GAF GLLFFRSPVTRWASIA GAG+GIGSAY+DC+  
Sbjct: 13 DVNAKWDACLDLTVRRFVYSSLGGAFAGLLFFRSPVTRWASIALGAGIGIGSAYSDCSRA 72

Query: 68 FE---GSTAKLASPK--LTESHP 86
          F+    S+A LA+PK  +TE+ P
Sbjct: 73 FDSPSSSSANLAAPKNNITETSP 95

The following BLAST results are available for this feature:

BLAST of MC11g1463 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g1463 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155219.1	2.07e-55	100.00	uncharacterized protein LOC111022363 [Momordica charantia]	[more]
XP_038890568.1	3.46e-49	88.17	uncharacterized protein LOC120080085 isoform X1 [Benincasa hispida]	[more]
XP_038890569.1	1.25e-48	88.04	uncharacterized protein LOC120080085 isoform X2 [Benincasa hispida]	[more]
KAA0039215.1	2.19e-48	84.21	MICOS complex subunit Mic10 isoform X2 [Cucumis melo var. makuwa] >TYK00403.1 MI...	[more]
XP_011656128.1	3.57e-48	84.21	uncharacterized protein LOC101210763 isoform X2 [Cucumis sativus] >KAE8649022.1 ...	[more]

BLAST of MC11g1463 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPL6	1.00e-55	100.00	uncharacterized protein LOC111022363 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A5D3BKW9	1.06e-48	84.21	MICOS complex subunit Mic10 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CAS1	2.87e-47	84.78	MICOS complex subunit Mic10 OS=Cucumis melo OX=3656 GN=LOC103498730 PE=3 SV=1	[more]
A0A0A0KUY2	3.28e-47	84.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652290 PE=3 SV=1	[more]
A0A6J1I917	8.66e-46	85.87	uncharacterized protein LOC111472604 OS=Cucurbita maxima OX=3661 GN=LOC111472604...	[more]

BLAST of MC11g1463 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G22520.2	3.2e-30	74.42	Domain of unknown function (DUF543)	[more]
AT1G22520.1	2.1e-29	72.09	Domain of unknown function (DUF543)	[more]
AT1G72170.1	8.7e-28	72.29	Domain of unknown function (DUF543)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007512	MICOS complex subunit Mic10	PFAM	PF04418	DUF543	coord: 7..68 e-value: 7.1E-25 score: 86.7
IPR007512	MICOS complex subunit Mic10	PANTHER	PTHR21304	UNCHARACTERIZED	coord: 3..80
None	No IPR available	PANTHER	PTHR21304:SF8	MICOS COMPLEX SUBUNIT MIC10-LIKE PROTEIN (DUF543)	coord: 3..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1463.1	MC11g1463.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0061617	MICOS complex
cellular_component	GO:0005743	mitochondrial inner membrane