MC11g1456 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1456
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Stress induced protein
Location	MC11: 19498076 .. 19498282 (+)
RNA-Seq Expression	MC11g1456
Synteny	MC11g1456

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTGCATCAACCCAGGCCCTATTCACCACTCGACGAGGAACCAGAAGATCTCCGGCCAAATGGGTGCGGGTGTTTCCAGCTATTCGGCTTCAGATTCAACCGGAATGCCGATTACGAAGGTATAAATCTTCTACGGCGGGGAGAGGAATCTTGGATGGCTAGGAAATTGGAGAAGGTGAAGGAGGTCTCGGAGGTGGTGGCC

mRNA sequence

ATGGCGGTGCATCAACCCAGGCCCTATTCACCACTCGACGAGGAACCAGAAGATCTCCGGCCAAATGGGTGCGGGTGTTTCCAGCTATTCGGCTTCAGATTCAACCGGAATGCCGATTACGAAGGTATAAATCTTCTACGGCGGGGAGAGGAATCTTGGATGGCTAGGAAATTGGAGAAGGTGAAGGAGGTCTCGGAGGTGGTGGCC

Coding sequence (CDS)

ATGGCGGTGCATCAACCCAGGCCCTATTCACCACTCGACGAGGAACCAGAAGATCTCCGGCCAAATGGGTGCGGGTGTTTCCAGCTATTCGGCTTCAGATTCAACCGGAATGCCGATTACGAAGGTATAAATCTTCTACGGCGGGGAGAGGAATCTTGGATGGCTAGGAAATTGGAGAAGGTGAAGGAGGTCTCGGAGGTGGTGGCC

Protein sequence

MAVHQPRPYSPLDEEPEDLRPNGCGCFQLFGFRFNRNADYEGINLLRRGEESWMARKLEKVKEVSEVVA

Homology

[Close]

BLAST of MC11g1456 vs. NCBI nr
Match: XP_022135367.1 (uncharacterized protein LOC111007336 [Momordica charantia])

HSP 1 Score: 111 bits (277), Expect = 1.70e-29
Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPEDLRPNGCGCFQLFGFRFNRNADYEGINLLRRGEESWMAR 60
          MA HQPRP    YSPL+EEPED  PNGCGCF+LFGF F+RNAD EG NLLR GE SWMAR
Sbjct: 1  MAAHQPRPPPMPYSPLNEEPEDPPPNGCGCFRLFGFGFDRNADSEGRNLLR-GEGSWMAR 60

Query: 61 KLEKVKEVSEVVA 69
          KL+KVKEVSE+VA
Sbjct: 61 KLKKVKEVSEMVA 72

[Close]

BLAST of MC11g1456 vs. NCBI nr
Match: XP_038876901.1 (uncharacterized protein LOC120069255 [Benincasa hispida])

HSP 1 Score: 91.7 bits (226), Expect = 1.52e-21
Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPEDLRP-------NGCGCFQLFGFRFNRNADYEGINLLR-- 60
          MA HQ RP    YSPL+E+ +DL+        NGCGCF+LFGF FNRN +YE  NLL+  
Sbjct: 1  MATHQTRPPSTPYSPLNEQQDDLQDVDEAVPSNGCGCFRLFGFGFNRNGNYEPRNLLQQK 60

Query: 61 --RGEESWMARKLEKVKEVSEVVA 69
            R EESWM RKL+K+KEVSE+VA
Sbjct: 61 QGREEESWMVRKLKKMKEVSEMVA 84

[Close]

BLAST of MC11g1456 vs. NCBI nr
Match: XP_008443900.1 (PREDICTED: uncharacterized protein LOC103487383 [Cucumis melo] >KAA0050037.1 uncharacterized protein E6C27_scaffold675G00120 [Cucumis melo var. makuwa] >TYK03641.1 uncharacterized protein E5676_scaffold1369G00700 [Cucumis melo var. makuwa])

HSP 1 Score: 89.7 bits (221), Expect = 8.44e-21
Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPED--------LRPNGCGCFQLFGFRFNRNADYEGINLLR- 60
          MA HQ RP    YSPL+++ +D        +  NGCGCFQLFGF  NRN +YEG NLL+ 
Sbjct: 1  MASHQTRPPSTPYSPLNDQQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGANLLQQ 60

Query: 61 ---RGEESWMARKLEKVKEVSEVVA 69
             R EESWM +KL+KVKEVSE+VA
Sbjct: 61 KQGREEESWMVKKLKKVKEVSEMVA 85

[Close]

BLAST of MC11g1456 vs. NCBI nr
Match: XP_011648475.1 (uncharacterized protein LOC105434480 [Cucumis sativus] >KGN65215.1 hypothetical protein Csa_019625 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 3.31e-20
Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPEDLRP-------NGCGCFQLFGFRFNRNADYEGINLLR-- 60
          MA HQ RP    YSPL ++ +DL+        NGCGCFQLFGF  NRN +YEG NLL+  
Sbjct: 1  MATHQTRPPSTPYSPLTDQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGGNLLQQK 60

Query: 61 --RGEESWMARKLEKVKEVSEVVA 69
            R EESWM ++L+KV+EVSE+VA
Sbjct: 61 QGREEESWMVKRLKKVREVSEMVA 84

[Close]

BLAST of MC11g1456 vs. NCBI nr
Match: XP_023003195.1 (uncharacterized protein LOC111496880 [Cucurbita maxima])

HSP 1 Score: 87.0 bits (214), Expect = 9.41e-20
Identity = 48/84 (57.14%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 1  MAVHQ----PRPYSPLDEEPEDLRP-------NGCGCFQLFGFRFNRNADYEGINLLR-- 60
          MA HQ    P PYSPL+EE E L         NGC CFQLFGF FNRN +YE  NLL+  
Sbjct: 1  MATHQTRPPPTPYSPLNEEQEHLHDTDEAVPSNGCACFQLFGFGFNRNGNYEEGNLLQQQ 60

Query: 61 --RGEESWMARKLEKVKEVSEVVA 69
            R EE WM +KL+K+KEVSE+VA
Sbjct: 61 RGREEEFWMVKKLKKLKEVSEMVA 84

[Close]

BLAST of MC11g1456 vs. ExPASy TrEMBL
Match: A0A6J1C2H6 (uncharacterized protein LOC111007336 OS=Momordica charantia OX=3673 GN=LOC111007336 PE=4 SV=1)

HSP 1 Score: 111 bits (277), Expect = 8.24e-30
Identity = 56/73 (76.71%), Postives = 61/73 (83.56%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPEDLRPNGCGCFQLFGFRFNRNADYEGINLLRRGEESWMAR 60
          MA HQPRP    YSPL+EEPED  PNGCGCF+LFGF F+RNAD EG NLLR GE SWMAR
Sbjct: 1  MAAHQPRPPPMPYSPLNEEPEDPPPNGCGCFRLFGFGFDRNADSEGRNLLR-GEGSWMAR 60

Query: 61 KLEKVKEVSEVVA 69
          KL+KVKEVSE+VA
Sbjct: 61 KLKKVKEVSEMVA 72

[Close]

BLAST of MC11g1456 vs. ExPASy TrEMBL
Match: A0A5A7U6Q0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1369G00700 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.09e-21
Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPED--------LRPNGCGCFQLFGFRFNRNADYEGINLLR- 60
          MA HQ RP    YSPL+++ +D        +  NGCGCFQLFGF  NRN +YEG NLL+ 
Sbjct: 1  MASHQTRPPSTPYSPLNDQQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGANLLQQ 60

Query: 61 ---RGEESWMARKLEKVKEVSEVVA 69
             R EESWM +KL+KVKEVSE+VA
Sbjct: 61 KQGREEESWMVKKLKKVKEVSEMVA 85

[Close]

BLAST of MC11g1456 vs. ExPASy TrEMBL
Match: A0A1S3B8N4 (uncharacterized protein LOC103487383 OS=Cucumis melo OX=3656 GN=LOC103487383 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 4.09e-21
Identity = 48/85 (56.47%), Postives = 58/85 (68.24%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPED--------LRPNGCGCFQLFGFRFNRNADYEGINLLR- 60
          MA HQ RP    YSPL+++ +D        +  NGCGCFQLFGF  NRN +YEG NLL+ 
Sbjct: 1  MASHQTRPPSTPYSPLNDQQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGANLLQQ 60

Query: 61 ---RGEESWMARKLEKVKEVSEVVA 69
             R EESWM +KL+KVKEVSE+VA
Sbjct: 61 KQGREEESWMVKKLKKVKEVSEMVA 85

[Close]

BLAST of MC11g1456 vs. ExPASy TrEMBL
Match: A0A0A0LTG0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265630 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 1.60e-20
Identity = 47/84 (55.95%), Postives = 58/84 (69.05%), Query Frame = 0


Query: 1  MAVHQPRP----YSPLDEEPEDLRP-------NGCGCFQLFGFRFNRNADYEGINLLR-- 60
          MA HQ RP    YSPL ++ +DL+        NGCGCFQLFGF  NRN +YEG NLL+  
Sbjct: 1  MATHQTRPPSTPYSPLTDQQDDLQDIDDSISSNGCGCFQLFGFGSNRNRNYEGGNLLQQK 60

Query: 61 --RGEESWMARKLEKVKEVSEVVA 69
            R EESWM ++L+KV+EVSE+VA
Sbjct: 61 QGREEESWMVKRLKKVREVSEMVA 84

[Close]

BLAST of MC11g1456 vs. ExPASy TrEMBL
Match: A0A6J1KR34 (uncharacterized protein LOC111496880 OS=Cucurbita maxima OX=3661 GN=LOC111496880 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 4.56e-20
Identity = 48/84 (57.14%), Postives = 55/84 (65.48%), Query Frame = 0


Query: 1  MAVHQ----PRPYSPLDEEPEDLRP-------NGCGCFQLFGFRFNRNADYEGINLLR-- 60
          MA HQ    P PYSPL+EE E L         NGC CFQLFGF FNRN +YE  NLL+  
Sbjct: 1  MATHQTRPPPTPYSPLNEEQEHLHDTDEAVPSNGCACFQLFGFGFNRNGNYEEGNLLQQQ 60

Query: 61 --RGEESWMARKLEKVKEVSEVVA 69
            R EE WM +KL+K+KEVSE+VA
Sbjct: 61 RGREEEFWMVKKLKKLKEVSEMVA 84

The following BLAST results are available for this feature:

BLAST of MC11g1456 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g1456 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022135367.1	1.70e-29	76.71	uncharacterized protein LOC111007336 [Momordica charantia]	[more]
XP_038876901.1	1.52e-21	58.33	uncharacterized protein LOC120069255 [Benincasa hispida]	[more]
XP_008443900.1	8.44e-21	56.47	PREDICTED: uncharacterized protein LOC103487383 [Cucumis melo] >KAA0050037.1 unc...	[more]
XP_011648475.1	3.31e-20	55.95	uncharacterized protein LOC105434480 [Cucumis sativus] >KGN65215.1 hypothetical ...	[more]
XP_023003195.1	9.41e-20	57.14	uncharacterized protein LOC111496880 [Cucurbita maxima]	[more]

BLAST of MC11g1456 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C2H6	8.24e-30	76.71	uncharacterized protein LOC111007336 OS=Momordica charantia OX=3673 GN=LOC111007...	[more]
A0A5A7U6Q0	4.09e-21	56.47	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B8N4	4.09e-21	56.47	uncharacterized protein LOC103487383 OS=Cucumis melo OX=3656 GN=LOC103487383 PE=...	[more]
A0A0A0LTG0	1.60e-20	55.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G265630 PE=4 SV=1	[more]
A0A6J1KR34	4.56e-20	57.14	uncharacterized protein LOC111496880 OS=Cucurbita maxima OX=3661 GN=LOC111496880...	[more]

BLAST of MC11g1456 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1456.1	MC11g1456.1	mRNA