MC11g1437 (gene) Bitter gourd (Dali-11) v1

Overview


Name	MC11g1437
Type	gene
Organism	Momordica charantia cv. Dali-11 (Bitter gourd (Dali-11) v1)
Description	Transmembrane protein
Location	MC11: 19145205 .. 19145474 (+)
RNA-Seq Expression	MC11g1437
Synteny	MC11g1437

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTTTTTTGGTTTCCTTGTCTTTCTAGTGTTGGGAGATGAGCATTCAAGAGCCAAAGATTCTGATAACACTAAAAACGACGATGCCCGGAGGGGGCCGTCCTTGGGGATCAAGATAATAATCATATGTCTAGGAGTGGTGGCTGTCATTGCCTTTTCTGTGATCCTATTCAAGCTATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGACGACGATGAGCTCGAAGTCGAACTTGGCCTTCGGGAT

mRNA sequence

TCTTTTTTTGGTTTCCTTGTCTTTCTAGTGTTGGGAGATGAGCATTCAAGAGCCAAAGATTCTGATAACACTAAAAACGACGATGCCCGGAGGGGGCCGTCCTTGGGGATCAAGATAATAATCATATGTCTAGGAGTGGTGGCTGTCATTGCCTTTTCTGTGATCCTATTCAAGCTATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGACGACGATGAGCTCGAAGTCGAACTTGGCCTTCGGGAT

Coding sequence (CDS)

TCTTTTTTTGGTTTCCTTGTCTTTCTAGTGTTGGGAGATGAGCATTCAAGAGCCAAAGATTCTGATAACACTAAAAACGACGATGCCCGGAGGGGGCCGTCCTTGGGGATCAAGATAATAATCATATGTCTAGGAGTGGTGGCTGTCATTGCCTTTTCTGTGATCCTATTCAAGCTATGGCAAAAGAAGAAGAGAGAAGAACAACATGCCCGTCTTCTCAAGCTGTTTGAAGACGACGATGAGCTCGAAGTCGAACTTGGCCTTCGGGAT

Protein sequence

SFFGFLVFLVLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD

Homology

[Close]

BLAST of MC11g1437 vs. NCBI nr
Match: XP_038890666.1 (uncharacterized protein LOC120080166 [Benincasa hispida])

HSP 1 Score: 135 bits (340), Expect = 4.80e-39
Identity = 73/93 (78.49%), Postives = 79/93 (84.95%), Query Frame = 0


Query: 2   FFGFLVFL----VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILF 61
           FF FL+FL    VL ++HS AKD   +K DDARR PS+ IKIIIICLGVV VIAFSVILF
Sbjct: 14  FFVFLLFLHSLSVLANDHSSAKDGGKSKKDDARRSPSMVIKIIIICLGVVTVIAFSVILF 73

Query: 62  KLWQKKKREEQHARLLKLFEDDDELEVELGLRD 90
           K+WQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 74  KIWQKKKREEQHARLLKLFEDDDELEVELGLRD 106

[Close]

BLAST of MC11g1437 vs. NCBI nr
Match: KGN52701.1 (hypothetical protein Csa_009261 [Cucumis sativus])

HSP 1 Score: 130 bits (326), Expect = 6.72e-37
Identity = 67/81 (82.72%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           VL  E+S AKD   TK DDARR PS+GIKI+IICLGVV VI FSVILFK+WQKKKREEQH
Sbjct: 27  VLAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIIFSVILFKIWQKKKREEQH 86

Query: 70  ARLLKLFEDDDELEVELGLRD 90
           ARLLKLFEDDDELEVELGLRD
Sbjct: 87  ARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of MC11g1437 vs. NCBI nr
Match: XP_008459655.1 (PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo] >KAA0039241.1 uncharacterized protein E6C27_scaffold64G00300 [Cucumis melo var. makuwa])

HSP 1 Score: 130 bits (326), Expect = 6.72e-37
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           VL +++S AKD   TK DD RR PS+GIKI+IICLGVV VIAFSVILFK+WQKKKREEQH
Sbjct: 27  VLANDNSSAKDGGKTKKDDVRRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQH 86

Query: 70  ARLLKLFEDDDELEVELGLRD 90
           ARLLKLFEDDDELEVELGLRD
Sbjct: 87  ARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of MC11g1437 vs. NCBI nr
Match: XP_023525282.1 (uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 119 bits (299), Expect = 8.21e-33
Identity = 68/95 (71.58%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 2   FFGFLVFL------VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVI 61
           F  FL+ L      VL  +HS AKD   TK  DA + PS GIK++IICLGVV  IAFSVI
Sbjct: 12  FLSFLLSLSLHSLSVLAGDHSSAKDG-KTKKPDAPKSPSTGIKMLIICLGVVTFIAFSVI 71

Query: 62  LFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 90
           LFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 72  LFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 105

[Close]

BLAST of MC11g1437 vs. NCBI nr
Match: KAG6607498.1 (hypothetical protein SDJN03_00840, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 119 bits (299), Expect = 8.21e-33
Identity = 68/95 (71.58%), Postives = 73/95 (76.84%), Query Frame = 0


Query: 2   FFGFLVFL------VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVI 61
           F  FL+ L      VL  +HS AKD   TK  DA + PS GIK++IICLGVV  IAFSVI
Sbjct: 12  FLSFLLSLSLHSLSVLAGDHSSAKDG-KTKKHDAPKSPSTGIKMLIICLGVVTFIAFSVI 71

Query: 62  LFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 90
           LFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD
Sbjct: 72  LFKLWQKKKREEQHARLLKLFEDDDELEVELGLRD 105

[Close]

BLAST of MC11g1437 vs. ExPASy TrEMBL
Match: A0A5A7TC90 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00300 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 3.25e-37
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           VL +++S AKD   TK DD RR PS+GIKI+IICLGVV VIAFSVILFK+WQKKKREEQH
Sbjct: 27  VLANDNSSAKDGGKTKKDDVRRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQH 86

Query: 70  ARLLKLFEDDDELEVELGLRD 90
           ARLLKLFEDDDELEVELGLRD
Sbjct: 87  ARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of MC11g1437 vs. ExPASy TrEMBL
Match: A0A0A0KXZ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650624 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 3.25e-37
Identity = 67/81 (82.72%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           VL  E+S AKD   TK DDARR PS+GIKI+IICLGVV VI FSVILFK+WQKKKREEQH
Sbjct: 27  VLAKENSSAKDGGKTKKDDARRSPSMGIKILIICLGVVTVIIFSVILFKIWQKKKREEQH 86

Query: 70  ARLLKLFEDDDELEVELGLRD 90
           ARLLKLFEDDDELEVELGLRD
Sbjct: 87  ARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of MC11g1437 vs. ExPASy TrEMBL
Match: A0A1S3CA76 (uncharacterized protein LOC103498710 OS=Cucumis melo OX=3656 GN=LOC103498710 PE=4 SV=1)

HSP 1 Score: 130 bits (326), Expect = 3.25e-37
Identity = 66/81 (81.48%), Postives = 72/81 (88.89%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           VL +++S AKD   TK DD RR PS+GIKI+IICLGVV VIAFSVILFK+WQKKKREEQH
Sbjct: 27  VLANDNSSAKDGGKTKKDDVRRSPSMGIKILIICLGVVTVIAFSVILFKIWQKKKREEQH 86

Query: 70  ARLLKLFEDDDELEVELGLRD 90
           ARLLKLFEDDDELEVELGLRD
Sbjct: 87  ARLLKLFEDDDELEVELGLRD 107

[Close]

BLAST of MC11g1437 vs. ExPASy TrEMBL
Match: A0A6J1GB46 (uncharacterized protein LOC111452561 OS=Cucurbita moschata OX=3662 GN=LOC111452561 PE=4 SV=1)

HSP 1 Score: 117 bits (292), Expect = 4.63e-32
Identity = 63/81 (77.78%), Postives = 67/81 (82.72%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           VL  +HS AKD   TK  DA + PS GIK++IICLGVV  IAF VILFKLWQKKKREEQH
Sbjct: 26  VLAGDHSSAKDG-KTKKHDAPKSPSTGIKMLIICLGVVTFIAFYVILFKLWQKKKREEQH 85

Query: 70  ARLLKLFEDDDELEVELGLRD 90
           ARLLKLFEDDDELEVELGLRD
Sbjct: 86  ARLLKLFEDDDELEVELGLRD 105

[Close]

BLAST of MC11g1437 vs. ExPASy TrEMBL
Match: A0A6J1EBZ0 (uncharacterized protein LOC111432678 OS=Cucurbita moschata OX=3662 GN=LOC111432678 PE=4 SV=1)

HSP 1 Score: 113 bits (283), Expect = 1.15e-30
Identity = 60/82 (73.17%), Postives = 68/82 (82.93%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDN-TKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQ 69
           VL DEHS A++ D   K  D  R  S+GIKI++ICLGVV VIAFSVIL K+WQ+KKREEQ
Sbjct: 26  VLADEHSSAENGDGKAKKGDGWRSRSMGIKIVLICLGVVTVIAFSVILCKIWQRKKREEQ 85

Query: 70  HARLLKLFEDDDELEVELGLRD 90
           HARLLKLFEDDDELE+ELGLRD
Sbjct: 86  HARLLKLFEDDDELELELGLRD 107

[Close]

BLAST of MC11g1437 vs. TAIR 10
Match: AT1G09645.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G57765.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 83.6 bits (205), Expect = 9.1e-17
Identity = 45/75 (60.00%), Postives = 54/75 (72.00%), Query Frame = 0


Query: 20  DSDNT----KNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKL 79
           DS NT    K +        G K+I++ +G VAV  FS  L+KLWQKKKR+EQ+ARLLKL
Sbjct: 32  DSKNTNAGVKTESHTSSSKTGTKVILVLVGFVAVAMFSFFLYKLWQKKKRDEQYARLLKL 91

Query: 80  FEDDDELEVELGLRD 91
           FE+DDELEVELGLRD
Sbjct: 92  FEEDDELEVELGLRD 106

[Close]

BLAST of MC11g1437 vs. TAIR 10
Match: AT1G57765.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1); Has 68 Blast hits to 68 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           + GD +S    S   K +        G K+I I LG  AV   S  L+KLWQKKKR+EQ+
Sbjct: 30  ISGDPNS---SSTGAKAESHTSSSKTGTKVIFILLGFGAVAGLSFFLYKLWQKKKRDEQY 89

Query: 70  ARLLKLFEDDDELEVELGLRD 91
           ARLLKLFE+DDELEVELGLRD
Sbjct: 90  ARLLKLFEEDDELEVELGLRD 107

[Close]

BLAST of MC11g1437 vs. TAIR 10
Match: AT1G57765.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G09645.1). )

HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15
Identity = 45/81 (55.56%), Postives = 53/81 (65.43%), Query Frame = 0


Query: 10  VLGDEHSRAKDSDNTKNDDARRGPSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQH 69
           + GD +S    S   K +        G K+I I LG  AV   S  L+KLWQKKKR+EQ+
Sbjct: 40  ISGDPNS---SSTGAKAESHTSSSKTGTKVIFILLGFGAVAGLSFFLYKLWQKKKRDEQY 99

Query: 70  ARLLKLFEDDDELEVELGLRD 91
           ARLLKLFE+DDELEVELGLRD
Sbjct: 100 ARLLKLFEEDDELEVELGLRD 117

[Close]

BLAST of MC11g1437 vs. TAIR 10
Match: AT3G53490.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G02720.1); Has 70 Blast hits to 70 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 2.6e-08
Identity = 30/69 (43.48%), Postives = 49/69 (71.01%), Query Frame = 0


Query: 24  TKNDDARRG--PSLGIKIIIICLGVVAVIAFSVILFKLWQKKKREEQHARLLKLFEDDDE 83
           T+ ++ + G  P + + I+++ LGVVAV    ++ +K W+KKKR+++ AR LKLFED D+
Sbjct: 157 TEKEEQKGGMHPGIVVLIVVLLLGVVAV--GLLVGYKYWRKKKRQQEQARFLKLFEDGDD 216

Query: 84  LEVELGLRD 91
           +E ELGL +
Sbjct: 217 IEDELGLEN 223

The following BLAST results are available for this feature:

BLAST of MC11g1437 vs.


Match Name	E-value	Identity	Description

BLAST of MC11g1437 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038890666.1	4.80e-39	78.49	uncharacterized protein LOC120080166 [Benincasa hispida]	[more]
KGN52701.1	6.72e-37	82.72	hypothetical protein Csa_009261 [Cucumis sativus]	[more]
XP_008459655.1	6.72e-37	81.48	PREDICTED: uncharacterized protein LOC103498710 [Cucumis melo] >KAA0039241.1 unc...	[more]
XP_023525282.1	8.21e-33	71.58	uncharacterized protein LOC111788931 [Cucurbita pepo subsp. pepo]	[more]
KAG6607498.1	8.21e-33	71.58	hypothetical protein SDJN03_00840, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MC11g1437 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TC90	3.25e-37	81.48	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0KXZ0	3.25e-37	82.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650624 PE=4 SV=1	[more]
A0A1S3CA76	3.25e-37	81.48	uncharacterized protein LOC103498710 OS=Cucumis melo OX=3656 GN=LOC103498710 PE=...	[more]
A0A6J1GB46	4.63e-32	77.78	uncharacterized protein LOC111452561 OS=Cucurbita moschata OX=3662 GN=LOC1114525...	[more]
A0A6J1EBZ0	1.15e-30	73.17	uncharacterized protein LOC111432678 OS=Cucurbita moschata OX=3662 GN=LOC1114326...	[more]

BLAST of MC11g1437 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G09645.1	9.1e-17	60.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G57765.1	1.3e-15	55.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G57765.2	1.3e-15	55.56	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G53490.1	2.6e-08	43.48	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (Dali-11) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33780:SF2	OS05G0419600 PROTEIN	coord: 10..90
None	No IPR available	PANTHER	PTHR33780	EXPRESSED PROTEIN	coord: 10..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MC11g1437.1	MC11g1437.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane